Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32087 Sequoiadendron giganteum HOM05D000326 ORTHO05D003748 4.8e-70 267.7 134 100.0
Hma1.2p1_0660F.1_g197520 Hydrangea macrophylla HOM05D000326 ORTHO05D003748 7.5e-23 110.9 103 62.1
Nn1g03354 Nelumbo nucifera HOM05D000326 ORTHO05D003748 1.3e-22 110.2 103 60.2
Nitab4.5_0000143g0480 Nicotiana tabacum HOM05D000182 ORTHO05D003748 1.3e-22 110.2 82 70.7
Nitab4.5_0001198g0220 Nicotiana tabacum HOM05D000326 ORTHO05D003748 1.7e-22 109.8 82 70.7
Peaxi162Scf00990g00125 Petunia axillaris HOM05D000182 ORTHO05D003748 2.2e-22 109.4 82 68.3
Aqoxy1G04159 Aquilegia oxysepala HOM05D000326 ORTHO05D003748 2.9e-22 109.0 83 67.5
AUR62012777 Chenopodium quinoa HOM05D000326 ORTHO05D003748 3.7e-22 108.6 103 60.2
ECA248G1340 Erigeron canadensis HOM05D000326 ORTHO05D003748 3.7e-22 108.6 110 57.3
Gorai.009G182100 Gossypium raimondii HOM05D000326 ORTHO05D003748 3.7e-22 108.6 82 69.5
PGR004G1603 Punica granatum HOM05D000326 ORTHO05D003748 3.7e-22 108.6 103 58.3
CAN.G1186.14 Capsicum annuum HOM05D000182 ORTHO05D003748 6.4e-22 107.8 82 68.3
CAN.G1263.7 Capsicum annuum HOM05D000326 ORTHO05D003748 6.4e-22 107.8 82 68.3
Gohir.A05G173700 Gossypium hirsutum HOM05D000326 ORTHO05D003748 6.4e-22 107.8 82 68.3
Hund23413 Selenicereus undatus HOM05D000326 ORTHO05D003748 6.4e-22 107.8 82 70.7
Ah.14g087770 Amaranthus hybridus HOM05D000326 ORTHO05D003748 8.3e-22 107.5 82 68.3
COL.COLO4_31858 Corchorus olitorius HOM05D000326 ORTHO05D003748 8.3e-22 107.5 82 68.3
Haze_06896 Corylus avellana HOM05D000182 ORTHO05D003748 8.3e-22 107.5 103 62.1
Duzib192G0921 Durio zibethinus HOM05D000326 ORTHO05D003748 8.3e-22 107.5 103 59.2
Duzib235G0545 Durio zibethinus HOM05D000326 ORTHO05D003748 8.3e-22 107.5 106 58.5
Oeu002754.1 Olea europaea HOM05D000326 ORTHO05D003748 8.3e-22 107.5 82 69.5
QL03p008407 Quercus lobata HOM05D000326 ORTHO05D003748 8.3e-22 107.5 82 69.5
EL10Ac8g20163 Beta vulgaris HOM05D000326 ORTHO05D003748 1.1e-21 107.1 105 56.2
Gohir.D05G176700 Gossypium hirsutum HOM05D000326 ORTHO05D003748 1.1e-21 107.1 82 68.3
vmacro23325 Vaccinium macrocarpon HOM05D000326 ORTHO05D003748 1.1e-21 107.1 82 69.5
ATR1128G081 Amborella trichopoda HOM05D000326 ORTHO05D003748 1.4e-21 106.7 103 60.2
Cfa000128 Carpinus fangiana HOM05D000182 ORTHO05D003748 1.4e-21 106.7 82 70.7
DCAR_002211 Daucus carota HOM05D000326 ORTHO05D003748 1.4e-21 106.7 103 58.3
Dinv07384 Davidia involucrata HOM05D000326 ORTHO05D003748 1.4e-21 106.7 103 59.2
Atru.chr1.2493 Acer truncatum HOM05D000326 ORTHO05D003748 1.9e-21 106.3 103 59.2
Peaxi162Scf00558g00111 Petunia axillaris HOM05D000326 ORTHO05D003748 1.9e-21 106.3 82 67.1
QL05p069854 Quercus lobata HOM05D000182 ORTHO05D003748 1.9e-21 106.3 82 69.5
QL10p003427 Quercus lobata HOM05D000182 ORTHO05D003748 1.9e-21 106.3 82 69.5
CiPaw.10G076300 Carya illinoinensis HOM05D000182 ORTHO05D003748 2.4e-21 105.9 103 60.2
Lalb_Chr07g0177031 Lupinus albus HOM05D000326 ORTHO05D003748 2.4e-21 105.9 104 58.7
Sopen04g006770 Solanum pennellii HOM05D000326 ORTHO05D003748 2.4e-21 105.9 82 67.1
TWI38G0552 Tripterygium wilfordii HOM05D000326 ORTHO05D003748 2.4e-21 105.9 103 59.2
Gohir.D10G009900 Gossypium hirsutum HOM05D000326 ORTHO05D003748 3.2e-21 105.5 117 53.8
Gorai.011G010800 Gossypium raimondii HOM05D000326 ORTHO05D003748 3.2e-21 105.5 117 53.8
Peaxi162Scf00442g00526 Petunia axillaris HOM05D000326 ORTHO05D003748 4.1e-21 105.1 82 65.9
QL03p008385 Quercus lobata HOM05D000326 ORTHO05D003748 4.1e-21 105.1 103 59.2
QL05p069860 Quercus lobata HOM05D000326 ORTHO05D003748 4.1e-21 105.1 103 59.2
QL05p069871 Quercus lobata HOM05D000326 ORTHO05D003748 4.1e-21 105.1 103 59.2
QL10p003421 Quercus lobata HOM05D000326 ORTHO05D003748 4.1e-21 105.1 103 59.2
Rhsim02G0104400 Rhododendron simsii HOM05D000326 ORTHO05D003748 4.1e-21 105.1 82 68.3
Migut.H01598 Erythranthe guttata HOM05D000326 ORTHO05D003748 5.4e-21 104.8 103 55.3
HanXRQChr15g0470861 Helianthus annuus HOM05D000326 ORTHO05D003748 5.4e-21 104.8 103 57.3
Lj1A1238T58 Lonicera japonica HOM05D000326 ORTHO05D003748 5.4e-21 104.8 103 58.3
Thecc.06G231000 Theobroma cacao HOM05D000326 ORTHO05D003748 5.4e-21 104.8 82 69.5
TAR624G0942 Trochodendron aralioides HOM05D000326 ORTHO05D003748 5.4e-21 104.8 103 59.2
Ciclev10016358m.g Citrus clementina HOM05D000326 ORTHO05D003748 7.1e-21 104.4 103 58.3
DCAR_004868 Daucus carota HOM05D000326 ORTHO05D003748 7.1e-21 104.4 103 57.3
Glyma.17G009400 Glycine max HOM05D000326 ORTHO05D003748 7.1e-21 104.4 103 60.2
Lsat_1_v5_gn_7_14601 Lactuca sativa HOM05D000326 ORTHO05D003748 7.1e-21 104.4 103 56.3
MBI19_g29452_MAGBIO Magnolia biondii HOM05D000326 ORTHO05D003748 7.1e-21 104.4 82 67.1
RcHm_v2.0_Chr5g0001721 Rosa chinensis HOM05D000326 ORTHO05D003748 7.1e-21 104.4 103 60.2
Solyc04g014670.3 Solanum lycopersicum HOM05D000326 ORTHO05D003748 7.1e-21 104.4 82 65.9
MSTRG.14619 Avicennia marina HOM05D000326 ORTHO05D003748 9.2e-21 104.0 103 55.3
CSS0023135 Camellia sinensis var. sinensis HOM05D000326 ORTHO05D003748 9.2e-21 104.0 103 57.3
CANSAT56G0281 Cannabis sativa HOM05D000326 ORTHO05D003748 9.2e-21 104.0 104 57.7
CANSAT56G0392 Cannabis sativa HOM05D000182 ORTHO05D003748 9.2e-21 104.0 103 56.3
AUR62021879 Chenopodium quinoa HOM05D000326 ORTHO05D003748 9.2e-21 104.0 103 58.3
ECA248G0644 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.2e-21 104.0 103 55.3
Gohir.A10G010200 Gossypium hirsutum HOM05D000326 ORTHO05D003748 9.2e-21 104.0 117 53.0
Lj4g0020890 Lotus japonicus HOM05D000326 ORTHO05D003748 9.2e-21 104.0 103 59.2
PSO017G5127 Papaver somniferum HOM05D000326 ORTHO05D003748 9.2e-21 104.0 82 65.9
PSO675G4503 Papaver somniferum HOM05D000326 ORTHO05D003748 9.2e-21 104.0 82 65.9
Thecc.06G231100 Theobroma cacao HOM05D000326 ORTHO05D003748 9.2e-21 104.0 82 67.1
Ca_21053_v3 Cicer arietinum L. HOM05D000326 ORTHO05D003748 1.2e-20 103.6 103 57.3
Gohir.A10G010100 Gossypium hirsutum HOM05D000326 ORTHO05D003748 1.2e-20 103.6 103 58.3
Gohir.D10G009800 Gossypium hirsutum HOM05D000326 ORTHO05D003748 1.2e-20 103.6 103 58.3
Gorai.011G010700 Gossypium raimondii HOM05D000326 ORTHO05D003748 1.2e-20 103.6 103 58.3
Nitab4.5_0000574g0280 Nicotiana tabacum HOM05D000326 ORTHO05D003748 1.2e-20 103.6 82 65.9
Nitab4.5_0008006g0010 Nicotiana tabacum HOM05D000182 ORTHO05D003748 1.2e-20 103.6 82 65.9
Oeu007162.2 Olea europaea HOM05D000326 ORTHO05D003748 1.2e-20 103.6 103 59.2
Prupe.4G012900 Prunus persica HOM05D000326 ORTHO05D003748 1.2e-20 103.6 102 59.8
Manes.16G001800 Manihot esculenta HOM05D000326 ORTHO05D003748 1.6e-20 103.2 78 70.5
Rhsim02G0104500 Rhododendron simsii HOM05D000326 ORTHO05D003748 1.6e-20 103.2 82 67.1
arahy.Tifrunner.gnm1.ann1.1L9BHC Arachis hypogaea HOM05D000326 ORTHO05D003748 2.1e-20 102.8 103 58.3
arahy.Tifrunner.gnm1.ann1.GK2FLE Arachis hypogaea HOM05D000326 ORTHO05D003748 2.1e-20 102.8 103 58.3
AUR62021878 Chenopodium quinoa HOM05D000326 ORTHO05D003748 2.1e-20 102.8 105 55.2
CANSAT56G0433 Cannabis sativa HOM05D000326 ORTHO05D003748 2.7e-20 102.4 104 57.7
COL.COLO4_31856 Corchorus olitorius HOM05D000326 ORTHO05D003748 2.7e-20 102.4 117 49.6
DCAR_030879 Daucus carota HOM05D000182 ORTHO05D003748 2.7e-20 102.4 82 64.6
Lj6g0028133 Lotus japonicus HOM05D000182 ORTHO05D003748 2.7e-20 102.4 82 67.1
MD05G1355800 Malus domestica HOM05D000326 ORTHO05D003748 2.7e-20 102.4 103 57.3
MD10G1329100 Malus domestica HOM05D000326 ORTHO05D003748 2.7e-20 102.4 103 57.3
SalBow1G6431 Salvia bowleyana HOM05D000326 ORTHO05D003748 2.7e-20 102.4 82 63.4
SMO364G0844 Selaginella moellendorffii HOM05D000326 ORTHO05D003748 2.7e-20 102.4 102 58.8
Sc17g0007650 Simmondsia chinensis HOM05D000326 ORTHO05D003748 2.7e-20 102.4 103 57.3
PGSC0003DMG400013266 Solanum tuberosum HOM05D000182 ORTHO05D003748 2.7e-20 102.4 82 64.6
CANSAT56G1453 Cannabis sativa HOM05D000326 ORTHO05D003748 3.5e-20 102.1 82 65.9
Cpa.g.sc75.124 Carica papaya HOM05D000326 ORTHO05D003748 3.5e-20 102.1 82 65.9
ClCG01G009940 Citrullus lanatus HOM05D000326 ORTHO05D003748 3.5e-20 102.1 82 62.2
FvH4_3g01160 Fragaria vesca HOM05D000326 ORTHO05D003748 3.5e-20 102.1 103 57.3
HanXRQChr10g0282041 Helianthus annuus HOM05D000326 ORTHO05D003748 3.5e-20 102.1 103 56.3
Lsat_1_v5_gn_0_39500 Lactuca sativa HOM05D000326 ORTHO05D003748 3.5e-20 102.1 103 55.3
HanXRQChr01g0006611 Helianthus annuus HOM05D000326 ORTHO05D003748 4.6e-20 101.7 103 57.3
Phvul.003G082700 Phaseolus vulgaris HOM05D000326 ORTHO05D003748 4.6e-20 101.7 103 57.3
Duzib235G0859 Durio zibethinus HOM05D000182 ORTHO05D003748 6.0e-20 101.3 82 63.4
PSO210G3324 Papaver somniferum HOM05D000326 ORTHO05D003748 6.0e-20 101.3 102 55.9
CsaV3_1G045840 Cucumis sativus L. HOM05D000326 ORTHO05D003748 7.8e-20 100.9 82 62.2
FAN25G3275 Fragaria x ananassa HOM05D000326 ORTHO05D003748 7.8e-20 100.9 103 57.3
Sabra11G0013700 Salix brachista HOM05D000182 ORTHO05D003748 7.8e-20 100.9 89 64.0
Sed0028075 Sechium edule HOM05D000326 ORTHO05D003748 7.8e-20 100.9 82 62.2
BcaB03g11725 Brassica carinata HOM05D000326 ORTHO05D003748 1.0e-19 100.5 103 54.4
MELO3C021704.2 Cucumis melo HOM05D000326 ORTHO05D003748 1.0e-19 100.5 82 62.2
Eucgr.E03957 Eucalyptus grandis HOM05D000326 ORTHO05D003748 1.0e-19 100.5 110 53.6
Aa31LG9G10000 Aethionema arabicum HOM05D000326 ORTHO05D003748 1.3e-19 100.1 103 55.3
CARHR253480 Cardamine hirsuta HOM05D000326 ORTHO05D003748 1.3e-19 100.1 103 53.4
CDE04G1138 Ceratophyllum demersum HOM05D000326 ORTHO05D003748 1.3e-19 100.1 83 66.3
Glyma.09G008900 Glycine max HOM05D000182 ORTHO05D003748 1.7e-19 99.8 82 67.1
Glyma.15G113300 Glycine max HOM05D000182 ORTHO05D003748 1.7e-19 99.8 82 67.1
Manes.09G026500 Manihot esculenta HOM05D000326 ORTHO05D003748 1.7e-19 99.8 82 65.9
Medtr4g132850 Medicago truncatula HOM05D000326 ORTHO05D003748 1.7e-19 99.8 103 57.3
Psat4g003600 Pisum sativum HOM05D000326 ORTHO05D003748 1.7e-19 99.8 103 56.3
Mapoly0189s0004 Marchantia polymorpha HOM05D000326 ORTHO05D003748 2.3e-19 99.4 82 64.6
arahy.Tifrunner.gnm1.ann1.H48B83 Arachis hypogaea HOM05D000326 ORTHO05D003748 3.0e-19 99.0 99 61.6
SalBow1G6402 Salvia bowleyana HOM05D000326 ORTHO05D003748 3.0e-19 99.0 82 62.2
TPR.G37042 Trifolium pratense HOM05D000326 ORTHO05D003748 3.0e-19 99.0 103 56.3
EL10Ac8g20162 Beta vulgaris HOM05D000326 ORTHO05D003748 3.9e-19 98.6 82 65.9
Potri.011G022400 Populus trichocarpa HOM05D000326 ORTHO05D003748 3.9e-19 98.6 89 61.8
THA.LOC104813498 Tarenaya hassleriana HOM05D000326 ORTHO05D003748 3.9e-19 98.6 103 54.4
Sabra11G0013500 Salix brachista HOM05D000326 ORTHO05D003748 5.1e-19 98.2 89 61.8
Sabra11G0013600 Salix brachista HOM05D000326 ORTHO05D003748 5.1e-19 98.2 89 61.8
arahy.Tifrunner.gnm1.ann1.5KTK5R Arachis hypogaea HOM05D000182 ORTHO05D003748 6.6e-19 97.8 81 63.0
arahy.Tifrunner.gnm1.ann1.C9QTWM Arachis hypogaea HOM05D000182 ORTHO05D003748 6.6e-19 97.8 81 63.0
BcaC01g00769 Brassica carinata HOM05D000326 ORTHO05D003748 6.6e-19 97.8 85 61.2
Cc09_g01030 Coffea canephora HOM05D000326 ORTHO05D003748 6.6e-19 97.8 103 55.3
Pp3c18_20320 Physcomitrium patens HOM05D000326 ORTHO05D003748 6.6e-19 97.8 85 61.2
Glyma.02G116900 Glycine max HOM05D000326 ORTHO05D003748 8.6e-19 97.4 84 67.9
Sp6g04810 Schrenkiella parvula HOM05D000326 ORTHO05D003748 8.6e-19 97.4 103 51.5
A08p15630 Brassica napus HOM05D000326 ORTHO05D003748 1.1e-18 97.1 82 62.2
BraA08t33543Z Brassica rapa HOM05D000326 ORTHO05D003748 1.1e-18 97.1 82 62.2
Carub.0006s3199 Capsella rubella HOM05D000326 ORTHO05D003748 1.1e-18 97.1 82 61.0
MD05G1355400 Malus domestica HOM05D000326 ORTHO05D003748 1.1e-18 97.1 102 55.9
unitig_61.g26095 Utricularia gibba HOM05D000326 ORTHO05D003748 1.1e-18 97.1 103 51.5
AagrBONN_evm.TU.Sc2ySwM_228.2394 Anthoceros agrestis HOM05D000326 ORTHO05D003748 2.5e-18 95.9 82 64.6
AT4G05530 Arabidopsis thaliana HOM05D000326 ORTHO05D003748 2.5e-18 95.9 103 51.5
AL6G47670 Arabidopsis lyrata HOM05D000326 ORTHO05D003748 3.3e-18 95.5 103 51.5
BraA09t38233Z Brassica rapa HOM05D000326 ORTHO05D003748 3.3e-18 95.5 103 50.5
Thhalv10028901m.g Eutrema salsugineum HOM05D000326 ORTHO05D003748 3.3e-18 95.5 82 59.8
BcaB01g01773 Brassica carinata HOM05D000326 ORTHO05D003748 4.3e-18 95.1 103 50.5
C03p84080 Brassica napus HOM05D000326 ORTHO05D003748 4.3e-18 95.1 85 60.0
BolC3t20687H Brassica oleracea HOM05D000326 ORTHO05D003748 4.3e-18 95.1 85 60.0
Phvul.006G144400 Phaseolus vulgaris HOM05D000182 ORTHO05D003748 4.3e-18 95.1 82 64.6
Sp7g20400 Schrenkiella parvula HOM05D000326 ORTHO05D003748 4.3e-18 95.1 82 61.0
Zm00001eb305490 Zea mays HOM05D000326 ORTHO05D003748 4.3e-18 95.1 82 62.2
BcaC04g21261 Brassica carinata HOM05D000326 ORTHO05D003748 5.6e-18 94.7 103 50.5
A09p26600 Brassica napus HOM05D000326 ORTHO05D003748 5.6e-18 94.7 103 50.5
C09p33720 Brassica napus HOM05D000326 ORTHO05D003748 5.6e-18 94.7 103 50.5
BolC9t56206H Brassica oleracea HOM05D000326 ORTHO05D003748 5.6e-18 94.7 103 50.5
CBR_g38950 Chara braunii HOM05D000326 ORTHO05D003748 2.1e-17 92.8 110 50.0
Cc04_g03920 Coffea canephora HOM05D000326 ORTHO05D003748 2.1e-17 92.8 82 62.2
Os09g0133200 Oryza sativa ssp. japonica HOM05D000326 ORTHO05D003748 2.8e-17 92.4 82 64.6
Zm00001eb294750 Zea mays HOM05D000326 ORTHO05D003748 2.8e-17 92.4 82 64.6
vmacro15785 Vaccinium macrocarpon HOM05D000326 ORTHO05D003748 5.8e-15 84.7 83 60.2
SGA_v2.0_scaffold89G27492 Striga asiatica HOM05D000326 ORTHO05D003748 2.2e-14 82.8 116 45.7
VMungo1215G0871 Vigna mungo HOM05D000326 ORTHO05D003748 2.2e-14 82.8 132 43.9
MBI19_g29453_MAGBIO Magnolia biondii HOM05D000326 ORTHO05D003748 6.4e-14 81.3 99 50.5
HPP92_003052 Vanilla planifolia HOM05D000326 ORTHO05D003748 1.4e-13 80.1 110 44.5
TAR626G1478 Trochodendron aralioides HOM05D000326 ORTHO05D003748 3.2e-13 79.0 137 42.3
Haze_27223 Corylus avellana HOM05D000326 ORTHO05D003748 7.1e-13 77.8 82 46.3
Cre03.g191850 Chlamydomonas reinhardtii HOM05D000326 ORTHO05D003748 2.1e-12 76.3 89 47.2
FAN21G2425 Fragaria x ananassa HOM05D000326 ORTHO05D003748 1.0e-11 73.9 60 68.3
VMungo0540G1586 Vigna mungo HOM05D000182 ORTHO05D003748 1.3e-11 73.6 92 52.2
arahy.Tifrunner.gnm1.ann1.P5DNC9 Arachis hypogaea HOM05D000326 ORTHO05D003748 2.5e-10 69.3 74 52.7
arahy.Tifrunner.gnm1.ann1.VC0084 Arachis hypogaea HOM05D000326 ORTHO05D003748 3.3e-10 68.9 68 57.4
arahy.Tifrunner.gnm1.ann1.ZDA2WA Arachis hypogaea HOM05D000326 ORTHO05D003748 6.2e-09 64.7 60 56.7
Cpa.g.sc75.123 Carica papaya HOM05D000182 ORTHO05D003748 8.9e-08 60.8 71 52.1
COL.COLO4_21549 Corchorus olitorius HOM05D000326 ORTHO05D003748 2.2e-06 56.2 38 76.3
CANSAT64G0671 Cannabis sativa HOM05D000326 ORTHO05D003748 6.4e-06 54.7 66 50.0


User provided reference genes

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