Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 2.5e-133 478.8 241 100.0
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 1.9e-69 266.5 199 66.8
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 3.6e-68 262.3 213 63.8
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 3.1e-67 259.2 213 61.5
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 3.1e-67 259.2 219 59.8
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 4.0e-67 258.8 199 64.8
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 9.0e-67 257.7 199 63.8
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 2.6e-66 256.1 219 59.8
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 5.8e-66 255.0 200 65.5
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 5.8e-66 255.0 199 63.8
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 7.6e-66 254.6 213 60.1
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 9.9e-66 254.2 213 61.0
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 9.9e-66 254.2 213 60.1
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 9.9e-66 254.2 213 59.2
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 1.3e-65 253.8 199 63.8
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 1.3e-65 253.8 199 64.8
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 1.3e-65 253.8 199 61.8
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 1.7e-65 253.4 213 62.4
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 2.9e-65 252.7 199 64.3
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 4.9e-65 251.9 199 61.8
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 4.9e-65 251.9 213 62.0
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 6.4e-65 251.5 199 61.3
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 6.4e-65 251.5 200 63.0
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 8.4e-65 251.1 199 62.8
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 1.1e-64 250.8 222 58.6
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 1.1e-64 250.8 213 60.6
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 1.4e-64 250.4 199 61.3
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 3.2e-64 249.2 216 59.3
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 3.2e-64 249.2 200 62.5
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 3.2e-64 249.2 208 60.6
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 4.2e-64 248.8 213 61.5
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 4.2e-64 248.8 199 61.3
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 4.2e-64 248.8 213 59.2
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 5.4e-64 248.4 202 58.4
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 7.1e-64 248.1 201 61.2
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 7.1e-64 248.1 205 60.0
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 1.6e-63 246.9 199 60.3
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 1.6e-63 246.9 199 62.3
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 1.6e-63 246.9 229 56.8
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 1.6e-63 246.9 199 61.8
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 2.1e-63 246.5 199 60.8
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 2.1e-63 246.5 199 61.8
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 2.1e-63 246.5 199 61.8
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 2.1e-63 246.5 199 59.8
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 2.7e-63 246.1 221 57.0
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 2.7e-63 246.1 205 59.0
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 3.5e-63 245.7 213 58.2
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 7.9e-63 244.6 198 58.1
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 7.9e-63 244.6 200 61.0
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 1.7e-62 243.4 200 62.0
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 2.3e-62 243.0 199 61.3
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 3.9e-62 242.3 212 58.0
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 8.7e-62 241.1 213 56.3
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 8.7e-62 241.1 198 63.1
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 1.1e-61 240.7 199 59.3
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 1.1e-61 240.7 199 59.8
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 1.5e-61 240.4 199 60.8
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 3.3e-61 239.2 205 58.0
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 4.3e-61 238.8 198 58.6
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 4.3e-61 238.8 200 62.0
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 7.4e-61 238.0 214 57.9
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 2.1e-60 236.5 212 57.5
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 2.8e-60 236.1 202 59.4
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 2.8e-60 236.1 213 57.3
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 4.8e-60 235.3 199 57.8
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 4.8e-60 235.3 199 58.8
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 8.1e-60 234.6 199 59.8
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 1.1e-59 234.2 200 58.0
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 1.4e-59 233.8 200 58.0
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 1.4e-59 233.8 200 58.0
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 5.3e-59 231.9 199 57.8
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 2.6e-58 229.6 204 57.8
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 9.9e-58 227.6 199 57.3
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 1.1e-56 224.2 222 54.5
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 1.4e-56 223.8 207 56.0
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 1.9e-56 223.4 244 50.8
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 2.4e-56 223.0 198 56.6
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 4.2e-56 222.2 227 52.4
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 6.0e-55 218.4 210 53.3
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 6.0e-47 191.8 167 58.1
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 2.1e-44 183.3 130 65.4
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 1.2e-42 177.6 140 62.9
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 3.4e-42 176.0 138 63.0
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 1.0e-41 174.5 138 61.6
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 6.5e-41 171.8 138 60.9
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 1.2e-39 167.5 232 40.9
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 4.6e-39 165.6 138 56.5
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 1.0e-38 164.5 124 66.1
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 1.0e-38 164.5 142 57.7
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 1.5e-37 160.6 212 45.8
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 2.8e-36 156.4 217 44.2
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 6.9e-35 151.8 213 46.5
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 1.7e-33 147.1 198 44.9
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 2.3e-30 136.7 235 39.1
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 1.1e-29 134.4 125 54.4
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 7.7e-26 121.7 205 35.1
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 7.0e-11 72.0 59 57.6
AUR62041050 Chenopodium quinoa HOM05D007061 ORTHO05D009017 7.0e-11 72.0 59 59.3
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 5.9e-10 68.9 118 32.2
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 4.2e-08 62.8 45 64.4
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 7.2e-08 62.0 59 49.2


User provided reference genes

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