Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32065 Sequoiadendron giganteum HOM05D001434 ORTHO05D004586 2.6e-109 398.7 193 100.0
Mapoly0021s0054 Marchantia polymorpha HOM05D001434 ORTHO05D004586 3.5e-21 105.9 178 37.6
ATR0794G053 Amborella trichopoda HOM05D001434 ORTHO05D004586 3.9e-20 102.4 195 37.9
GSVIVG01037676001 Vitis vinifera HOM05D001434 ORTHO05D004586 1.1e-19 100.9 198 34.8
Pp3c20_12230 Physcomitrium patens HOM05D001434 ORTHO05D004586 5.6e-19 98.6 180 38.3
Nn1g03482 Nelumbo nucifera HOM05D001434 ORTHO05D004586 5.2e-17 92.0 196 33.2
MBI02_g25402_MAGBIO Magnolia biondii HOM05D001434 ORTHO05D004586 6.8e-17 91.7 193 33.2
CiPaw.12G131400 Carya illinoinensis HOM05D001434 ORTHO05D004586 2.6e-16 89.7 194 34.0
Atru.chr2.3467 Acer truncatum HOM05D001434 ORTHO05D004586 3.4e-16 89.4 177 34.5
Atru.chr2.3480 Acer truncatum HOM05D001434 ORTHO05D004586 3.4e-16 89.4 177 34.5
Pp3c24_7080 Physcomitrium patens HOM05D001434 ORTHO05D004586 4.4e-16 89.0 176 33.5
COL.COLO4_09683 Corchorus olitorius HOM05D001434 ORTHO05D004586 9.8e-16 87.8 195 30.3
Manes.03G131600 Manihot esculenta HOM05D001434 ORTHO05D004586 1.7e-15 87.0 194 30.9
Thecc.07G033300 Theobroma cacao HOM05D001434 ORTHO05D004586 4.9e-15 85.5 196 33.2
MD03G1198400 Malus domestica HOM05D001434 ORTHO05D004586 6.4e-15 85.1 195 32.3
Solyc07g064740.3 Solanum lycopersicum HOM05D001434 ORTHO05D004586 1.1e-14 84.3 194 32.5
Sopen07g032940 Solanum pennellii HOM05D001434 ORTHO05D004586 1.1e-14 84.3 194 32.5
Duzib213G0248 Durio zibethinus HOM05D001434 ORTHO05D004586 1.4e-14 84.0 199 30.7
PSO541G5896 Papaver somniferum HOM05D001434 ORTHO05D004586 2.4e-14 83.2 174 34.5
Sed0001205 Sechium edule HOM05D001434 ORTHO05D004586 2.4e-14 83.2 194 32.0
SMO358G0516 Selaginella moellendorffii HOM05D001434 ORTHO05D004586 3.2e-14 82.8 181 33.7
Aqoxy1G03123 Aquilegia oxysepala HOM05D001434 ORTHO05D004586 5.4e-14 82.0 194 33.0
EL10Ac4g07774 Beta vulgaris HOM05D001434 ORTHO05D004586 5.4e-14 82.0 203 31.5
PGSC0003DMG400022311 Solanum tuberosum HOM05D001434 ORTHO05D004586 7.1e-14 81.6 196 33.2
Pp3c23_10600 Physcomitrium patens HOM05D001434 ORTHO05D004586 1.2e-13 80.9 167 35.9
RcHm_v2.0_Chr5g0040501 Rosa chinensis HOM05D001434 ORTHO05D004586 1.2e-13 80.9 196 31.6
Manes.15G070100 Manihot esculenta HOM05D001434 ORTHO05D004586 1.6e-13 80.5 194 28.9
CANSAT11G2014 Cannabis sativa HOM05D001434 ORTHO05D004586 2.1e-13 80.1 195 31.3
Nn1g07173 Nelumbo nucifera HOM05D001434 ORTHO05D004586 2.7e-13 79.7 179 34.6
arahy.Tifrunner.gnm1.ann1.0VB874 Arachis hypogaea HOM05D001434 ORTHO05D004586 3.5e-13 79.3 195 31.3
AagrBONN_evm.TU.Sc2ySwM_228.3056 Anthoceros agrestis HOM05D001434 ORTHO05D004586 6.0e-13 78.6 66 51.5
Haze_09703 Corylus avellana HOM05D001434 ORTHO05D004586 6.0e-13 78.6 194 30.9
FAN25G2755 Fragaria x ananassa HOM05D001434 ORTHO05D004586 6.0e-13 78.6 195 29.7
FvH4_3g23020 Fragaria vesca HOM05D001434 ORTHO05D004586 1.0e-12 77.8 195 29.2
FAN11G3048 Fragaria x ananassa HOM05D001434 ORTHO05D004586 1.0e-12 77.8 195 29.2
FAN21G1927 Fragaria x ananassa HOM05D001434 ORTHO05D004586 1.0e-12 77.8 195 29.2
HPP92_012415 Vanilla planifolia HOM05D001434 ORTHO05D004586 1.0e-12 77.8 173 34.7
Gohir.D05G372500 Gossypium hirsutum HOM05D001434 ORTHO05D004586 1.3e-12 77.4 194 30.4
Gorai.009G440800 Gossypium raimondii HOM05D001434 ORTHO05D004586 1.3e-12 77.4 194 30.4
Nitab4.5_0000328g0030 Nicotiana tabacum HOM05D001434 ORTHO05D004586 1.3e-12 77.4 195 32.3
Potri.011G089300 Populus trichocarpa HOM05D001434 ORTHO05D004586 2.3e-12 76.6 198 32.3
Cfa020319 Carpinus fangiana HOM05D001434 ORTHO05D004586 3.0e-12 76.3 195 30.8
Nitab4.5_0002287g0060 Nicotiana tabacum HOM05D001434 ORTHO05D004586 3.0e-12 76.3 195 32.3
BcaB08g35869 Brassica carinata HOM05D001434 ORTHO05D004586 3.9e-12 75.9 177 31.1
Sabra11G0093800 Salix brachista HOM05D001434 ORTHO05D004586 3.9e-12 75.9 197 31.5
Prupe.4G216600 Prunus persica HOM05D001434 ORTHO05D004586 5.1e-12 75.5 197 31.0
arahy.Tifrunner.gnm1.ann1.09LR4A Arachis hypogaea HOM05D001434 ORTHO05D004586 8.6e-12 74.7 195 29.7
Gohir.D01G068300 Gossypium hirsutum HOM05D001434 ORTHO05D004586 8.6e-12 74.7 195 29.7
Hund01976 Selenicereus undatus HOM05D001434 ORTHO05D004586 8.6e-12 74.7 193 30.6
TWI39G0476 Tripterygium wilfordii HOM05D001434 ORTHO05D004586 8.6e-12 74.7 195 30.8
CsaV3_3G004600 Cucumis sativus L. HOM05D001434 ORTHO05D004586 1.1e-11 74.3 194 30.4
FAN16G0031 Fragaria x ananassa HOM05D001434 ORTHO05D004586 1.1e-11 74.3 195 29.2
TWI38G0863 Tripterygium wilfordii HOM05D001434 ORTHO05D004586 1.1e-11 74.3 195 30.8
AUR62015810 Chenopodium quinoa HOM05D001434 ORTHO05D004586 1.5e-11 73.9 201 29.4
Peaxi162Scf00235g00421 Petunia axillaris HOM05D001434 ORTHO05D004586 1.5e-11 73.9 197 31.0
TPR.G1225 Trifolium pratense HOM05D001434 ORTHO05D004586 1.5e-11 73.9 197 29.9
CAN.G337.77 Capsicum annuum HOM05D001434 ORTHO05D004586 1.9e-11 73.6 195 31.3
Ca_06331_v3 Cicer arietinum L. HOM05D001434 ORTHO05D004586 2.5e-11 73.2 195 29.7
Ca_30702_v3 Cicer arietinum L. HOM05D001434 ORTHO05D004586 2.5e-11 73.2 195 29.7
Cc05_g13980 Coffea canephora HOM05D001434 ORTHO05D004586 2.5e-11 73.2 195 28.2
Gorai.002G090300 Gossypium raimondii HOM05D001434 ORTHO05D004586 2.5e-11 73.2 195 29.2
Medtr5g093230 Medicago truncatula HOM05D001434 ORTHO05D004586 2.5e-11 73.2 195 29.2
Os07g0511000 Oryza sativa ssp. japonica HOM05D001434 ORTHO05D004586 3.3e-11 72.8 206 30.1
QL08p009425 Quercus lobata HOM05D001434 ORTHO05D004586 4.3e-11 72.4 194 28.4
Ah.04g166010 Amaranthus hybridus HOM05D001434 ORTHO05D004586 5.6e-11 72.0 200 28.5
AL8G30560 Arabidopsis lyrata HOM05D001434 ORTHO05D004586 7.3e-11 71.6 173 30.1
BcaC04g20273 Brassica carinata HOM05D001434 ORTHO05D004586 7.3e-11 71.6 163 31.9
CARHR268410 Cardamine hirsuta HOM05D001434 ORTHO05D004586 7.3e-11 71.6 174 31.6
PSO675G6219 Papaver somniferum HOM05D001434 ORTHO05D004586 9.5e-11 71.2 119 39.5
Aa31LG3G10990 Aethionema arabicum HOM05D001434 ORTHO05D004586 1.2e-10 70.9 152 32.9
AT5G55060 Arabidopsis thaliana HOM05D001434 ORTHO05D004586 1.2e-10 70.9 173 29.5
C09p45620 Brassica napus HOM05D001434 ORTHO05D004586 1.2e-10 70.9 163 31.9
BolC9t57432H Brassica oleracea HOM05D001434 ORTHO05D004586 1.2e-10 70.9 163 31.9
CSS0024501 Camellia sinensis var. sinensis HOM05D001434 ORTHO05D004586 1.2e-10 70.9 195 28.7
Hund23230 Selenicereus undatus HOM05D001434 ORTHO05D004586 1.2e-10 70.9 198 29.3
BolC2t07748H Brassica oleracea HOM05D001434 ORTHO05D004586 1.6e-10 70.5 180 29.4
BraA10t43329Z Brassica rapa HOM05D001434 ORTHO05D004586 1.6e-10 70.5 163 31.3
Eucgr.F00743 Eucalyptus grandis HOM05D001434 ORTHO05D004586 1.6e-10 70.5 196 30.6
Ah.06g182830 Amaranthus hybridus HOM05D001434 ORTHO05D004586 2.1e-10 70.1 199 30.2
ClCG10G004950 Citrullus lanatus HOM05D001434 ORTHO05D004586 2.8e-10 69.7 174 30.5
A10p12360 Brassica napus HOM05D001434 ORTHO05D004586 4.7e-10 68.9 163 31.3
MELO3C014157.2 Cucumis melo HOM05D001434 ORTHO05D004586 4.7e-10 68.9 194 29.9
Thhalv10012904m.g Eutrema salsugineum HOM05D001434 ORTHO05D004586 4.7e-10 68.9 179 30.7
Medtr3g052790 Medicago truncatula HOM05D001434 ORTHO05D004586 6.2e-10 68.6 195 29.7
Dinv40771 Davidia involucrata HOM05D001434 ORTHO05D004586 8.1e-10 68.2 199 28.6
Sc03g0008500 Simmondsia chinensis HOM05D001434 ORTHO05D004586 8.1e-10 68.2 176 27.8
VMungo0647G2168 Vigna mungo HOM05D001434 ORTHO05D004586 8.1e-10 68.2 193 29.5
MSTRG.12984 Avicennia marina HOM05D001434 ORTHO05D004586 1.4e-09 67.4 178 27.0
SGA_v2.0_scaffold8G04338 Striga asiatica HOM05D001434 ORTHO05D004586 1.4e-09 67.4 179 30.7
Lalb_Chr04g0248331 Lupinus albus HOM05D001434 ORTHO05D004586 1.8e-09 67.0 122 34.4
THA.LOC104817673 Tarenaya hassleriana HOM05D001434 ORTHO05D004586 1.8e-09 67.0 174 32.2
CBR_g52387 Chara braunii HOM05D001434 ORTHO05D004586 2.3e-09 66.6 67 49.3
Ca_14751_v3 Cicer arietinum L. HOM05D001434 ORTHO05D004586 2.3e-09 66.6 198 29.8
Sp6g17000 Schrenkiella parvula HOM05D001434 ORTHO05D004586 2.3e-09 66.6 179 29.6
MD11G1214500 Malus domestica HOM05D001434 ORTHO05D004586 3.1e-09 66.2 171 31.6
arahy.Tifrunner.gnm1.ann1.QFUU5V Arachis hypogaea HOM05D001434 ORTHO05D004586 5.2e-09 65.5 180 30.0
CANSAT11G2500 Cannabis sativa HOM05D001434 ORTHO05D004586 5.2e-09 65.5 194 27.8
Lsat_1_v5_gn_7_110060 Lactuca sativa HOM05D001434 ORTHO05D004586 6.8e-09 65.1 122 36.1
Lj1A875G28 Lonicera japonica HOM05D001434 ORTHO05D004586 8.9e-09 64.7 176 30.1
Ciclev10007601m.g Citrus clementina HOM05D001434 ORTHO05D004586 1.2e-08 64.3 183 29.5
Migut.H01814 Erythranthe guttata HOM05D001434 ORTHO05D004586 1.2e-08 64.3 194 27.3
Glyma.02G292300 Glycine max HOM05D001434 ORTHO05D004586 1.2e-08 64.3 194 27.3
Lalb_Chr15g0081441 Lupinus albus HOM05D001434 ORTHO05D004586 1.2e-08 64.3 194 28.4
Lalb_Chr17g0348531 Lupinus albus HOM05D001434 ORTHO05D004586 1.2e-08 64.3 194 28.4
Glyma.14G022300 Glycine max HOM05D001434 ORTHO05D004586 1.5e-08 63.9 194 26.3
Rhsim06G0219000 Rhododendron simsii HOM05D001434 ORTHO05D004586 2.0e-08 63.5 165 30.3
vmacro02222 Vaccinium macrocarpon HOM05D001434 ORTHO05D004586 2.0e-08 63.5 165 30.3
VMungo0540G0244 Vigna mungo HOM05D001434 ORTHO05D004586 2.0e-08 63.5 201 27.9
Cpa.g.sc12.281 Carica papaya HOM05D001434 ORTHO05D004586 2.6e-08 63.2 193 28.0
CDE05G0747 Ceratophyllum demersum HOM05D001434 ORTHO05D004586 2.6e-08 63.2 157 30.6
C02p16470 Brassica napus HOM05D001434 ORTHO05D004586 4.4e-08 62.4 172 28.5
arahy.Tifrunner.gnm1.ann1.MF778S Arachis hypogaea HOM05D001434 ORTHO05D004586 5.8e-08 62.0 180 29.4
Carub.0008s1533 Capsella rubella HOM05D001434 ORTHO05D004586 5.8e-08 62.0 169 29.6
THA.LOC104811616 Tarenaya hassleriana HOM05D001434 ORTHO05D004586 5.8e-08 62.0 183 28.4
Actinidia05085 Actinidia chinensis HOM05D001434 ORTHO05D004586 7.6e-08 61.6 198 27.8
Actinidia08340 Actinidia chinensis HOM05D001434 ORTHO05D004586 7.6e-08 61.6 198 27.8
Glyma.08G319100 Glycine max HOM05D001434 ORTHO05D004586 9.9e-08 61.2 200 28.0
Psat0s3384g0040 Pisum sativum HOM05D001434 ORTHO05D004586 9.9e-08 61.2 122 31.1
Sed0002781 Sechium edule HOM05D001434 ORTHO05D004586 9.9e-08 61.2 93 38.7
AUR62020408 Chenopodium quinoa HOM05D001434 ORTHO05D004586 1.3e-07 60.8 119 33.6
Oeu034037.1 Olea europaea HOM05D001434 ORTHO05D004586 2.9e-07 59.7 164 25.6
C03p16670 Brassica napus HOM05D001434 ORTHO05D004586 4.9e-07 58.9 92 35.9
PGR031G3770 Punica granatum HOM05D001434 ORTHO05D004586 4.9e-07 58.9 85 37.6
A03p14290 Brassica napus HOM05D001434 ORTHO05D004586 6.4e-07 58.5 92 35.9
BraA03t10726Z Brassica rapa HOM05D001434 ORTHO05D004586 6.4e-07 58.5 92 35.9
BcaC01g06341 Brassica carinata HOM05D001434 ORTHO05D004586 8.4e-07 58.2 92 35.9
BolC3t14087H Brassica oleracea HOM05D001434 ORTHO05D004586 8.4e-07 58.2 92 35.9
ECA236G1274 Erigeron canadensis HOM05D001434 ORTHO05D004586 8.4e-07 58.2 86 41.9
Lsat_1_v5_gn_5_2920 Lactuca sativa HOM05D001434 ORTHO05D004586 8.4e-07 58.2 92 34.8
DCAR_016715 Daucus carota HOM05D001434 ORTHO05D004586 1.1e-06 57.8 93 35.5
ECA246G3933 Erigeron canadensis HOM05D001434 ORTHO05D004586 1.9e-06 57.0 95 33.7
BcaC03g14270 Brassica carinata HOM05D001434 ORTHO05D004586 2.4e-06 56.6 92 34.8
TPR.G39743 Trifolium pratense HOM05D001434 ORTHO05D004586 5.4e-06 55.5 164 29.3
Psat5g174680 Pisum sativum HOM05D001434 ORTHO05D004586 7.1e-06 55.1 174 29.3


User provided reference genes

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