Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31760 Sequoiadendron giganteum HOM05D006774 ORTHO05D008411 1.1e-83 313.5 188 100.0
SEGI_30451 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 2.1e-15 86.7 62 77.4
SEGI_07543 Sequoiadendron giganteum HOM05D000412 ORTHO05D000429 4.5e-13 79.0 97 57.7
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 1.3e-12 77.4 80 72.5
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 1.4e-11 73.9 83 68.7
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 3.2e-11 72.8 80 51.2
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 5.4e-11 72.0 75 68.0
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 9.3e-11 71.2 77 62.3
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 9.3e-11 71.2 78 64.1
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 1.6e-10 70.5 78 64.1
SEGI_25051 Sequoiadendron giganteum HOM05D002159 ORTHO05D007297 1.6e-10 70.5 71 59.2
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 2.1e-10 70.1 75 66.7
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 2.7e-10 69.7 81 46.9
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 2.7e-10 69.7 81 67.9
SEGI_33061 Sequoiadendron giganteum HOM05D000596 ORTHO05D009930 2.7e-10 69.7 81 54.3
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 2.7e-10 69.7 78 64.1
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 6.0e-10 68.6 78 59.0
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 6.0e-10 68.6 78 69.2
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 7.9e-10 68.2 81 61.7
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 1.0e-09 67.8 80 56.2
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 1.3e-09 67.4 79 64.6
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 1.8e-09 67.0 78 65.4
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 1.8e-09 67.0 78 60.3
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 1.8e-09 67.0 75 64.0
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 3.0e-09 66.2 78 50.0
Ca_05814_v3 Cicer arietinum L. HOM05D006774 ORTHO05D008411 3.0e-09 66.2 82 58.5
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 3.9e-09 65.9 82 54.9
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 3.9e-09 65.9 78 60.3
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 5.1e-09 65.5 77 61.0
SEGI_07928 Sequoiadendron giganteum HOM05D001629 ORTHO05D008411 5.1e-09 65.5 74 55.4
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 6.7e-09 65.1 78 60.3
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 6.7e-09 65.1 83 65.1
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 6.7e-09 65.1 81 64.2
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 8.7e-09 64.7 79 64.6
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 8.7e-09 64.7 81 66.7
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 1.9e-08 63.5 79 53.2
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 2.5e-08 63.2 48 58.3
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 2.5e-08 63.2 77 59.7
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 3.3e-08 62.8 82 62.2
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 5.6e-08 62.0 79 43.0
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 7.4e-08 61.6 78 57.7
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 9.6e-08 61.2 80 55.0
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 1.3e-07 60.8 78 67.9
CsaV3_1G038960 Cucumis sativus L. HOM05D006774 ORTHO05D008411 1.3e-07 60.8 77 55.8
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 1.3e-07 60.8 80 67.5
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 1.6e-07 60.5 74 74.3
Lj1g0013332 Lotus japonicus HOM05D006774 ORTHO05D008411 2.1e-07 60.1 47 59.6
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 2.1e-07 60.1 71 69.0
Oeu051834.1 Olea europaea HOM05D006774 ORTHO05D008411 2.1e-07 60.1 78 65.4
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 2.8e-07 59.7 80 55.0
CSS0005750 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 3.7e-07 59.3 75 65.3
Duzib128G0809 Durio zibethinus HOM05D006774 ORTHO05D008411 3.7e-07 59.3 88 56.8
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 3.7e-07 59.3 78 55.1
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 6.2e-07 58.5 78 50.0
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 6.2e-07 58.5 81 39.5
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 6.2e-07 58.5 81 39.5
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 8.1e-07 58.2 78 53.8
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.1e-06 57.8 48 54.2
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.1e-06 57.8 48 54.2
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.1e-06 57.8 48 54.2
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 1.1e-06 57.8 82 62.2
SEGI_04418 Sequoiadendron giganteum HOM05D001629 ORTHO05D003842 1.1e-06 57.8 99 47.5
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 1.1e-06 57.8 79 63.3
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 1.8e-06 57.0 82 52.4
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 2.4e-06 56.6 48 52.1
RcHm_v2.0_Chr3g0454971 Rosa chinensis HOM05D006774 ORTHO05D008411 2.4e-06 56.6 47 55.3
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 3.1e-06 56.2 47 55.3
Sed0009699 Sechium edule HOM05D006774 ORTHO05D008411 4.0e-06 55.8 78 51.3
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 5.3e-06 55.5 83 36.1
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 5.3e-06 55.5 79 60.8
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 6.9e-06 55.1 82 50.0
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 9.0e-06 54.7 81 58.0
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 9.0e-06 54.7 47 55.3


User provided reference genes

Program Settings