Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31897 Sequoiadendron giganteum HOM05D002378 ORTHO05D023460 3.4e-242 841.3 429 100.0
SEGI_28340 Sequoiadendron giganteum HOM05D002111 ORTHO05D002160 1.3e-63 248.1 123 95.1
TAR371G0108 Trochodendron aralioides HOM05D002378 ORTHO05D002936 2.8e-31 140.6 236 43.6
TAR629G0462 Trochodendron aralioides HOM05D002378 ORTHO05D002936 1.8e-30 137.9 239 46.0
ATR0053G021 Amborella trichopoda HOM05D002378 ORTHO05D002936 2.3e-25 120.9 226 43.8
MD06G1210100 Malus domestica HOM05D002378 ORTHO05D002936 3.4e-24 117.1 237 42.2
MBI16_g23769_MAGBIO Magnolia biondii HOM05D002378 ORTHO05D002936 1.3e-23 115.2 234 42.7
Nn3g17690 Nelumbo nucifera HOM05D002378 ORTHO05D002936 8.3e-23 112.5 241 40.2
Nn4g23696 Nelumbo nucifera HOM05D002378 ORTHO05D002936 1.8e-22 111.3 232 40.5
Aqoxy3G03892 Aquilegia oxysepala HOM05D002378 ORTHO05D002936 4.1e-22 110.2 222 41.0
RcHm_v2.0_Chr7g0184441 Rosa chinensis HOM05D002378 ORTHO05D002936 2.7e-21 107.5 238 41.6
Cpa.g.sc13.58 Carica papaya HOM05D002378 ORTHO05D002936 5.9e-21 106.3 235 41.7
MD14G1221000 Malus domestica HOM05D002378 ORTHO05D002936 5.9e-21 106.3 236 41.1
Cfa019834 Carpinus fangiana HOM05D002378 ORTHO05D002936 2.3e-20 104.4 230 37.0
CSS0027164 Camellia sinensis var. sinensis HOM05D002378 ORTHO05D002936 2.9e-20 104.0 252 37.7
Dinv38595 Davidia involucrata HOM05D002378 ORTHO05D002936 2.9e-20 104.0 233 37.3
TAR371G0705 Trochodendron aralioides HOM05D002378 ORTHO05D023460 3.9e-20 103.6 136 48.5
MELO3C017281.2 Cucumis melo HOM05D002378 ORTHO05D002936 5.0e-20 103.2 245 38.4
CsaV3_1G003560 Cucumis sativus L. HOM05D002378 ORTHO05D002936 1.1e-19 102.1 242 37.6
Gohir.A09G044900 Gossypium hirsutum HOM05D002378 ORTHO05D002936 1.5e-19 101.7 231 39.8
DCAR_011340 Daucus carota HOM05D002378 ORTHO05D002936 1.9e-19 101.3 218 45.0
Cc07_g05060 Coffea canephora HOM05D002378 ORTHO05D002936 4.3e-19 100.1 241 34.4
Thecc.03G027400 Theobroma cacao HOM05D002378 ORTHO05D002936 4.3e-19 100.1 234 40.6
CiPaw.16G083400 Carya illinoinensis HOM05D002378 ORTHO05D002936 7.3e-19 99.4 239 39.3
HanXRQChr05g0157741 Helianthus annuus HOM05D002378 ORTHO05D002936 7.3e-19 99.4 225 41.8
Lj5A141T92 Lonicera japonica HOM05D002378 ORTHO05D002936 9.5e-19 99.0 229 40.2
MSTRG.15418 Avicennia marina HOM05D002378 ORTHO05D002936 1.2e-18 98.6 223 37.2
FAN08G3159 Fragaria x ananassa HOM05D002378 ORTHO05D002936 1.2e-18 98.6 235 39.6
Gohir.D09G046600 Gossypium hirsutum HOM05D002378 ORTHO05D002936 2.8e-18 97.4 223 39.9
Duzib084G0818 Durio zibethinus HOM05D002378 ORTHO05D002936 3.6e-18 97.1 236 37.3
Gorai.006G063500 Gossypium raimondii HOM05D002378 ORTHO05D002936 3.6e-18 97.1 223 39.5
Eucgr.B00690 Eucalyptus grandis HOM05D002378 ORTHO05D002936 4.7e-18 96.7 242 35.5
MSTRG.23823 Avicennia marina HOM05D002378 ORTHO05D002936 1.4e-17 95.1 227 36.6
Prupe.5G216300 Prunus persica HOM05D002378 ORTHO05D002936 1.4e-17 95.1 223 41.7
ClCG06G015080 Citrullus lanatus HOM05D002378 ORTHO05D002936 1.8e-17 94.7 232 37.5
Hma1.2p1_0340F.1_g129970 Hydrangea macrophylla HOM05D002378 ORTHO05D002936 2.3e-17 94.4 232 41.8
ECA246G5105 Erigeron canadensis HOM05D002378 ORTHO05D002936 3.1e-17 94.0 225 42.7
SalBow1G2456 Salvia bowleyana HOM05D002378 ORTHO05D002936 4.0e-17 93.6 225 36.4
Sed0001506 Sechium edule HOM05D002378 ORTHO05D002936 4.0e-17 93.6 225 38.7
Rhsim12G0144900 Rhododendron simsii HOM05D002378 ORTHO05D002936 5.2e-17 93.2 253 37.5
CiPaw.15G125400 Carya illinoinensis HOM05D002378 ORTHO05D002936 8.9e-17 92.4 232 36.2
COL.COLO4_22702 Corchorus olitorius HOM05D002378 ORTHO05D002936 1.2e-16 92.0 227 41.9
FvH4_5g12800 Fragaria vesca HOM05D002378 ORTHO05D002936 2.0e-16 91.3 231 38.1
FAN18G2406 Fragaria x ananassa HOM05D002378 ORTHO05D002936 2.0e-16 91.3 231 38.1
Manes.05G118200 Manihot esculenta HOM05D002378 ORTHO05D002936 2.0e-16 91.3 239 40.6
GSVIVG01008226001 Vitis vinifera HOM05D002378 ORTHO05D002936 2.0e-16 91.3 234 38.0
Dinv34855 Davidia involucrata HOM05D002378 ORTHO05D002936 2.6e-16 90.9 237 37.1
unitig_62.g23398 Utricularia gibba HOM05D002378 ORTHO05D002936 3.4e-16 90.5 229 37.6
ClCG06G015090 Citrullus lanatus HOM05D002378 ORTHO05D002936 4.4e-16 90.1 235 38.3
FAN18G2445 Fragaria x ananassa HOM05D002378 ORTHO05D002936 4.4e-16 90.1 231 38.1
CANSAT80G1104 Cannabis sativa HOM05D002378 ORTHO05D002936 5.8e-16 89.7 249 39.4
QL10p023133 Quercus lobata HOM05D002378 ORTHO05D002936 7.5e-16 89.4 229 36.2
Prupe.3G240400 Prunus persica HOM05D002378 ORTHO05D002936 1.3e-15 88.6 236 39.0
MELO3C017280.2 Cucumis melo HOM05D002378 ORTHO05D002936 1.7e-15 88.2 241 37.3
CsaV3_1G003550 Cucumis sativus L. HOM05D002378 ORTHO05D002936 1.7e-15 88.2 243 37.4
Lsat_1_v5_gn_5_24260 Lactuca sativa HOM05D002378 ORTHO05D002936 1.7e-15 88.2 226 39.8
Actinidia35073 Actinidia chinensis HOM05D002378 ORTHO05D002936 2.2e-15 87.8 232 37.1
Rhsim08G0079800 Rhododendron simsii HOM05D002378 ORTHO05D002936 2.2e-15 87.8 243 36.2
PSO478G4524 Papaver somniferum HOM05D002378 ORTHO05D002936 2.9e-15 87.4 240 37.5
Ah.10g037500 Amaranthus hybridus HOM05D002378 ORTHO05D002936 4.9e-15 86.7 230 38.7
PGR083G2054 Punica granatum HOM05D002378 ORTHO05D002936 6.4e-15 86.3 226 34.5
Sabra12G0040600 Salix brachista HOM05D002378 ORTHO05D002936 6.4e-15 86.3 240 37.9
Aa31LG10G4960 Aethionema arabicum HOM05D002378 ORTHO05D002936 8.3e-15 85.9 237 37.1
Ca_25197_v3 Cicer arietinum L. HOM05D002378 ORTHO05D002936 8.3e-15 85.9 232 35.3
Lj9A432T68 Lonicera japonica HOM05D002378 ORTHO05D002936 8.3e-15 85.9 224 39.3
Actinidia26290 Actinidia chinensis HOM05D002378 ORTHO05D002936 1.1e-14 85.5 247 36.0
CSS0031813 Camellia sinensis var. sinensis HOM05D002378 ORTHO05D002936 1.4e-14 85.1 252 34.1
Lj1g0020022 Lotus japonicus HOM05D002378 ORTHO05D002936 1.4e-14 85.1 233 39.9
Cfa007954 Carpinus fangiana HOM05D002378 ORTHO05D002936 2.4e-14 84.3 244 35.2
Mapoly0138s0007 Marchantia polymorpha HOM05D002378 ORTHO05D002936 2.4e-14 84.3 240 37.1
C08p04540 Brassica napus HOM05D002378 ORTHO05D002936 3.2e-14 84.0 236 38.6
Cc04_g07600 Coffea canephora HOM05D002378 ORTHO05D002936 4.1e-14 83.6 249 37.8
PGSC0003DMG401010047 Solanum tuberosum HOM05D002378 ORTHO05D002936 4.1e-14 83.6 234 35.9
AL1G55800 Arabidopsis lyrata HOM05D002378 ORTHO05D002936 7.0e-14 82.8 240 35.4
BcaC02g09661 Brassica carinata HOM05D002378 ORTHO05D002936 7.0e-14 82.8 231 38.1
C04p45270 Brassica napus HOM05D002378 ORTHO05D002936 7.0e-14 82.8 231 38.1
BolC8t47258H Brassica oleracea HOM05D002378 ORTHO05D002936 1.2e-13 82.0 239 38.5
CSS0029737 Camellia sinensis var. sinensis HOM05D002378 ORTHO05D002936 1.2e-13 82.0 224 37.9
TWI15G1079 Tripterygium wilfordii HOM05D002378 ORTHO05D002936 1.2e-13 82.0 240 35.0
MD17G1073400 Malus domestica HOM05D002378 ORTHO05D002936 2.7e-13 80.9 236 36.0
Psat1g025720 Pisum sativum HOM05D002378 ORTHO05D002936 2.7e-13 80.9 219 34.2
BcaB04g17375 Brassica carinata HOM05D002378 ORTHO05D002936 3.5e-13 80.5 240 37.1
Thhalv10027687m.g Eutrema salsugineum HOM05D002378 ORTHO05D002936 4.6e-13 80.1 230 37.4
TWI77G0650 Tripterygium wilfordii HOM05D002378 ORTHO05D002936 4.6e-13 80.1 217 37.3
AagrBONN_evm.TU.Sc2ySwM_228.746 Anthoceros agrestis HOM05D002378 ORTHO05D002936 6.0e-13 79.7 236 40.3
vmacro18104 Vaccinium macrocarpon HOM05D002378 ORTHO05D002936 6.0e-13 79.7 250 36.8
BraA08t32454Z Brassica rapa HOM05D002378 ORTHO05D002936 7.8e-13 79.3 242 38.4
Duzib068G0447 Durio zibethinus HOM05D002378 ORTHO05D002936 7.8e-13 79.3 235 37.0
CiPaw.03G058900 Carya illinoinensis HOM05D002378 ORTHO05D002936 1.0e-12 79.0 242 36.4
CDE01G0476 Ceratophyllum demersum HOM05D002378 ORTHO05D002936 1.0e-12 79.0 242 35.5
Hma1.2p1_0550F.1_g177190 Hydrangea macrophylla HOM05D002378 ORTHO05D002936 1.0e-12 79.0 247 35.2
Sp7g03280 Schrenkiella parvula HOM05D002378 ORTHO05D002936 1.0e-12 79.0 253 34.0
TWI81G0305 Tripterygium wilfordii HOM05D002378 ORTHO05D002936 1.0e-12 79.0 238 34.5
BolC4t26110H Brassica oleracea HOM05D002378 ORTHO05D002936 3.9e-12 77.0 232 37.1
Haze_14115 Corylus avellana HOM05D002378 ORTHO05D002936 3.9e-12 77.0 275 32.4
Nitab4.5_0009272g0020 Nicotiana tabacum HOM05D002378 ORTHO05D002936 3.9e-12 77.0 231 35.9
Oeu033431.1 Olea europaea HOM05D002378 ORTHO05D002936 3.9e-12 77.0 228 35.1
Haze_14121 Corylus avellana HOM05D002378 ORTHO05D002936 5.0e-12 76.6 279 31.9
HanXRQChr15g0486631 Helianthus annuus HOM05D002378 ORTHO05D002936 5.0e-12 76.6 230 35.2
Atru.chr9.739 Acer truncatum HOM05D002378 ORTHO05D002936 6.6e-12 76.3 241 37.3
Carub.0007s3722 Capsella rubella HOM05D002378 ORTHO05D002936 6.6e-12 76.3 245 35.1
Medtr2g055750 Medicago truncatula HOM05D002378 ORTHO05D002936 6.6e-12 76.3 228 33.8
Solyc02g089810.3 Solanum lycopersicum HOM05D002378 ORTHO05D002936 6.6e-12 76.3 230 36.1
BcaB02g07999 Brassica carinata HOM05D002378 ORTHO05D002936 1.1e-11 75.5 227 37.0
Haze_18594 Corylus avellana HOM05D002378 ORTHO05D002936 1.1e-11 75.5 122 40.2
Lalb_Chr08g0235111 Lupinus albus HOM05D002378 ORTHO05D002936 1.1e-11 75.5 240 34.2
Sopen02g034500 Solanum pennellii HOM05D002378 ORTHO05D002936 1.1e-11 75.5 231 35.1
THA.LOC104805553 Tarenaya hassleriana HOM05D002378 ORTHO05D002936 1.5e-11 75.1 242 34.7
BcaB06g27235 Brassica carinata HOM05D002378 ORTHO05D002936 1.9e-11 74.7 229 34.9
Ciclev10019126m.g Citrus clementina HOM05D002378 ORTHO05D002936 1.9e-11 74.7 236 37.3
Carub.0001s3814 Capsella rubella HOM05D002378 ORTHO05D002936 2.5e-11 74.3 248 33.1
Thecc.04G139000 Theobroma cacao HOM05D002378 ORTHO05D002936 2.5e-11 74.3 235 34.0
TWI74G0601 Tripterygium wilfordii HOM05D002378 ORTHO05D002936 2.5e-11 74.3 217 36.4
PSO017G6834 Papaver somniferum HOM05D002378 ORTHO05D002936 3.3e-11 73.9 244 34.8
QL02p052949 Quercus lobata HOM05D002378 ORTHO05D002936 3.3e-11 73.9 248 34.7
Hund16116 Selenicereus undatus HOM05D002378 ORTHO05D002936 3.3e-11 73.9 230 36.1
A04p11530 Brassica napus HOM05D002378 ORTHO05D002936 4.3e-11 73.6 231 37.2
BraA04t16818Z Brassica rapa HOM05D002378 ORTHO05D002936 4.3e-11 73.6 231 37.2
Migut.K00860 Erythranthe guttata HOM05D002378 ORTHO05D002936 4.3e-11 73.6 212 33.5
VMungo1383G1609 Vigna mungo HOM05D002378 ORTHO05D002936 7.3e-11 72.8 246 33.7
Gohir.D08G047300 Gossypium hirsutum HOM05D002378 ORTHO05D002936 1.2e-10 72.0 240 34.2
Phvul.008G020500 Phaseolus vulgaris HOM05D002378 ORTHO05D002936 1.2e-10 72.0 239 33.9
Manes.02G066200 Manihot esculenta HOM05D002378 ORTHO05D002936 1.6e-10 71.6 223 34.5
AT1G48970 Arabidopsis thaliana HOM05D002378 ORTHO05D002936 2.1e-10 71.2 243 32.5
Oeu025116.2 Olea europaea HOM05D002378 ORTHO05D002936 2.1e-10 71.2 223 34.5
Aqoxy3G00380 Aquilegia oxysepala HOM05D002378 ORTHO05D002936 2.8e-10 70.9 245 31.8
Ciclev10011249m.g Citrus clementina HOM05D002378 ORTHO05D002936 8.1e-10 69.3 242 32.6
Cpa.g.sc818.2 Carica papaya HOM05D002378 ORTHO05D002936 1.4e-09 68.6 229 36.7
CDE02G2012 Ceratophyllum demersum HOM05D002378 ORTHO05D002936 1.4e-09 68.6 235 34.0
Gorai.004G046500 Gossypium raimondii HOM05D002378 ORTHO05D002936 1.4e-09 68.6 233 33.0
Migut.H00530 Erythranthe guttata HOM05D002378 ORTHO05D002936 1.8e-09 68.2 227 32.6
Sc11g0008140 Simmondsia chinensis HOM05D002378 ORTHO05D002936 1.8e-09 68.2 226 35.0
CANSAT64G0412 Cannabis sativa HOM05D002378 ORTHO05D002936 2.3e-09 67.8 238 31.1
Eucgr.I02131 Eucalyptus grandis HOM05D002378 ORTHO05D002936 2.3e-09 67.8 255 32.5
SGA_v2.0_scaffold10G05138 Striga asiatica HOM05D002378 ORTHO05D002936 2.3e-09 67.8 230 34.8
AL7G51900 Arabidopsis lyrata HOM05D002378 ORTHO05D002936 3.1e-09 67.4 244 34.4
COL.COLO4_16199 Corchorus olitorius HOM05D002378 ORTHO05D002936 3.1e-09 67.4 238 32.4
Potri.012G059300 Populus trichocarpa HOM05D002378 ORTHO05D002936 3.1e-09 67.4 109 45.9
Peaxi162Scf01056g00251 Petunia axillaris HOM05D002378 ORTHO05D002936 4.0e-09 67.0 224 34.8
arahy.Tifrunner.gnm1.ann1.X6Y4TE Arachis hypogaea HOM05D002378 ORTHO05D002936 5.2e-09 66.6 253 32.0
Ah.16g102060 Amaranthus hybridus HOM05D002378 ORTHO05D002936 6.8e-09 66.2 240 34.6
AUR62008960 Chenopodium quinoa HOM05D002378 ORTHO05D002936 6.8e-09 66.2 229 32.3
arahy.Tifrunner.gnm1.ann1.AT7X8X Arachis hypogaea HOM05D002378 ORTHO05D002936 8.9e-09 65.9 255 31.8
Lj9C216G0 Lonicera japonica HOM05D002378 ORTHO05D002936 8.9e-09 65.9 168 37.5
BcaC07g37090 Brassica carinata HOM05D002378 ORTHO05D002936 1.2e-08 65.5 246 35.4
Dinv06179 Davidia involucrata HOM05D002378 ORTHO05D025263 1.5e-08 65.1 107 38.3
SGA_v2.0_scaffold150G36625 Striga asiatica HOM05D002378 ORTHO05D002936 1.5e-08 65.1 221 33.9
Glyma.18G280600 Glycine max HOM05D002378 ORTHO05D002936 2.0e-08 64.7 250 32.8
Glyma.19G044300 Glycine max HOM05D002378 ORTHO05D002936 2.0e-08 64.7 251 33.5
CARHR038980 Cardamine hirsuta HOM05D002378 ORTHO05D002936 2.6e-08 64.3 119 45.4
SEGI_14068 Sequoiadendron giganteum HOM05D002314 ORTHO05D002538 2.6e-08 64.3 154 35.7
RcHm_v2.0_Chr2g0163261 Rosa chinensis HOM05D002378 ORTHO05D002936 3.4e-08 63.9 215 34.0
Sp1g35880 Schrenkiella parvula HOM05D002378 ORTHO05D002936 3.4e-08 63.9 108 44.4
Pp3c19_10090 Physcomitrium patens HOM05D002378 ORTHO05D002936 4.4e-08 63.5 223 36.8
SEGI_28930 Sequoiadendron giganteum HOM05D000994 ORTHO05D000817 4.4e-08 63.5 83 44.6
PGSC0003DMG400023069 Solanum tuberosum HOM05D002378 ORTHO05D002936 5.8e-08 63.2 224 36.6
Solyc12g038340.2 Solanum lycopersicum HOM05D002378 ORTHO05D002936 7.5e-08 62.8 229 35.4
Lj2g0001107 Lotus japonicus HOM05D002378 ORTHO05D002936 1.3e-07 62.0 244 32.8
arahy.Tifrunner.gnm1.ann1.Q4MAQ8 Arachis hypogaea HOM05D002378 ORTHO05D002936 1.7e-07 61.6 235 31.9
AUR62014543 Chenopodium quinoa HOM05D002378 ORTHO05D002936 2.9e-07 60.8 230 29.6
arahy.Tifrunner.gnm1.ann1.GUVP28 Arachis hypogaea HOM05D002378 ORTHO05D002936 3.7e-07 60.5 237 32.1
arahy.Tifrunner.gnm1.ann1.Q3QSXL Arachis hypogaea HOM05D002378 ORTHO05D002936 3.7e-07 60.5 225 32.4
arahy.Tifrunner.gnm1.ann1.S5WKMD Arachis hypogaea HOM05D002378 ORTHO05D002936 3.7e-07 60.5 225 32.4
Nitab4.5_0006132g0040 Nicotiana tabacum HOM05D002378 ORTHO05D002936 4.9e-07 60.1 231 37.7
Peaxi162Scf00119g00131 Petunia axillaris HOM05D002378 ORTHO05D002936 6.4e-07 59.7 232 35.8
SGA_v2.0_scaffold62G21546 Striga asiatica HOM05D002378 ORTHO05D002936 1.1e-06 58.9 220 33.6
Ca_26252_v3 Cicer arietinum L. HOM05D002378 ORTHO05D002936 1.4e-06 58.5 242 33.5
SGA_v2.0_scaffold204G41650 Striga asiatica HOM05D002378 ORTHO05D002936 1.9e-06 58.2 96 41.7
EL10Ac2g04613 Beta vulgaris HOM05D002378 ORTHO05D002936 2.4e-06 57.8 238 32.4
FAN09G2739 Fragaria x ananassa HOM05D002378 ORTHO05D002936 2.4e-06 57.8 216 32.9
Glyma.13G047500 Glycine max HOM05D002378 ORTHO05D002936 2.4e-06 57.8 241 32.4
FvH4_6g45430 Fragaria vesca HOM05D002378 ORTHO05D002936 3.2e-06 57.4 211 33.6
FAN02G3097 Fragaria x ananassa HOM05D002378 ORTHO05D002936 3.2e-06 57.4 218 32.1
Medtr7g018590 Medicago truncatula HOM05D002378 ORTHO05D002936 3.2e-06 57.4 226 35.0
Potri.004G103700 Populus trichocarpa HOM05D002378 ORTHO05D002936 3.2e-06 57.4 240 31.7
Sabra04G0077700 Salix brachista HOM05D002378 ORTHO05D002936 4.1e-06 57.0 229 31.0
HPP92_026838 Vanilla planifolia HOM05D002378 ORTHO05D002936 5.4e-06 56.6 243 31.3
C01p40680 Brassica napus HOM05D002378 ORTHO05D021942 7.1e-06 56.2 121 39.7
CARHR214080 Cardamine hirsuta HOM05D002378 ORTHO05D002936 9.2e-06 55.8 226 33.2
FAN14G4540 Fragaria x ananassa HOM05D002378 ORTHO05D002936 9.2e-06 55.8 211 34.1


User provided reference genes

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