Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32079 Sequoiadendron giganteum HOM05D004546 ORTHO05D005419 1.3e-220 769.6 447 100.0
CSS0049092 Camellia sinensis var. sinensis HOM05D004546 ORTHO05D005419 2.9e-47 193.7 402 33.8
vmacro01757 Vaccinium macrocarpon HOM05D004546 ORTHO05D005419 6.6e-47 192.6 436 31.9
Rhsim11G0128800 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.6e-45 188.0 459 31.8
PGSC0003DMG400010002 Solanum tuberosum HOM05D004546 ORTHO05D005419 2.1e-45 187.6 412 33.0
Hma1.2p1_1482F.1_g286200 Hydrangea macrophylla HOM05D004546 ORTHO05D005419 2.8e-45 187.2 421 33.3
Rhsim09G0016100 Rhododendron simsii HOM05D004546 ORTHO05D005419 4.0e-44 183.3 446 31.8
Cfa005513 Carpinus fangiana HOM05D004546 ORTHO05D005419 2.0e-43 181.0 434 30.9
PSO210G6794 Papaver somniferum HOM05D004546 ORTHO05D005419 1.3e-42 178.3 435 32.4
Sopen10g008970 Solanum pennellii HOM05D004546 ORTHO05D005419 2.2e-42 177.6 355 34.4
TAR628G0514 Trochodendron aralioides HOM05D004546 ORTHO05D005419 2.2e-42 177.6 353 35.4
CsaV3_5G025650 Cucumis sativus L. HOM05D004546 ORTHO05D005419 3.7e-42 176.8 443 31.2
Solyc10g019040.2 Solanum lycopersicum HOM05D004546 ORTHO05D005419 8.3e-42 175.6 350 34.6
DCAR_006706 Daucus carota HOM05D004546 ORTHO05D005419 1.4e-41 174.9 354 35.0
PSO210G7371 Papaver somniferum HOM05D004546 ORTHO05D005419 1.4e-41 174.9 435 32.2
CiPaw.05G045000 Carya illinoinensis HOM05D004546 ORTHO05D005419 4.1e-41 173.3 361 34.6
Migut.B00830 Erythranthe guttata HOM05D004546 ORTHO05D005419 5.4e-41 172.9 438 31.7
Glyma.05G169000 Glycine max HOM05D004546 ORTHO05D005419 7.0e-41 172.6 353 33.7
ATR0177G064 Amborella trichopoda HOM05D004546 ORTHO05D005419 9.2e-41 172.2 340 39.1
Phvul.002G249700 Phaseolus vulgaris HOM05D004546 ORTHO05D005419 1.2e-40 171.8 437 29.7
GSVIVG01035964001 Vitis vinifera HOM05D004546 ORTHO05D005419 1.6e-40 171.4 431 30.4
Peaxi162Scf00152g01427 Petunia axillaris HOM05D004546 ORTHO05D005419 2.0e-40 171.0 352 34.1
Lalb_Chr12g0204461 Lupinus albus HOM05D004546 ORTHO05D005419 2.7e-40 170.6 431 29.7
Rhsim09G0048700 Rhododendron simsii HOM05D004546 ORTHO05D005419 6.0e-40 169.5 292 37.7
Gorai.001G269700 Gossypium raimondii HOM05D004546 ORTHO05D005419 7.8e-40 169.1 434 29.7
Aqoxy6G00209 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 3.9e-39 166.8 442 30.5
Duzib177G0829 Durio zibethinus HOM05D004546 ORTHO05D005419 6.6e-39 166.0 434 29.7
Sed0013794 Sechium edule HOM05D004546 ORTHO05D005419 6.6e-39 166.0 447 30.2
QL02p098920 Quercus lobata HOM05D004546 ORTHO05D005419 8.6e-39 165.6 346 34.7
ECA234G1828 Erigeron canadensis HOM05D004546 ORTHO05D005419 1.5e-38 164.9 435 31.3
Sc11g0004500 Simmondsia chinensis HOM05D004546 ORTHO05D005419 2.5e-38 164.1 436 29.1
Prupe.1G570900 Prunus persica HOM05D004546 ORTHO05D005419 4.3e-38 163.3 354 33.1
VMungo0251G0798 Vigna mungo HOM05D004546 ORTHO05D005419 9.5e-38 162.2 466 29.0
CDE08G0494 Ceratophyllum demersum HOM05D004546 ORTHO05D005419 1.2e-37 161.8 407 33.9
THA.LOC104809617 Tarenaya hassleriana HOM05D004546 ORTHO05D005419 1.2e-37 161.8 441 29.0
SHI16664 Sapria himalayana HOM05D004546 ORTHO05D005419 2.1e-37 161.0 421 29.7
EL10Ac2g02703 Beta vulgaris HOM05D004546 ORTHO05D005419 2.8e-37 160.6 442 29.2
Ciclev10015244m.g Citrus clementina HOM05D004546 ORTHO05D005419 1.1e-36 158.7 356 32.0
Thecc.05G227600 Theobroma cacao HOM05D004546 ORTHO05D005419 3.1e-36 157.1 435 28.3
Ah.14g086060 Amaranthus hybridus HOM05D004546 ORTHO05D005419 5.2e-36 156.4 432 29.6
Gohir.D06G191600 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.5e-35 154.8 438 32.6
HPP92_000323 Vanilla planifolia HOM05D004546 ORTHO05D005419 1.5e-35 154.8 436 28.4
Sabra17G0029200 Salix brachista HOM05D004546 ORTHO05D005419 2.0e-35 154.5 430 28.8
MSTRG.16518 Avicennia marina HOM05D004546 ORTHO05D005419 2.6e-35 154.1 438 31.5
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 3.4e-35 153.7 423 29.6
Carub.0002s0420 Capsella rubella HOM05D004546 ORTHO05D005419 5.8e-35 152.9 430 29.5
ClCG03G000010 Citrullus lanatus HOM05D004546 ORTHO05D005419 7.5e-35 152.5 474 28.7
Nitab4.5_0003652g0050 Nicotiana tabacum HOM05D004546 ORTHO05D005419 7.5e-35 152.5 415 28.0
CANSAT54G1257 Cannabis sativa HOM05D004546 ORTHO05D005419 2.2e-34 151.0 361 30.7
Cc02_g22580 Coffea canephora HOM05D004546 ORTHO05D005419 2.2e-34 151.0 445 28.5
Os03g0577100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 2.2e-34 151.0 419 28.9
Potri.007G116200 Populus trichocarpa HOM05D004546 ORTHO05D005419 2.9e-34 150.6 434 27.9
FAN02G2941 Fragaria x ananassa HOM05D004546 ORTHO05D005419 3.7e-34 150.2 432 29.2
Nitab4.5_0000753g0130 Nicotiana tabacum HOM05D004546 ORTHO05D005419 3.7e-34 150.2 415 27.5
TPR.G23101 Trifolium pratense HOM05D004546 ORTHO05D005419 3.7e-34 150.2 446 28.0
Potri.017G043000 Populus trichocarpa HOM05D004546 ORTHO05D005419 8.3e-34 149.1 434 27.6
SGA_v2.0_scaffold110G31325 Striga asiatica HOM05D004546 ORTHO05D005419 1.4e-33 148.3 444 32.9
Actinidia00204 Actinidia chinensis HOM05D004546 ORTHO05D005419 1.9e-33 147.9 439 33.3
AT1G61000 Arabidopsis thaliana HOM05D004546 ORTHO05D005419 4.1e-33 146.7 430 28.6
Lj4g0018170 Lotus japonicus HOM05D004546 ORTHO05D005419 4.1e-33 146.7 324 32.1
Medtr8g088840 Medicago truncatula HOM05D004546 ORTHO05D005419 4.1e-33 146.7 451 28.8
Sp2g03510 Schrenkiella parvula HOM05D004546 ORTHO05D005419 4.1e-33 146.7 430 28.1
RcHm_v2.0_Chr7g0222021 Rosa chinensis HOM05D004546 ORTHO05D005419 5.4e-33 146.4 355 30.7
FvH4_6g25020 Fragaria vesca HOM05D004546 ORTHO05D005419 1.6e-32 144.8 387 29.5
Atru.chr8.1488 Acer truncatum HOM05D004546 ORTHO05D005419 2.1e-32 144.4 354 29.7
Thhalv10023463m.g Eutrema salsugineum HOM05D004546 ORTHO05D005419 2.7e-32 144.1 381 29.9
Gohir.A06G184800 Gossypium hirsutum HOM05D004546 ORTHO05D005419 3.5e-32 143.7 415 33.0
Psat7g062000 Pisum sativum HOM05D004546 ORTHO05D005419 1.7e-31 141.4 352 30.4
HanXRQChr10g0290511 Helianthus annuus HOM05D004546 ORTHO05D005419 2.3e-31 141.0 445 31.2
Eucgr.G00575 Eucalyptus grandis HOM05D004546 ORTHO05D005419 3.9e-31 140.2 356 30.6
Medtr4g049650 Medicago truncatula HOM05D004546 ORTHO05D005419 1.1e-30 138.7 358 29.6
CAN.G1330.18 Capsicum annuum HOM05D004546 ORTHO05D005419 1.9e-30 137.9 355 31.0
CARHR052070 Cardamine hirsuta HOM05D004546 ORTHO05D005419 3.3e-30 137.1 443 27.5
Cpa.g.sc8.264 Carica papaya HOM05D004546 ORTHO05D005419 1.2e-29 135.2 305 34.4
MD08G1233000 Malus domestica HOM05D004546 ORTHO05D005419 1.2e-29 135.2 380 28.9
Gorai.010G224800 Gossypium raimondii HOM05D004546 ORTHO05D005419 2.8e-29 134.0 438 30.6
FAN05G4088 Fragaria x ananassa HOM05D004546 ORTHO05D005419 3.6e-29 133.7 378 29.1
Ca_17808_v3 Cicer arietinum L. HOM05D004546 ORTHO05D005419 6.2e-29 132.9 357 30.0
BolC4t24246H Brassica oleracea HOM05D004546 ORTHO05D005419 1.1e-28 132.1 441 27.7
Haze_01703 Corylus avellana HOM05D004546 ORTHO05D005419 1.1e-28 132.1 539 24.9
Dinv24291 Davidia involucrata HOM05D004546 ORTHO05D005419 2.3e-28 131.0 418 31.8
Peaxi162Scf00152g01529 Petunia axillaris HOM05D004546 ORTHO05D005419 2.3e-28 131.0 359 31.5
Lsat_1_v5_gn_5_105520 Lactuca sativa HOM05D004546 ORTHO05D005419 3.1e-28 130.6 448 29.0
Os08g0163100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 4.0e-28 130.2 419 27.0
Atru.chr13.2649 Acer truncatum HOM05D004546 ORTHO05D005419 5.2e-28 129.8 268 33.6
FAN14G0315 Fragaria x ananassa HOM05D004546 ORTHO05D005419 6.8e-28 129.4 417 28.1
AUR62041118 Chenopodium quinoa HOM05D004546 ORTHO05D005419 8.9e-28 129.0 379 28.8
TPR.G28353 Trifolium pratense HOM05D004546 ORTHO05D005419 1.5e-27 128.3 289 33.9
C03p25600 Brassica napus HOM05D004546 ORTHO05D005419 2.6e-27 127.5 436 26.1
TWI59G0103 Tripterygium wilfordii HOM05D004546 ORTHO05D005419 4.4e-27 126.7 309 29.8
Hund15499 Selenicereus undatus HOM05D004546 ORTHO05D005419 2.9e-26 124.0 329 29.2
BolC3t14948H Brassica oleracea HOM05D004546 ORTHO05D005419 3.7e-26 123.6 449 26.9
Lj5A252T47 Lonicera japonica HOM05D004546 ORTHO05D005419 3.7e-26 123.6 451 25.3
A03p21620 Brassica napus HOM05D004546 ORTHO05D005419 8.3e-26 122.5 449 26.5
BraA03t11397Z Brassica rapa HOM05D004546 ORTHO05D005419 8.3e-26 122.5 449 26.5
AUR62014224 Chenopodium quinoa HOM05D004546 ORTHO05D005419 1.1e-25 122.1 428 27.1
RcHm_v2.0_Chr1g0336301 Rosa chinensis HOM05D004546 ORTHO05D005419 1.4e-25 121.7 346 28.0
AagrBONN_evm.TU.Sc2ySwM_117.2656 Anthoceros agrestis HOM05D004546 ORTHO05D005419 7.1e-25 119.4 252 31.3
Gohir.A07G227000 Gossypium hirsutum HOM05D004546 ORTHO05D005419 7.1e-25 119.4 418 29.7
arahy.Tifrunner.gnm1.ann1.QA5S84 Arachis hypogaea HOM05D004546 ORTHO05D005419 1.2e-24 118.6 355 26.5
GSVIVG01022895001 Vitis vinifera HOM05D004546 ORTHO05D005419 2.7e-24 117.5 382 26.7
MD15G1425300 Malus domestica HOM05D004546 ORTHO05D005419 3.5e-24 117.1 382 28.0
Medtr8g088800 Medicago truncatula HOM05D004546 ORTHO05D005419 7.8e-24 115.9 284 31.7
arahy.Tifrunner.gnm1.ann1.SB4BQ5 Arachis hypogaea HOM05D004546 ORTHO05D005419 1.0e-23 115.5 431 24.8
C04p25630 Brassica napus HOM05D004546 ORTHO05D005419 1.1e-22 112.1 490 25.5
FAN06G4932 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.9e-22 111.3 432 24.3
FvH4_7g06682 Fragaria vesca HOM05D004546 ORTHO05D005419 2.5e-22 110.9 432 24.3
Gohir.D07G234200 Gossypium hirsutum HOM05D004546 ORTHO05D005419 2.5e-22 110.9 428 29.2
TPR.G38758 Trifolium pratense HOM05D004546 ORTHO05D005419 3.3e-22 110.5 274 31.8
MELO3C002916.2 Cucumis melo HOM05D004546 ORTHO05D005419 7.3e-22 109.4 222 34.2
Lsat_1_v5_gn_8_80961 Lactuca sativa HOM05D004546 ORTHO05D005419 3.6e-21 107.1 230 40.0
Nn1g08777 Nelumbo nucifera HOM05D004546 ORTHO05D005419 4.7e-21 106.7 349 28.9
Manes.10G066500 Manihot esculenta HOM05D004546 ORTHO05D005419 1.1e-20 105.5 357 26.9
Oeu033122.2 Olea europaea HOM05D004546 ORTHO05D005419 1.4e-20 105.1 250 29.2
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 4.0e-20 103.6 452 25.4
PGR042G1236 Punica granatum HOM05D004546 ORTHO05D005419 4.4e-19 100.1 356 26.7
AL2G15450 Arabidopsis lyrata HOM05D004546 ORTHO05D005419 7.6e-19 99.4 225 34.2
Pp3c12_6220 Physcomitrium patens HOM05D004546 ORTHO05D005419 7.6e-19 99.4 431 27.4
BcaC02g10598 Brassica carinata HOM05D004546 ORTHO05D005419 2.2e-18 97.8 457 24.7
Carub.0002s0419 Capsella rubella HOM05D004546 ORTHO05D005419 2.9e-18 97.4 442 26.0
Sabra07G0094500 Salix brachista HOM05D004546 ORTHO05D005419 2.1e-16 91.3 593 21.4
unitig_8.g2954 Utricularia gibba HOM05D004546 ORTHO05D005419 3.0e-15 87.4 301 27.2
Zm00001eb064460 Zea mays HOM05D004546 ORTHO05D005419 3.9e-15 87.0 412 22.8
TPR.G31804 Trifolium pratense HOM05D004546 ORTHO05D005419 5.1e-15 86.7 209 34.0
SMO118G0303 Selaginella moellendorffii HOM05D044143 ORTHO05D050877 6.6e-15 86.3 245 30.2
Mapoly0004s0096 Marchantia polymorpha HOM05D004546 ORTHO05D005419 2.5e-14 84.3 440 23.9
MCO07G624 Micromonas commoda HOM05D004546 ORTHO05D005419 7.3e-14 82.8 149 33.6
Oeu027800.1 Olea europaea HOM05D004546 ORTHO05D005419 4.8e-13 80.1 172 32.6
PRCOL_00002550 Prasinoderma coloniale HOM05D004546 ORTHO05D005419 3.1e-12 77.4 345 31.6
COL.COLO4_10577 Corchorus olitorius HOM05D004546 ORTHO05D005419 6.9e-12 76.3 160 34.4
VMungo0251G0767 Vigna mungo HOM05D004546 ORTHO05D005419 1.7e-10 71.6 469 22.4
Cre01.g008450 Chlamydomonas reinhardtii HOM05D004546 ORTHO05D005419 4.9e-10 70.1 454 26.2
SMO222G0005 Selaginella moellendorffii HOM05D044143 ORTHO05D050877 7.9e-08 62.8 209 30.1
FAN03G2280 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.7e-07 61.6 250 22.4
Rhsim09G0048900 Rhododendron simsii HOM05D004546 ORTHO05D005419 3.0e-07 60.8 305 26.9
COL.COLO4_13071 Corchorus olitorius HOM05D004546 ORTHO05D005419 1.5e-06 58.5 174 24.1
Eucgr.L03482 Eucalyptus grandis HOM05D004546 ORTHO05D005419 1.5e-06 58.5 220 24.1
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.5e-06 57.8 68 45.6


User provided reference genes

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