Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31941 Sequoiadendron giganteum HOM05D004954 ORTHO05D006267 4.5e-77 291.2 147 100.0
Mapoly0098s0023 Marchantia polymorpha HOM05D004954 ORTHO05D006267 9.5e-11 70.9 39 82.1
SMO367G0402 Selaginella moellendorffii HOM05D004954 ORTHO05D006267 3.6e-10 68.9 39 76.9
CBR_g32699 Chara braunii HOM05D004954 ORTHO05D006267 4.7e-10 68.6 39 71.8
Aqoxy7G02924 Aquilegia oxysepala HOM05D004954 ORTHO05D006267 8.0e-10 67.8 40 75.0
GSVIVG01006234001 Vitis vinifera HOM05D004954 ORTHO05D006267 1.4e-09 67.0 40 75.0
Cfa002884 Carpinus fangiana HOM05D004954 ORTHO05D006267 1.8e-09 66.6 38 78.9
Haze_25215 Corylus avellana HOM05D004954 ORTHO05D006267 1.8e-09 66.6 38 78.9
MBI18_g30537_MAGBIO Magnolia biondii HOM05D004954 ORTHO05D006267 1.8e-09 66.6 54 66.7
Manes.13G054100 Manihot esculenta HOM05D004954 ORTHO05D006267 1.8e-09 66.6 38 78.9
ATR0824G007 Amborella trichopoda HOM05D004954 ORTHO05D006267 2.3e-09 66.2 38 76.3
Ca_12404_v3 Cicer arietinum L. HOM05D004954 ORTHO05D006267 2.3e-09 66.2 38 76.3
Medtr1g038570 Medicago truncatula HOM05D004954 ORTHO05D006267 2.3e-09 66.2 38 76.3
Psat6g025280 Pisum sativum HOM05D004954 ORTHO05D006267 2.3e-09 66.2 38 76.3
TPR.G29775 Trifolium pratense HOM05D004954 ORTHO05D006267 2.3e-09 66.2 38 76.3
Eucgr.H00730 Eucalyptus grandis HOM05D004954 ORTHO05D006267 3.1e-09 65.9 38 76.3
Pp3c20_5680 Physcomitrium patens HOM05D004954 ORTHO05D006267 3.1e-09 65.9 129 37.2
Actinidia23789 Actinidia chinensis HOM05D004954 ORTHO05D006267 4.0e-09 65.5 38 76.3
Actinidia34548 Actinidia chinensis HOM05D004954 ORTHO05D006267 4.0e-09 65.5 38 73.7
CSS0003762 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 4.0e-09 65.5 38 76.3
CANSAT01G1324 Cannabis sativa HOM05D004954 ORTHO05D006267 4.0e-09 65.5 38 76.3
CiPaw.13G054900 Carya illinoinensis HOM05D004954 ORTHO05D006267 4.0e-09 65.5 38 76.3
DCAR_012691 Daucus carota HOM05D004954 ORTHO05D006267 4.0e-09 65.5 38 76.3
HanXRQChr01g0007231 Helianthus annuus HOM05D004954 ORTHO05D006267 4.0e-09 65.5 38 76.3
Lj1C100T5 Lonicera japonica HOM05D004954 ORTHO05D006267 4.0e-09 65.5 38 76.3
Lj2g0006494 Lotus japonicus HOM05D004954 ORTHO05D006267 4.0e-09 65.5 38 76.3
Lalb_Chr19g0124251 Lupinus albus HOM05D004954 ORTHO05D006267 4.0e-09 65.5 38 76.3
Prupe.8G191000 Prunus persica HOM05D004954 ORTHO05D006267 4.0e-09 65.5 38 76.3
arahy.Tifrunner.gnm1.ann1.4YG7MF Arachis hypogaea HOM05D004954 ORTHO05D006267 5.2e-09 65.1 38 73.7
arahy.Tifrunner.gnm1.ann1.E22JQ7 Arachis hypogaea HOM05D004954 ORTHO05D006267 5.2e-09 65.1 38 73.7
arahy.Tifrunner.gnm1.ann1.R4R8P3 Arachis hypogaea HOM05D004954 ORTHO05D006267 5.2e-09 65.1 38 73.7
ClCG09G008140 Citrullus lanatus HOM05D004954 ORTHO05D006267 5.2e-09 65.1 38 76.3
MELO3C012723.2 Cucumis melo HOM05D004954 ORTHO05D006267 5.2e-09 65.1 38 76.3
Duzib211G0600 Durio zibethinus HOM05D004954 ORTHO05D006267 5.2e-09 65.1 38 76.3
ECA248G3210 Erigeron canadensis HOM05D004954 ORTHO05D006267 5.2e-09 65.1 38 76.3
Gohir.D07G166900 Gossypium hirsutum HOM05D004954 ORTHO05D006267 5.2e-09 65.1 38 76.3
Gorai.N003600 Gossypium raimondii HOM05D004954 ORTHO05D006267 5.2e-09 65.1 38 76.3
PGR044G2625 Punica granatum HOM05D004954 ORTHO05D006267 5.2e-09 65.1 38 73.7
Sed0007567 Sechium edule HOM05D004954 ORTHO05D006267 5.2e-09 65.1 38 76.3
TAR375G0531 Trochodendron aralioides HOM05D004954 ORTHO05D006267 5.2e-09 65.1 56 64.3
Ah.11g051040 Amaranthus hybridus HOM05D004954 ORTHO05D006267 6.8e-09 64.7 44 63.6
Rhsim13G0052400 Rhododendron simsii HOM05D004954 ORTHO05D006267 6.8e-09 64.7 54 66.7
Solyc06g083100.2 Solanum lycopersicum HOM05D004954 ORTHO05D006267 6.8e-09 64.7 39 71.8
Sopen06g034490 Solanum pennellii HOM05D004954 ORTHO05D006267 6.8e-09 64.7 39 71.8
Aa31sc420G20 Aethionema arabicum HOM05D004954 ORTHO05D006267 8.9e-09 64.3 38 76.3
AT5G48520 Arabidopsis thaliana HOM05D004954 ORTHO05D006267 8.9e-09 64.3 38 76.3
BcaC06g30786 Brassica carinata HOM05D004954 ORTHO05D006267 8.9e-09 64.3 38 76.3
A06p39130 Brassica napus HOM05D004954 ORTHO05D006267 8.9e-09 64.3 38 76.3
C07p39210 Brassica napus HOM05D004954 ORTHO05D006267 8.9e-09 64.3 38 76.3
BolC7t44441H Brassica oleracea HOM05D004954 ORTHO05D006267 8.9e-09 64.3 38 76.3
BraA06t26827Z Brassica rapa HOM05D004954 ORTHO05D006267 8.9e-09 64.3 38 76.3
CARHR183510 Cardamine hirsuta HOM05D004954 ORTHO05D006267 8.9e-09 64.3 38 76.3
Cc01_g16190 Coffea canephora HOM05D004954 ORTHO05D006267 8.9e-09 64.3 40 67.5
COL.COLO4_03294 Corchorus olitorius HOM05D004954 ORTHO05D006267 8.9e-09 64.3 56 62.5
Thhalv10003836m.g Eutrema salsugineum HOM05D004954 ORTHO05D006267 8.9e-09 64.3 38 76.3
FvH4_2g17860 Fragaria vesca HOM05D004954 ORTHO05D006267 8.9e-09 64.3 56 62.5
FAN15G2507 Fragaria x ananassa HOM05D004954 ORTHO05D006267 8.9e-09 64.3 56 62.5
FAN24G2804 Fragaria x ananassa HOM05D004954 ORTHO05D006267 8.9e-09 64.3 56 62.5
FAN27G0710 Fragaria x ananassa HOM05D004954 ORTHO05D006267 8.9e-09 64.3 56 62.5
QL09p046153 Quercus lobata HOM05D004954 ORTHO05D006267 8.9e-09 64.3 38 76.3
RcHm_v2.0_Chr6g0282881 Rosa chinensis HOM05D004954 ORTHO05D006267 8.9e-09 64.3 56 62.5
Sp2g18880 Schrenkiella parvula HOM05D004954 ORTHO05D006267 8.9e-09 64.3 38 76.3
vmacro21304 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 8.9e-09 64.3 36 77.8
Atru.chr12.963 Acer truncatum HOM05D004954 ORTHO05D006267 1.2e-08 63.9 38 73.7
CSS0025127 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D006267 1.2e-08 63.9 56 62.5
Migut.D00727 Erythranthe guttata HOM05D004954 ORTHO05D006267 1.2e-08 63.9 38 73.7
PSO063G7187 Papaver somniferum HOM05D004954 ORTHO05D006267 1.2e-08 63.9 38 73.7
PSO170G3087 Papaver somniferum HOM05D004954 ORTHO05D006267 1.2e-08 63.9 38 73.7
SalBow6G4493 Salvia bowleyana HOM05D004954 ORTHO05D006267 1.2e-08 63.9 38 73.7
SGA_v2.0_scaffold29G12103 Striga asiatica HOM05D004954 ORTHO05D006267 1.2e-08 63.9 38 73.7
EL10Ac5g10627 Beta vulgaris HOM05D004954 ORTHO05D006267 1.5e-08 63.5 38 71.1
AUR62008123 Chenopodium quinoa HOM05D004954 ORTHO05D006267 1.5e-08 63.5 38 71.1
Ciclev10004559m.g Citrus clementina HOM05D004954 ORTHO05D006267 1.5e-08 63.5 38 76.3
CsaV3_7G026900 Cucumis sativus L. HOM05D004954 ORTHO05D006267 1.5e-08 63.5 38 73.7
Sc17g0001680 Simmondsia chinensis HOM05D004954 ORTHO05D006267 1.5e-08 63.5 38 71.1
Thecc.01G211600 Theobroma cacao HOM05D004954 ORTHO05D006267 1.5e-08 63.5 56 62.5
Carub.0008s0810 Capsella rubella HOM05D004954 ORTHO05D006267 2.0e-08 63.2 38 73.7
CAN.G874.27 Capsicum annuum HOM05D004954 ORTHO05D006267 2.6e-08 62.8 38 71.1
Dinv10429 Davidia involucrata HOM05D004954 ORTHO05D006267 2.6e-08 62.8 63 55.6
Nitab4.5_0002463g0060 Nicotiana tabacum HOM05D004954 ORTHO05D006267 2.6e-08 62.8 38 71.1
Nitab4.5_0011983g0020 Nicotiana tabacum HOM05D004954 ORTHO05D006267 2.6e-08 62.8 38 71.1
Peaxi162Scf01242g00120 Petunia axillaris HOM05D004954 ORTHO05D006267 2.6e-08 62.8 38 71.1
Sabra14G0144200 Salix brachista HOM05D004954 ORTHO05D006267 2.6e-08 62.8 63 54.0
Solyc06g083090.4 Solanum lycopersicum HOM05D004954 ORTHO05D006267 2.6e-08 62.8 38 71.1
Sopen06g034480 Solanum pennellii HOM05D004954 ORTHO05D006267 2.6e-08 62.8 38 71.1
THA.LOC104818994 Tarenaya hassleriana HOM05D004954 ORTHO05D006267 2.6e-08 62.8 38 73.7
Atru.chr5.2285 Acer truncatum HOM05D004954 ORTHO05D006267 3.4e-08 62.4 63 54.0
Glyma.17G145700 Glycine max HOM05D004954 ORTHO05D006267 3.4e-08 62.4 38 73.7
Phvul.003G003500 Phaseolus vulgaris HOM05D004954 ORTHO05D006267 3.4e-08 62.4 38 73.7
VMungo0251G2039 Vigna mungo HOM05D004954 ORTHO05D006267 3.4e-08 62.4 38 73.7
AUR62028702 Chenopodium quinoa HOM05D004954 ORTHO05D006267 4.4e-08 62.0 38 71.1
Gohir.A07G159500 Gossypium hirsutum HOM05D004954 ORTHO05D006267 4.4e-08 62.0 67 53.7
MD10G1152500 Malus domestica HOM05D004954 ORTHO05D006267 4.4e-08 62.0 67 55.2
Potri.014G191100 Populus trichocarpa HOM05D004954 ORTHO05D006267 4.4e-08 62.0 38 73.7
TWI18G0293 Tripterygium wilfordii HOM05D004954 ORTHO05D006267 4.4e-08 62.0 38 71.1
vmacro21300 Vaccinium macrocarpon HOM05D004954 ORTHO05D006267 4.4e-08 62.0 43 67.4
HPP92_017515 Vanilla planifolia HOM05D004954 ORTHO05D006267 4.4e-08 62.0 38 73.7
Nn8g39913 Nelumbo nucifera HOM05D004954 ORTHO05D006267 5.8e-08 61.6 38 73.7
AagrBONN_evm.TU.Sc2ySwM_344.252 Anthoceros agrestis HOM05D004954 ORTHO05D006267 7.5e-08 61.2 47 63.8
DCAR_018627 Daucus carota HOM05D004954 ORTHO05D006267 7.5e-08 61.2 38 73.7
Hund09467 Selenicereus undatus HOM05D004954 ORTHO05D006267 7.5e-08 61.2 63 52.4
Cpa.g.sc8.76 Carica papaya HOM05D004954 ORTHO05D006267 9.8e-08 60.8 63 52.4
unitig_37.g12142 Utricularia gibba HOM05D004954 ORTHO05D006267 9.8e-08 60.8 53 60.4
Os06g0186500 Oryza sativa ssp. japonica HOM05D004954 ORTHO05D006267 1.3e-07 60.5 56 58.9
Dinv28815 Davidia involucrata HOM05D004954 ORTHO05D006267 1.7e-07 60.1 63 54.0
MSTRG.21308 Avicennia marina HOM05D004954 ORTHO05D006267 3.7e-07 58.9 129 37.2
FAN15G2379 Fragaria x ananassa HOM05D004954 ORTHO05D006267 3.7e-07 58.9 50 66.0
Oeu003633.1 Olea europaea HOM05D004954 ORTHO05D006267 8.3e-07 57.8 129 36.4


User provided reference genes

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