Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 0.0e+00 1404.8 711 100.0
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 2.6e-199 699.5 552 61.8
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 3.8e-198 695.7 558 60.6
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 5.0e-198 695.3 551 61.0
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 4.2e-197 692.2 544 60.7
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 5.5e-197 691.8 548 60.9
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 9.4e-197 691.0 544 60.5
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 1.2e-196 690.6 547 61.8
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 3.6e-196 689.1 544 60.5
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 6.1e-196 688.3 546 61.4
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 7.9e-196 688.0 544 61.4
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 8.8e-195 684.5 550 59.8
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 2.5e-194 682.9 550 60.4
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 2.5e-194 682.9 555 59.6
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 7.4e-194 681.4 553 60.2
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 9.7e-194 681.0 547 61.1
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 9.7e-194 681.0 560 58.4
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 9.7e-194 681.0 545 60.6
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 2.2e-193 679.9 552 59.8
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 2.8e-193 679.5 545 59.8
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 3.7e-193 679.1 557 58.3
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 6.3e-193 678.3 545 59.6
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 1.1e-192 677.6 559 59.7
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 1.1e-192 677.6 547 60.1
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 1.8e-192 676.8 566 58.1
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 2.4e-192 676.4 568 57.7
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 3.1e-192 676.0 548 59.7
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 6.9e-192 674.9 545 60.4
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 6.9e-192 674.9 545 60.2
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 9.1e-192 674.5 549 60.1
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 2.0e-191 673.3 552 59.4
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 3.4e-191 672.5 552 59.6
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 3.4e-191 672.5 568 58.5
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 7.7e-191 671.4 552 59.6
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 1.0e-190 671.0 552 59.1
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 1.3e-190 670.6 544 59.6
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 2.2e-190 669.8 546 59.0
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 3.8e-190 669.1 550 60.2
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 3.8e-190 669.1 545 60.0
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 1.1e-189 667.5 546 59.9
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 1.1e-189 667.5 544 60.1
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 1.4e-189 667.2 555 58.6
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 1.9e-189 666.8 566 57.8
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 2.5e-189 666.4 563 59.1
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 2.5e-189 666.4 568 57.9
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 2.5e-189 666.4 544 59.6
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 4.2e-189 665.6 552 58.9
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 9.4e-189 664.5 569 57.3
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 1.6e-188 663.7 560 58.2
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 2.7e-188 662.9 549 59.2
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 3.6e-188 662.5 586 56.7
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 6.1e-188 661.8 568 59.0
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 1.0e-187 661.0 543 59.5
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 1.4e-187 660.6 545 59.6
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.4e-187 660.6 562 58.2
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 3.9e-187 659.1 561 57.9
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 5.1e-187 658.7 548 58.9
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 6.7e-187 658.3 560 58.4
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 8.8e-187 657.9 575 57.0
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 1.1e-186 657.5 543 58.9
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 2.6e-186 656.4 558 57.9
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 2.6e-186 656.4 558 57.9
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 2.6e-186 656.4 574 56.8
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 3.3e-186 656.0 548 58.9
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 4.4e-186 655.6 557 57.8
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 1.3e-185 654.1 550 58.5
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 2.2e-185 653.3 550 57.8
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 3.7e-185 652.5 559 57.6
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 4.8e-185 652.1 544 58.5
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 7.0e-184 648.3 560 56.8
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 7.0e-184 648.3 546 57.0
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 3.5e-183 646.0 560 56.2
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.0e-182 644.4 560 56.6
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 1.3e-182 644.0 561 57.2
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 5.0e-182 642.1 560 56.1
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 5.5e-181 638.6 545 58.9
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.0e-179 634.4 560 55.5
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 4.0e-179 632.5 562 57.1
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 8.8e-179 631.3 559 56.7
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 2.0e-178 630.2 544 56.2
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 7.5e-178 628.2 560 57.0
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 1.3e-177 627.5 545 56.1
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 3.1e-176 622.9 560 56.2
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 4.1e-176 622.5 564 55.5
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 9.1e-176 621.3 545 57.8
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 1.7e-174 617.1 564 55.0
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 1.7e-174 617.1 564 55.0
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 1.9e-173 613.6 567 53.6
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 4.2e-173 612.5 559 56.4
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 5.5e-173 612.1 562 55.2
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 7.5e-170 601.7 568 54.0
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 9.8e-170 601.3 558 54.5
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 3.1e-168 596.3 562 54.3
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 1.7e-166 590.5 544 53.9
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 6.1e-164 582.0 570 51.9
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 4.4e-154 549.3 551 51.9
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 3.3e-149 533.1 573 48.9
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 4.0e-147 526.2 482 54.4
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 7.5e-146 521.9 563 48.3
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 9.2e-144 515.0 549 49.2
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 3.0e-110 403.7 349 56.4
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.4e-91 341.7 473 40.6
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 5.5e-80 303.1 217 65.0
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 5.3e-67 260.0 185 65.4
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 1.4e-59 235.3 171 64.9
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 3.5e-50 204.1 212 50.0
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 1.4e-35 155.6 210 38.1
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 9.5e-24 116.3 76 68.4
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 4.7e-23 114.0 67 73.1
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 6.2e-23 113.6 115 46.1
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 2.2e-20 105.1 65 70.8
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 8.3e-20 103.2 149 36.9
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 7.3e-16 90.1 83 57.8
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 8.9e-14 83.2 41 87.8


User provided reference genes

Program Settings