Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31890 Sequoiadendron giganteum HOM05D004764 ORTHO05D005580 4.2e-165 584.7 314 100.0
VMungo0464G2049 Vigna mungo HOM05D004764 ORTHO05D005580 2.4e-96 356.3 314 63.7
ATR0736G027 Amborella trichopoda HOM05D004764 ORTHO05D005580 3.2e-96 355.9 314 62.7
Potri.010G194300 Populus trichocarpa HOM05D004764 ORTHO05D005580 2.0e-95 353.2 314 62.4
Phvul.004G157700 Phaseolus vulgaris HOM05D004764 ORTHO05D005580 2.7e-95 352.8 314 62.7
GSVIVG01016388001 Vitis vinifera HOM05D004764 ORTHO05D005580 2.7e-95 352.8 314 61.5
Glyma.09G184900 Glycine max HOM05D004764 ORTHO05D005580 5.9e-95 351.7 314 62.4
Lalb_Chr14g0371191 Lupinus albus HOM05D004764 ORTHO05D005580 1.7e-94 350.1 316 62.3
Lj2g0017902 Lotus japonicus HOM05D004764 ORTHO05D005580 2.3e-94 349.7 314 62.7
Dinv20933 Davidia involucrata HOM05D004764 ORTHO05D005580 3.0e-94 349.4 319 61.4
Dinv21011 Davidia involucrata HOM05D004764 ORTHO05D005580 3.0e-94 349.4 319 61.4
Lj1C949T1 Lonicera japonica HOM05D004764 ORTHO05D005580 3.9e-94 349.0 320 61.9
Lj1A432T27 Lonicera japonica HOM05D004764 ORTHO05D005580 5.0e-94 348.6 318 61.9
TAR369G1012 Trochodendron aralioides HOM05D004764 ORTHO05D005580 8.6e-94 347.8 314 61.8
QL07p043722 Quercus lobata HOM05D004764 ORTHO05D005580 1.5e-93 347.1 312 61.2
Cfa017589 Carpinus fangiana HOM05D004764 ORTHO05D005580 3.3e-93 345.9 316 60.8
Ca_25497_v3 Cicer arietinum L. HOM05D004764 ORTHO05D005580 4.3e-93 345.5 314 61.1
Zm00001eb429110 Zea mays HOM05D004764 ORTHO05D005580 7.3e-93 344.7 321 57.9
CSS0016003 Camellia sinensis var. sinensis HOM05D004764 ORTHO05D005580 9.5e-93 344.4 322 61.2
TAR623G1788 Trochodendron aralioides HOM05D004764 ORTHO05D005580 9.5e-93 344.4 314 60.5
TWI09G1390 Tripterygium wilfordii HOM05D004764 ORTHO05D005580 1.2e-92 344.0 314 60.8
Sopen03g006610 Solanum pennellii HOM05D004764 ORTHO05D005580 1.6e-92 343.6 320 59.7
Migut.F01566 Erythranthe guttata HOM05D004764 ORTHO05D005580 2.1e-92 343.2 321 60.7
Lalb_Chr22g0353041 Lupinus albus HOM05D004764 ORTHO05D005580 2.1e-92 343.2 315 61.0
Nitab4.5_0012769g0010 Nicotiana tabacum HOM05D004764 ORTHO05D005580 2.1e-92 343.2 320 59.4
CSS0010099 Camellia sinensis var. sinensis HOM05D004764 ORTHO05D005580 2.8e-92 342.8 322 61.2
PSO585G0029 Papaver somniferum HOM05D004764 ORTHO05D005580 4.7e-92 342.0 314 60.2
Solyc04g071730.3 Solanum lycopersicum HOM05D004764 ORTHO05D005580 6.2e-92 341.7 320 59.1
CiPaw.10G131000 Carya illinoinensis HOM05D004764 ORTHO05D005580 8.0e-92 341.3 314 59.2
COL.COLO4_25609 Corchorus olitorius HOM05D004764 ORTHO05D005580 8.0e-92 341.3 314 61.5
Manes.10G019100 Manihot esculenta HOM05D004764 ORTHO05D005580 1.0e-91 340.9 315 59.7
Medtr6g084580 Medicago truncatula HOM05D004764 ORTHO05D005580 1.4e-91 340.5 314 60.8
Cpa.g.sc19.234 Carica papaya HOM05D004764 ORTHO05D005580 1.8e-91 340.1 315 60.3
Psat1g037840 Pisum sativum HOM05D004764 ORTHO05D005580 1.8e-91 340.1 316 61.1
Sopen04g027710 Solanum pennellii HOM05D004764 ORTHO05D005580 1.8e-91 340.1 320 58.8
Atru.chr12.285 Acer truncatum HOM05D004764 ORTHO05D005580 2.3e-91 339.7 312 59.6
Duzib106G0320 Durio zibethinus HOM05D004764 ORTHO05D005580 3.1e-91 339.3 316 60.4
Gohir.A10G228400 Gossypium hirsutum HOM05D004764 ORTHO05D005580 3.1e-91 339.3 314 60.2
Nitab4.5_0000344g0160 Nicotiana tabacum HOM05D004764 ORTHO05D005580 3.1e-91 339.3 320 59.4
Lj1g0004796 Lotus japonicus HOM05D004764 ORTHO05D005580 4.0e-91 339.0 315 61.9
TWI73G0601 Tripterygium wilfordii HOM05D004764 ORTHO05D005580 4.0e-91 339.0 314 60.5
vmacro01597 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 5.2e-91 338.6 323 58.8
Atru.chr12.324 Acer truncatum HOM05D004764 ORTHO05D005580 6.8e-91 338.2 312 59.3
Gorai.011G278800 Gossypium raimondii HOM05D004764 ORTHO05D005580 6.8e-91 338.2 314 59.9
ClCG11G006420 Citrullus lanatus HOM05D004764 ORTHO05D005580 1.2e-90 337.4 315 59.7
Os04g0530400 Oryza sativa ssp. japonica HOM05D004764 ORTHO05D005580 1.2e-90 337.4 317 58.7
PSO384G2817 Papaver somniferum HOM05D004764 ORTHO05D005580 1.2e-90 337.4 314 59.9
Aqoxy1G00756 Aquilegia oxysepala HOM05D004764 ORTHO05D005580 1.5e-90 337.0 312 57.7
Os12g0154400 Oryza sativa ssp. japonica HOM05D004764 ORTHO05D005580 1.5e-90 337.0 317 58.7
PGSC0003DMG400006372 Solanum tuberosum HOM05D004764 ORTHO05D005580 2.0e-90 336.7 320 58.1
CAN.G308.66 Capsicum annuum HOM05D004764 ORTHO05D005580 3.4e-90 335.9 320 58.4
THA.LOC104816565 Tarenaya hassleriana HOM05D004764 ORTHO05D005580 3.4e-90 335.9 315 58.7
HanXRQChr12g0369401 Helianthus annuus HOM05D004764 ORTHO05D005580 4.4e-90 335.5 322 59.6
MELO3C008270.2 Cucumis melo HOM05D004764 ORTHO05D005580 5.8e-90 335.1 314 59.6
Ciclev10032191m.g Citrus clementina HOM05D004764 ORTHO05D005580 7.5e-90 334.7 316 58.5
MD02G1196300 Malus domestica HOM05D004764 ORTHO05D005580 7.5e-90 334.7 315 60.3
Sed0006926 Sechium edule HOM05D004764 ORTHO05D005580 7.5e-90 334.7 314 59.9
CANSAT21G1253 Cannabis sativa HOM05D004764 ORTHO05D005580 9.8e-90 334.3 314 59.2
DCAR_011775 Daucus carota HOM05D004764 ORTHO05D005580 9.8e-90 334.3 320 57.2
CAN.G2159.1 Capsicum annuum HOM05D004764 ORTHO05D005580 1.7e-89 333.6 320 57.8
FAN10G3109 Fragaria x ananassa HOM05D004764 ORTHO05D005580 1.7e-89 333.6 314 58.9
Thecc.10G137500 Theobroma cacao HOM05D004764 ORTHO05D005580 2.2e-89 333.2 314 59.9
MSTRG.8305 Avicennia marina HOM05D004764 ORTHO05D005580 2.9e-89 332.8 320 57.8
Ciclev10016032m.g Citrus clementina HOM05D004764 ORTHO05D005580 2.9e-89 332.8 314 57.6
Prupe.2G152400 Prunus persica HOM05D004764 ORTHO05D005580 2.9e-89 332.8 314 58.6
CARHR041910 Cardamine hirsuta HOM05D004764 ORTHO05D005580 3.7e-89 332.4 315 57.5
Aqoxy7G01280 Aquilegia oxysepala HOM05D004764 ORTHO05D005580 6.4e-89 331.6 315 57.5
arahy.Tifrunner.gnm1.ann1.BR1H5V Arachis hypogaea HOM05D004764 ORTHO05D005580 6.4e-89 331.6 315 60.0
RcHm_v2.0_Chr1g0351821 Rosa chinensis HOM05D004764 ORTHO05D005580 1.1e-88 330.9 315 59.0
FvH4_7g12790 Fragaria vesca HOM05D004764 ORTHO05D005580 1.9e-88 330.1 314 58.3
SalBow6G7043 Salvia bowleyana HOM05D004764 ORTHO05D005580 2.4e-88 329.7 320 58.1
Cc02_g20660 Coffea canephora HOM05D004764 ORTHO05D005580 3.2e-88 329.3 320 56.2
MD07G1124900 Malus domestica HOM05D004764 ORTHO05D005580 3.2e-88 329.3 314 59.6
FAN10G1216 Fragaria x ananassa HOM05D004764 ORTHO05D005580 4.1e-88 328.9 312 58.3
SGA_v2.0_scaffold130G34221 Striga asiatica HOM05D004764 ORTHO05D005580 9.2e-88 327.8 320 57.5
Thhalv10011542m.g Eutrema salsugineum HOM05D004764 ORTHO05D005580 1.6e-87 327.0 315 56.2
PGR142G0534 Punica granatum HOM05D004764 ORTHO05D005580 1.6e-87 327.0 315 59.0
Hund16007 Selenicereus undatus HOM05D004764 ORTHO05D005580 1.6e-87 327.0 314 58.6
AL1G59680 Arabidopsis lyrata HOM05D004764 ORTHO05D005580 3.5e-87 325.9 316 57.0
Sp1g38390 Schrenkiella parvula HOM05D004764 ORTHO05D005580 3.5e-87 325.9 315 55.6
ECA233G3311 Erigeron canadensis HOM05D004764 ORTHO05D005580 1.0e-86 324.3 325 56.9
EL10Ac2g04766 Beta vulgaris HOM05D004764 ORTHO05D005580 1.7e-86 323.6 314 57.3
Aa31LG10G3070 Aethionema arabicum HOM05D004764 ORTHO05D005580 2.3e-86 323.2 315 55.9
AT1G51740 Arabidopsis thaliana HOM05D004764 ORTHO05D005580 3.0e-86 322.8 316 57.0
Carub.0001s4061 Capsella rubella HOM05D004764 ORTHO05D005580 5.0e-86 322.0 316 56.3
arahy.Tifrunner.gnm1.ann1.V0Z2W7 Arachis hypogaea HOM05D004764 ORTHO05D005580 4.3e-85 318.9 315 58.4
Eucgr.G03020 Eucalyptus grandis HOM05D004764 ORTHO05D005580 5.6e-85 318.5 315 59.0
Peaxi162Scf00064g00126 Petunia axillaris HOM05D004764 ORTHO05D005580 7.3e-85 318.2 319 56.4
Peaxi162Scf00010g01114 Petunia axillaris HOM05D004764 ORTHO05D005580 9.5e-85 317.8 319 56.4
Lsat_1_v5_gn_8_14200 Lactuca sativa HOM05D004764 ORTHO05D005580 3.6e-84 315.8 312 56.4
Ah.16g104720 Amaranthus hybridus HOM05D004764 ORTHO05D005580 4.7e-84 315.5 314 55.1
BcaB02g11053 Brassica carinata HOM05D004764 ORTHO05D005580 4.7e-84 315.5 317 54.3
Mapoly0024s0083 Marchantia polymorpha HOM05D004764 ORTHO05D005580 4.7e-84 315.5 315 55.6
Ah.02g115950 Amaranthus hybridus HOM05D004764 ORTHO05D005580 1.4e-83 313.9 314 55.1
Rhsim09G0171300 Rhododendron simsii HOM05D004764 ORTHO05D005580 1.4e-83 313.9 367 51.5
unitig_0.g2163 Utricularia gibba HOM05D004764 ORTHO05D005580 1.8e-83 313.5 327 54.7
FAN01G0026 Fragaria x ananassa HOM05D004764 ORTHO05D005580 3.1e-83 312.8 349 52.7
CsaV3_6G001590 Cucumis sativus L. HOM05D004764 ORTHO05D005580 2.6e-82 309.7 287 60.3
Gohir.D10G242400 Gossypium hirsutum HOM05D004764 ORTHO05D005580 2.6e-82 309.7 281 61.2
Solyc03g033850.3 Solanum lycopersicum HOM05D004764 ORTHO05D005580 4.4e-82 308.9 283 60.1
A06p02240 Brassica napus HOM05D004764 ORTHO05D005580 3.7e-81 305.8 299 55.5
BolC6t35797H Brassica oleracea HOM05D004764 ORTHO05D005580 6.4e-81 305.1 299 55.2
BraA06t23434Z Brassica rapa HOM05D004764 ORTHO05D005580 1.4e-80 303.9 299 55.2
BcaB07g33630 Brassica carinata HOM05D004764 ORTHO05D005580 7.1e-80 301.6 300 55.0
Lsat_1_v5_gn_9_12660 Lactuca sativa HOM05D004764 ORTHO05D005580 2.3e-78 296.6 314 53.5
Actinidia00927 Actinidia chinensis HOM05D004764 ORTHO05D005580 8.6e-78 294.7 321 55.1
Glyma.07G091000 Glycine max HOM05D004764 ORTHO05D005580 5.6e-77 292.0 314 56.1
SMO356G0668 Selaginella moellendorffii HOM05D004764 ORTHO05D005580 1.4e-75 287.3 309 52.1
BcaC08g43344 Brassica carinata HOM05D004764 ORTHO05D005580 5.2e-75 285.4 291 53.6
C06p07040 Brassica napus HOM05D004764 ORTHO05D005580 6.8e-75 285.0 291 52.9
SHI03532 Sapria himalayana HOM05D004764 ORTHO05D005580 1.2e-74 284.3 316 53.5
FAN06G0806 Fragaria x ananassa HOM05D004764 ORTHO05D005580 2.6e-74 283.1 260 60.4
Sc11g0007530 Simmondsia chinensis HOM05D004764 ORTHO05D005580 5.8e-74 282.0 266 59.8
Sabra10G0149400 Salix brachista HOM05D004764 ORTHO05D005580 2.2e-73 280.0 274 57.3
Haze_20561 Corylus avellana HOM05D004764 ORTHO05D005580 2.9e-73 279.6 268 59.0
Nn5g27977 Nelumbo nucifera HOM05D004764 ORTHO05D005580 8.4e-73 278.1 314 52.5
AUR62041843 Chenopodium quinoa HOM05D004764 ORTHO05D005580 4.1e-72 275.8 314 51.9
Pp3c6_24680 Physcomitrium patens HOM05D004764 ORTHO05D005580 3.5e-71 272.7 317 50.2
Oeu013001.1 Olea europaea HOM05D004764 ORTHO05D005580 6.0e-71 271.9 276 55.4
Lj1C433T7 Lonicera japonica HOM05D004764 ORTHO05D005580 2.1e-68 263.5 258 58.1
HPP92_027811 Vanilla planifolia HOM05D004764 ORTHO05D005580 3.1e-67 259.6 313 47.6
AagrBONN_evm.TU.Sc2ySwM_368.928 Anthoceros agrestis HOM05D004764 ORTHO05D005580 5.2e-67 258.8 291 49.8
AUR62032348 Chenopodium quinoa HOM05D004764 ORTHO05D005580 9.9e-66 254.6 266 53.4
Nitab4.5_0011923g0010 Nicotiana tabacum HOM05D004764 ORTHO05D005580 1.7e-62 243.8 314 47.1
Lj1C435T9 Lonicera japonica HOM05D004764 ORTHO05D005580 8.1e-60 235.0 244 55.3
vmacro10073 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 1.1e-59 234.6 235 57.4
Potri.008G063100 Populus trichocarpa HOM05D004764 ORTHO05D005580 1.3e-54 217.6 223 54.7
Nitab4.5_0002828g0150 Nicotiana tabacum HOM05D004764 ORTHO05D005580 5.3e-51 205.7 393 38.9
TPR.G27934 Trifolium pratense HOM05D004764 ORTHO05D005580 3.8e-49 199.5 177 63.8
CDE09G0086 Ceratophyllum demersum HOM05D004764 ORTHO05D005580 3.5e-47 193.0 184 60.3
Oeu032670.1 Olea europaea HOM05D004764 ORTHO05D005580 1.3e-44 184.5 178 61.2
SEGI_41058 Sequoiadendron giganteum HOM05D004764 ORTHO05D005580 7.1e-40 168.7 89 100.0
C06p13300 Brassica napus HOM05D001194 ORTHO05D005580 1.5e-37 161.0 271 41.0
Zm00001eb427200 Zea mays HOM05D004764 ORTHO05D005580 1.3e-36 157.9 154 57.8
PGSC0003DMG400022548 Solanum tuberosum HOM05D004764 ORTHO05D005580 8.2e-36 155.2 122 71.3
Actinidia27825 Actinidia chinensis HOM05D004764 ORTHO05D005580 6.9e-35 152.1 158 57.0
Glyma.17G199500 Glycine max HOM05D004764 ORTHO05D005580 7.6e-34 148.7 111 73.0
MCO05G144 Micromonas commoda HOM05D004764 ORTHO05D005580 1.4e-32 144.4 313 35.8
PSO339G3467 Papaver somniferum HOM05D004764 ORTHO05D005580 1.0e-30 138.3 143 59.4
HPP92_004405 Vanilla planifolia HOM05D004764 ORTHO05D005580 8.2e-28 128.6 120 51.7
BolC6t36490H Brassica oleracea HOM05D001194 ORTHO05D000015 7.7e-26 122.1 274 37.2
CBR_g29687 Chara braunii HOM05D004764 ORTHO05D005580 4.2e-24 116.3 93 65.6
BcaC08g43937 Brassica carinata HOM05D001194 ORTHO05D004786 2.0e-21 107.5 127 51.2
Sabra08G0046500 Salix brachista HOM05D004764 ORTHO05D005580 4.8e-20 102.8 248 31.5
Eucgr.L03566 Eucalyptus grandis HOM05D004764 ORTHO05D005580 2.4e-19 100.5 90 60.0
vmacro10891 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 1.0e-17 95.1 149 45.0
vmacro10074 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 1.4e-16 91.3 110 47.3
Actinidia13909 Actinidia chinensis HOM05D004764 ORTHO05D005580 4.7e-15 86.3 88 59.1
Cre17.g711450 Chlamydomonas reinhardtii HOM05D004764 ORTHO05D005580 7.9e-15 85.5 394 25.9
BcaC08g43936 Brassica carinata HOM05D004764 ORTHO05D005580 4.8e-12 76.3 63 55.6
Ah.16g102910 Amaranthus hybridus HOM05D004764 ORTHO05D005580 5.3e-11 72.8 57 61.4
Actinidia13908 Actinidia chinensis HOM05D004764 ORTHO05D005580 5.5e-08 62.8 58 55.2
PRCOL_00004763 Prasinoderma coloniale HOM05D001748 ORTHO05D001759 1.0e-06 58.5 120 35.8


User provided reference genes

Program Settings