Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31881 Sequoiadendron giganteum HOM05D004391 ORTHO05D005193 1.5e-46 189.1 91 100.0
CBR_g1035 Chara braunii HOM05D004391 ORTHO05D005193 6.1e-16 87.4 54 63.0
Sc15g0002370 Simmondsia chinensis HOM05D004391 ORTHO05D005193 2.3e-15 85.5 54 68.5
Nn5g27585 Nelumbo nucifera HOM05D004391 ORTHO05D005193 3.0e-15 85.1 53 67.9
Cpa.g.sc2.267 Carica papaya HOM05D004391 ORTHO05D005193 3.9e-15 84.7 53 64.2
Nn5g26793 Nelumbo nucifera HOM05D004391 ORTHO05D005193 6.7e-15 84.0 53 66.0
TWI09G0083 Tripterygium wilfordii HOM05D004391 ORTHO05D005193 6.7e-15 84.0 53 64.2
TWI53G1180 Tripterygium wilfordii HOM05D004391 ORTHO05D005193 6.7e-15 84.0 53 62.3
TAR633G0676 Trochodendron aralioides HOM05D004391 ORTHO05D005193 8.8e-15 83.6 53 64.2
HPP92_003137 Vanilla planifolia HOM05D004391 ORTHO05D005193 8.8e-15 83.6 53 64.2
Aa31LG11G6460 Aethionema arabicum HOM05D004391 ORTHO05D005193 1.5e-14 82.8 54 57.4
Thhalv10015196m.g Eutrema salsugineum HOM05D004391 ORTHO05D005193 1.5e-14 82.8 58 53.4
PGR142G4161 Punica granatum HOM05D004391 ORTHO05D005193 1.5e-14 82.8 53 62.3
RcHm_v2.0_Chr5g0073771 Rosa chinensis HOM05D004391 ORTHO05D005193 1.5e-14 82.8 53 66.0
unitig_747.g21439 Utricularia gibba HOM05D001024 ORTHO05D000878 1.5e-14 82.8 60 61.7
Ciclev10010097m.g Citrus clementina HOM05D004391 ORTHO05D005193 1.9e-14 82.4 53 62.3
Ciclev10013576m.g Citrus clementina HOM05D004391 ORTHO05D005193 1.9e-14 82.4 53 62.3
Sp6g37450 Schrenkiella parvula HOM05D004391 ORTHO05D005193 1.9e-14 82.4 58 51.7
Duzib114G0048 Durio zibethinus HOM05D004391 ORTHO05D005193 2.5e-14 82.0 53 62.3
Duzib128G1816 Durio zibethinus HOM05D004391 ORTHO05D005193 2.5e-14 82.0 53 60.4
Prupe.6G038800 Prunus persica HOM05D004391 ORTHO05D005193 2.5e-14 82.0 53 64.2
SHI19278 Sapria himalayana HOM05D004391 ORTHO05D005193 2.5e-14 82.0 50 66.0
Thecc.10G186500 Theobroma cacao HOM05D004391 ORTHO05D005193 2.5e-14 82.0 52 63.5
HPP92_000080 Vanilla planifolia HOM05D004391 ORTHO05D005193 2.5e-14 82.0 53 60.4
Zm00001eb375180 Zea mays HOM05D004391 ORTHO05D005193 2.5e-14 82.0 56 60.7
Eucgr.G03166 Eucalyptus grandis HOM05D004391 ORTHO05D005193 3.3e-14 81.6 53 62.3
HanXRQChr10g0292911 Helianthus annuus HOM05D004391 ORTHO05D005193 3.3e-14 81.6 53 62.3
Oeu025053.1 Olea europaea HOM05D004391 ORTHO05D005193 3.3e-14 81.6 53 64.2
THA.LOC109117202 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 3.3e-14 81.6 54 61.1
BcaC06g32250 Brassica carinata HOM05D004391 ORTHO05D005193 4.3e-14 81.3 54 53.7
A10p30830 Brassica napus HOM05D004391 ORTHO05D005193 4.3e-14 81.3 54 53.7
C09p71330 Brassica napus HOM05D004391 ORTHO05D005193 4.3e-14 81.3 54 53.7
BolC9t59895H Brassica oleracea HOM05D004391 ORTHO05D005193 4.3e-14 81.3 54 53.7
BraA10t45125Z Brassica rapa HOM05D004391 ORTHO05D005193 4.3e-14 81.3 54 53.7
Carub.0006s0430 Capsella rubella HOM05D004391 ORTHO05D005193 4.3e-14 81.3 54 53.7
Thhalv10015197m.g Eutrema salsugineum HOM05D004391 ORTHO05D005193 4.3e-14 81.3 54 53.7
MD03G1047800 Malus domestica HOM05D004391 ORTHO05D005193 4.3e-14 81.3 53 60.4
Manes.18G125100 Manihot esculenta HOM05D004391 ORTHO05D005193 4.3e-14 81.3 53 62.3
Os06g0175900 Oryza sativa ssp. japonica HOM05D004391 ORTHO05D005193 4.3e-14 81.3 56 58.9
Os06g0177000 Oryza sativa ssp. japonica HOM05D004391 ORTHO05D005193 4.3e-14 81.3 56 58.9
Sp6g37680 Schrenkiella parvula HOM05D004391 ORTHO05D005193 4.3e-14 81.3 54 53.7
Ciclev10033444m.g Citrus clementina HOM05D004391 ORTHO05D005193 5.7e-14 80.9 53 60.4
Dinv12291 Davidia involucrata HOM05D000139 ORTHO05D000103 5.7e-14 80.9 53 62.3
THA.LOC104816504 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 5.7e-14 80.9 54 61.1
THA.LOC104823167 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 5.7e-14 80.9 54 59.3
AL6G15270 Arabidopsis lyrata HOM05D004391 ORTHO05D005193 7.4e-14 80.5 54 53.7
AT5G05370 Arabidopsis thaliana HOM05D004391 ORTHO05D005193 7.4e-14 80.5 54 53.7
BcaB01g05713 Brassica carinata HOM05D004391 ORTHO05D005193 7.4e-14 80.5 54 53.7
CSS0038074 Camellia sinensis var. sinensis HOM05D004391 ORTHO05D005193 7.4e-14 80.5 53 62.3
CARHR207860 Cardamine hirsuta HOM05D004391 ORTHO05D005193 7.4e-14 80.5 54 53.7
CiPaw.05G185700 Carya illinoinensis HOM05D004391 ORTHO05D005193 7.4e-14 80.5 53 60.4
Haze_12207 Corylus avellana HOM05D004391 ORTHO05D005193 7.4e-14 80.5 53 60.4
LjContig00141g0006354 Lotus japonicus HOM05D004391 ORTHO05D005193 7.4e-14 80.5 52 57.7
Solyc06g082680.4 Solanum lycopersicum HOM05D004391 ORTHO05D005193 7.4e-14 80.5 53 56.6
Sopen06g034070 Solanum pennellii HOM05D004391 ORTHO05D005193 7.4e-14 80.5 53 56.6
THA.LOC104823179 Tarenaya hassleriana HOM05D004391 ORTHO05D005193 7.4e-14 80.5 55 58.2
CAN.G181.27 Capsicum annuum HOM05D004391 ORTHO05D005193 9.7e-14 80.1 53 60.4
FAN25G0672 Fragaria x ananassa HOM05D004391 ORTHO05D000090 9.7e-14 80.1 53 64.2
Solyc06g007540.3 Solanum lycopersicum HOM05D004391 ORTHO05D005193 9.7e-14 80.1 53 56.6
Sopen06g002450 Solanum pennellii HOM05D004391 ORTHO05D005193 9.7e-14 80.1 53 56.6
TPR.G7542 Trifolium pratense HOM05D004391 ORTHO05D005193 9.7e-14 80.1 52 59.6
TAR369G0568 Trochodendron aralioides HOM05D004391 ORTHO05D005193 9.7e-14 80.1 53 60.4
GSVIVG01024535001 Vitis vinifera HOM05D004391 ORTHO05D005193 9.7e-14 80.1 53 62.3
CARHR085430 Cardamine hirsuta HOM05D004391 ORTHO05D005193 1.3e-13 79.7 54 57.4
Cfa009172 Carpinus fangiana HOM05D004391 ORTHO05D005193 1.3e-13 79.7 53 60.4
FvH4_3g40960 Fragaria vesca HOM05D004391 ORTHO05D005193 1.3e-13 79.7 53 62.3
FAN11G0346 Fragaria x ananassa HOM05D004391 ORTHO05D005193 1.3e-13 79.7 53 62.3
FAN16G3113 Fragaria x ananassa HOM05D004391 ORTHO05D005193 1.3e-13 79.7 53 62.3
Hma1.2p1_0170F.1_g075340 Hydrangea macrophylla HOM05D004391 ORTHO05D005193 1.3e-13 79.7 61 60.7
Nitab4.5_0003194g0030 Nicotiana tabacum HOM05D004391 ORTHO05D005193 1.3e-13 79.7 58 53.4
vmacro02862 Vaccinium macrocarpon HOM05D004391 ORTHO05D005193 1.3e-13 79.7 53 62.3
Aa31LG3G4110 Aethionema arabicum HOM05D004391 ORTHO05D005193 1.7e-13 79.3 57 54.4
AT3G10860 Arabidopsis thaliana HOM05D004391 ORTHO05D005193 1.7e-13 79.3 54 55.6
BolC1t05350H Brassica oleracea HOM05D004391 ORTHO05D005193 1.7e-13 79.3 54 53.7
CANSAT80G1344 Cannabis sativa HOM05D004391 ORTHO05D005193 1.7e-13 79.3 53 62.3
Carub.0003s1010 Capsella rubella HOM05D004391 ORTHO05D005193 1.7e-13 79.3 54 55.6
ECA248G3374 Erigeron canadensis HOM05D004391 ORTHO05D005193 1.7e-13 79.3 53 56.6
Gohir.D13G008800 Gossypium hirsutum HOM05D004391 ORTHO05D005193 1.7e-13 79.3 53 58.5
Lalb_Chr04g0251641 Lupinus albus HOM05D004391 ORTHO05D005193 1.7e-13 79.3 59 59.3
PGSC0003DMG400030477 Solanum tuberosum HOM05D004391 ORTHO05D005193 1.7e-13 79.3 53 54.7
Gohir.A05G404700 Gossypium hirsutum HOM05D004391 ORTHO05D005193 2.2e-13 79.0 53 58.5
Gorai.012G013200 Gossypium raimondii HOM05D004391 ORTHO05D005193 2.2e-13 79.0 53 58.5
Nitab4.5_0000105g0300 Nicotiana tabacum HOM05D004391 ORTHO05D005193 2.2e-13 79.0 53 58.5
Nitab4.5_0000311g0070 Nicotiana tabacum HOM05D004391 ORTHO05D005193 2.2e-13 79.0 60 56.7
Peaxi162Scf00131g10129 Petunia axillaris HOM05D004391 ORTHO05D005193 2.2e-13 79.0 53 56.6
Peaxi162Scf00455g00003 Petunia axillaris HOM05D004391 ORTHO05D005193 2.2e-13 79.0 53 56.6
Potri.013G159700 Populus trichocarpa HOM05D004391 ORTHO05D005193 2.2e-13 79.0 49 65.3
ClCG08G017940 Citrullus lanatus HOM05D004391 ORTHO05D005193 2.8e-13 78.6 54 61.1
Cc01_g15470 Coffea canephora HOM05D004391 ORTHO05D005193 2.8e-13 78.6 54 53.7
ECA236G4577 Erigeron canadensis HOM05D004391 ORTHO05D005193 2.8e-13 78.6 53 56.6
FAN21G2439 Fragaria x ananassa HOM05D004391 ORTHO05D005193 2.8e-13 78.6 53 62.3
Gohir.A13G008200 Gossypium hirsutum HOM05D004391 ORTHO05D005193 2.8e-13 78.6 53 56.6
PGSC0003DMG400020649 Solanum tuberosum HOM05D004391 ORTHO05D005193 2.8e-13 78.6 50 60.0
GSVIVG01024232001 Vitis vinifera HOM05D004391 ORTHO05D005193 2.8e-13 78.6 53 58.5
A05p38380 Brassica napus HOM05D004391 ORTHO05D005193 3.7e-13 78.2 54 53.7
C05p57280 Brassica napus HOM05D004391 ORTHO05D005193 3.7e-13 78.2 54 53.7
BolC5t34384H Brassica oleracea HOM05D004391 ORTHO05D005193 3.7e-13 78.2 54 53.7
BraA01t04219Z Brassica rapa HOM05D004391 ORTHO05D005193 3.7e-13 78.2 54 53.7
BraA05t22629Z Brassica rapa HOM05D004391 ORTHO05D005193 3.7e-13 78.2 54 53.7
CAN.G874.64 Capsicum annuum HOM05D004391 ORTHO05D005193 3.7e-13 78.2 53 54.7
Thhalv10021877m.g Eutrema salsugineum HOM05D004391 ORTHO05D005193 3.7e-13 78.2 54 53.7
Glyma.02G237700 Glycine max HOM05D004391 ORTHO05D005193 3.7e-13 78.2 51 60.8
Glyma.14G206700 Glycine max HOM05D004391 ORTHO05D005193 3.7e-13 78.2 51 60.8
Aa31LG3G3850 Aethionema arabicum HOM05D004391 ORTHO05D005193 4.8e-13 77.8 54 55.6
A03p02270 Brassica napus HOM05D004391 ORTHO05D005193 4.8e-13 77.8 54 51.9
CSS0036971 Camellia sinensis var. sinensis HOM05D004391 ORTHO05D005193 4.8e-13 77.8 52 61.5
HanXRQChr05g0158631 Helianthus annuus HOM05D004391 ORTHO05D005193 4.8e-13 77.8 53 54.7
Lsat_1_v5_gn_9_13380 Lactuca sativa HOM05D000838 ORTHO05D000656 4.8e-13 77.8 54 57.4
QL03p059558 Quercus lobata HOM05D004391 ORTHO05D005193 4.8e-13 77.8 53 60.4
Zm00001eb281780 Zea mays HOM05D004391 ORTHO05D005193 4.8e-13 77.8 52 61.5
COL.COLO4_19488 Corchorus olitorius HOM05D004391 ORTHO05D005193 6.3e-13 77.4 53 60.4
Gohir.D04G011000 Gossypium hirsutum HOM05D004391 ORTHO05D005193 6.3e-13 77.4 53 56.6
Gorai.013G009600 Gossypium raimondii HOM05D004391 ORTHO05D005193 6.3e-13 77.4 50 60.0
Medtr5g075690 Medicago truncatula HOM05D004391 ORTHO05D005193 6.3e-13 77.4 52 57.7
VMungo0647G0523 Vigna mungo HOM05D004391 ORTHO05D005193 6.3e-13 77.4 48 64.6
AL3G22380 Arabidopsis lyrata HOM05D004391 ORTHO05D005193 8.2e-13 77.0 54 53.7
Phvul.008G244100 Phaseolus vulgaris HOM05D004391 ORTHO05D005193 8.2e-13 77.0 64 54.7
Ah.05g177740 Amaranthus hybridus HOM05D004391 ORTHO05D005193 1.1e-12 76.6 53 58.5
MELO3C010670.2 Cucumis melo HOM05D004391 ORTHO05D005193 1.1e-12 76.6 53 60.4
Lalb_Chr10g0103971 Lupinus albus HOM05D004391 ORTHO05D005193 1.1e-12 76.6 59 54.2
Nitab4.5_0002902g0130 Nicotiana tabacum HOM05D004391 ORTHO05D005193 1.1e-12 76.6 50 60.0
Potri.019G132000 Populus trichocarpa HOM05D004391 ORTHO05D005193 1.1e-12 76.6 53 56.6
Sp3g09180 Schrenkiella parvula HOM05D004391 ORTHO05D005193 1.1e-12 76.6 54 51.9
arahy.Tifrunner.gnm1.ann1.M2MMUV Arachis hypogaea HOM05D004391 ORTHO05D005193 1.4e-12 76.3 59 57.6
CsaV3_2G024700 Cucumis sativus L. HOM05D004391 ORTHO05D005193 1.4e-12 76.3 53 58.5
Lsat_1_v5_gn_5_177220 Lactuca sativa HOM05D004391 ORTHO05D005193 1.4e-12 76.3 53 54.7
Nitab4.5_0002167g0040 Nicotiana tabacum HOM05D004391 ORTHO05D005193 1.4e-12 76.3 50 58.0
Aqoxy2G00689 Aquilegia oxysepala HOM05D004391 ORTHO05D005193 1.8e-12 75.9 51 58.8
Migut.D00804 Erythranthe guttata HOM05D004391 ORTHO05D005193 2.4e-12 75.5 53 58.5
AagrBONN_evm.TU.Sc2ySwM_362.2485 Anthoceros agrestis HOM05D004391 ORTHO05D005193 3.1e-12 75.1 54 59.3
AUR62013781 Chenopodium quinoa HOM05D004391 ORTHO05D005193 4.1e-12 74.7 53 54.7
AUR62023375 Chenopodium quinoa HOM05D004391 ORTHO05D005193 4.1e-12 74.7 53 54.7
Sed0004860 Sechium edule HOM05D004391 ORTHO05D005193 6.9e-12 73.9 52 59.6
FvH4_4g32870 Fragaria vesca HOM05D004391 ORTHO05D005193 9.1e-12 73.6 53 52.8
FAN07G1869 Fragaria x ananassa HOM05D004391 ORTHO05D005193 9.1e-12 73.6 53 52.8
FAN12G3281 Fragaria x ananassa HOM05D004391 ORTHO05D005193 9.1e-12 73.6 53 52.8
FAN17G0118 Fragaria x ananassa HOM05D004391 ORTHO05D005193 9.1e-12 73.6 53 52.8
FAN22G1549 Fragaria x ananassa HOM05D004391 ORTHO05D005193 9.1e-12 73.6 53 52.8
RcHm_v2.0_Chr4g0441891 Rosa chinensis HOM05D004391 ORTHO05D005193 9.1e-12 73.6 53 54.7
MD13G1094500 Malus domestica HOM05D004391 ORTHO05D005193 1.2e-11 73.2 58 51.7
Prupe.1G250900 Prunus persica HOM05D004391 ORTHO05D005193 1.2e-11 73.2 53 56.6
MD16G1095600 Malus domestica HOM05D004391 ORTHO05D005193 1.5e-11 72.8 58 51.7
Pp3c11_2590 Physcomitrium patens HOM05D004391 ORTHO05D005193 2.0e-11 72.4 54 51.9
Pp3c1_1570 Physcomitrium patens HOM05D004391 ORTHO05D005193 2.0e-11 72.4 54 51.9
Pp3c7_21160 Physcomitrium patens HOM05D004391 ORTHO05D005193 2.0e-11 72.4 54 51.9
SalBow3G4275 Salvia bowleyana HOM05D004391 ORTHO05D005193 2.0e-11 72.4 50 60.0
SGA_v2.0_scaffold122G33334 Striga asiatica HOM05D004391 ORTHO05D005193 2.0e-11 72.4 53 58.5
FvH4_4g07960 Fragaria vesca HOM05D004391 ORTHO05D005193 2.6e-11 72.0 53 60.4
Lsat_1_v5_gn_9_13340 Lactuca sativa HOM05D004391 ORTHO05D005193 5.9e-11 70.9 47 57.4
Lsat_1_v5_gn_8_98901 Lactuca sativa HOM05D004391 ORTHO05D005193 1.7e-10 69.3 47 57.4
Mapoly0036s0032 Marchantia polymorpha HOM05D004391 ORTHO05D005193 1.7e-10 69.3 57 45.6
SGA_v2.0_scaffold129G34161 Striga asiatica HOM05D004391 ORTHO05D005193 5.0e-10 67.8 51 58.8
Lsat_1_v5_gn_8_98921 Lactuca sativa HOM05D004391 ORTHO05D005193 1.2e-08 63.2 49 55.1
BcaB04g21171 Brassica carinata HOM05D004391 ORTHO05D005193 1.4e-07 59.7 46 50.0
BolC2t06197H Brassica oleracea HOM05D004391 ORTHO05D005193 2.3e-07 58.9 38 57.9
Mapoly0022s0089 Marchantia polymorpha HOM05D004391 ORTHO05D005193 2.3e-07 58.9 57 43.9
C02p02320 Brassica napus HOM05D004391 ORTHO05D005193 5.1e-07 57.8 36 61.1
DCAR_018583 Daucus carota HOM05D004391 ORTHO05D005193 6.7e-07 57.4 53 39.6
Pp3c13_7360 Physcomitrium patens HOM05D004391 ORTHO05D005193 8.8e-07 57.0 54 46.3


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