Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 0.0e+00 1153.3 580 100.0
SEGI_13863 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 1.5e-72 278.1 140 100.0
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 5.2e-36 156.8 207 38.2
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 2.5e-30 137.9 209 34.4
SMO165G0083 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 1.2e-29 135.6 209 34.4
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 6.8e-28 129.8 221 30.3
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 4.4e-27 127.1 306 26.8
AagrBONN_evm.TU.Sc2ySwM_369.432 Anthoceros agrestis HOM05D008307 ORTHO05D010374 7.5e-27 126.3 271 31.4
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 1.3e-26 125.6 222 29.7
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 3.7e-26 124.0 331 26.6
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 8.3e-26 122.9 229 30.1
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 1.1e-25 122.5 216 29.2
Pp3c5_17310 Physcomitrium patens HOM05D008307 ORTHO05D010374 4.1e-25 120.6 197 33.5
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 2.0e-24 118.2 220 27.7
SMO329G0060 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 3.5e-24 117.5 198 35.4
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 1.3e-23 115.5 227 29.1
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 5.0e-23 113.6 238 26.9
Mapoly0004s0145 Marchantia polymorpha HOM05D008307 ORTHO05D010374 4.3e-22 110.5 206 32.0
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 5.6e-22 110.2 153 37.9
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 2.1e-21 108.2 220 26.8
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 2.8e-21 107.8 348 22.7
Pp3c6_16530 Physcomitrium patens HOM05D008307 ORTHO05D010374 3.6e-21 107.5 198 33.8
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 3.6e-21 107.5 149 38.3
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 4.7e-21 107.1 219 27.4
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 2.3e-20 104.8 220 26.4
MSTRG.18114 Avicennia marina HOM05D008757 ORTHO05D010583 3.1e-20 104.4 215 28.4
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 5.2e-20 103.6 163 33.7
Potri.010G070001 Populus trichocarpa HOM05D008307 ORTHO05D010374 5.2e-20 103.6 212 34.0
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 1.5e-19 102.1 151 38.4
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 1.5e-19 102.1 217 29.0
Aqoxy7G00920 Aquilegia oxysepala HOM05D008307 ORTHO05D010374 4.4e-19 100.5 205 30.2
Thhalv10020149m.g Eutrema salsugineum HOM05D008307 ORTHO05D010374 5.8e-19 100.1 187 29.9
Nitab4.5_0000906g0100 Nicotiana tabacum HOM05D008757 ORTHO05D010583 2.2e-18 98.2 221 27.1
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 2.2e-18 98.2 216 26.9
Nitab4.5_0000116g0030 Nicotiana tabacum HOM05D008757 ORTHO05D010583 2.9e-18 97.8 212 28.3
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 2.9e-18 97.8 223 26.5
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 6.4e-18 96.7 149 36.2
Rhsim04G0177000 Rhododendron simsii HOM05D008307 ORTHO05D010374 6.4e-18 96.7 151 37.1
Hma1.2p1_1302F.1_g274300 Hydrangea macrophylla HOM05D008757 ORTHO05D010583 2.4e-17 94.7 161 31.1
Dinv29844 Davidia involucrata HOM05D008307 ORTHO05D010374 3.2e-17 94.4 151 33.8
QL06p018536 Quercus lobata HOM05D008307 ORTHO05D010374 3.2e-17 94.4 153 34.0
RcHm_v2.0_Chr4g0393941 Rosa chinensis HOM05D008307 ORTHO05D010374 3.2e-17 94.4 158 36.7
CARHR099340 Cardamine hirsuta HOM05D008307 ORTHO05D010374 4.1e-17 94.0 193 26.4
Migut.D00097 Erythranthe guttata HOM05D008757 ORTHO05D010583 4.1e-17 94.0 212 28.8
Peaxi162Scf00001g00251 Petunia axillaris HOM05D008757 ORTHO05D010583 5.4e-17 93.6 224 26.8
CSS0044876 Camellia sinensis var. sinensis HOM05D008307 ORTHO05D010374 1.2e-16 92.4 150 37.3
Haze_11405 Corylus avellana HOM05D008307 ORTHO05D010374 2.0e-16 91.7 182 29.1
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 4.6e-16 90.5 170 29.4
Solyc01g079630.3 Solanum lycopersicum HOM05D008757 ORTHO05D010583 4.6e-16 90.5 227 25.6
Sopen01g031410 Solanum pennellii HOM05D008757 ORTHO05D010583 4.6e-16 90.5 227 25.6
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 1.3e-15 89.0 187 27.8
Peaxi162Scf00041g00209 Petunia axillaris HOM05D008307 ORTHO05D010374 1.3e-15 89.0 168 32.7
BraA07t28701Z Brassica rapa HOM05D008307 ORTHO05D010374 2.3e-15 88.2 147 34.0
Cfa014722 Carpinus fangiana HOM05D008307 ORTHO05D010374 2.3e-15 88.2 182 28.6
MD16G1220900 Malus domestica HOM05D008307 ORTHO05D010374 2.3e-15 88.2 152 34.2
SGA_v2.0_scaffold334G49056 Striga asiatica HOM05D008757 ORTHO05D010583 2.3e-15 88.2 230 25.7
FAN08G1681 Fragaria x ananassa HOM05D008757 ORTHO05D010583 3.0e-15 87.8 129 32.6
FAN18G1448 Fragaria x ananassa HOM05D008757 ORTHO05D010583 3.0e-15 87.8 129 32.6
Prupe.1G041400 Prunus persica HOM05D008307 ORTHO05D010374 3.0e-15 87.8 154 34.4
PGR031G2080 Punica granatum HOM05D008307 ORTHO05D010374 3.0e-15 87.8 209 29.2
TWI73G0959 Tripterygium wilfordii HOM05D008307 ORTHO05D010374 3.9e-15 87.4 216 29.2
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 5.0e-15 87.0 175 27.4
THA.LOC104822237 Tarenaya hassleriana HOM05D008307 ORTHO05D010374 5.0e-15 87.0 283 24.4
GSVIVG01028089001 Vitis vinifera HOM05D008757 ORTHO05D010583 6.6e-15 86.7 221 27.6
FAN13G0940 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.5e-14 85.5 129 31.8
A07p09070 Brassica napus HOM05D008307 ORTHO05D010374 1.9e-14 85.1 147 33.3
FvH4_5g39560 Fragaria vesca HOM05D008757 ORTHO05D010583 1.9e-14 85.1 129 32.6
Prupe.8G269900 Prunus persica HOM05D008757 ORTHO05D010583 1.9e-14 85.1 160 28.8
vmacro08510 Vaccinium macrocarpon HOM05D008307 ORTHO05D010374 1.9e-14 85.1 151 35.1
RcHm_v2.0_Chr7g0241871 Rosa chinensis HOM05D008757 ORTHO05D010583 7.3e-14 83.2 125 32.0
BcaC06g35512 Brassica carinata HOM05D008307 ORTHO05D010374 9.5e-14 82.8 147 32.0
C07p14040 Brassica napus HOM05D008307 ORTHO05D010374 9.5e-14 82.8 147 32.0
BolC7t41901H Brassica oleracea HOM05D008307 ORTHO05D010374 9.5e-14 82.8 147 32.0
FvH4_4g03920 Fragaria vesca HOM05D008307 ORTHO05D010374 1.6e-13 82.0 156 32.1
FAN04G1474 Fragaria x ananassa HOM05D008757 ORTHO05D010583 1.6e-13 82.0 129 30.2
FAN17G2370 Fragaria x ananassa HOM05D000478 ORTHO05D010374 1.6e-13 82.0 157 33.1
FAN22G1022 Fragaria x ananassa HOM05D000478 ORTHO05D010374 1.6e-13 82.0 157 33.1
Haze_05014 Corylus avellana HOM05D008757 ORTHO05D010583 2.1e-13 81.6 341 21.4
Nitab4.5_0000044g0470 Nicotiana tabacum HOM05D008307 ORTHO05D010374 2.8e-13 81.3 154 30.5
Carub.0003s2363 Capsella rubella HOM05D008307 ORTHO05D010374 3.6e-13 80.9 183 28.4
DCAR_024261 Daucus carota HOM05D008307 ORTHO05D010374 6.2e-13 80.1 152 34.9
COL.COLO4_15896 Corchorus olitorius HOM05D008307 ORTHO05D010374 8.1e-13 79.7 132 34.1
PGSC0003DMG400017215 Solanum tuberosum HOM05D008307 ORTHO05D010374 8.1e-13 79.7 172 27.9
DCAR_027325 Daucus carota HOM05D008307 ORTHO05D010374 1.1e-12 79.3 109 40.4
MD11G1316900 Malus domestica HOM05D008757 ORTHO05D010583 3.1e-12 77.8 156 28.2
Cc08_g11800 Coffea canephora HOM05D008757 ORTHO05D010583 5.2e-12 77.0 133 28.6
A09p54480 Brassica napus HOM05D012658 ORTHO05D010583 2.6e-11 74.7 163 27.0
Nitab4.5_0007280g0010 Nicotiana tabacum HOM05D008307 ORTHO05D010374 3.4e-11 74.3 182 28.0
THA.LOC104817467 Tarenaya hassleriana HOM05D012658 ORTHO05D010583 3.4e-11 74.3 135 30.4
FAN12G4262 Fragaria x ananassa HOM05D000478 ORTHO05D010374 4.4e-11 73.9 164 29.9
BraA09t40861Z Brassica rapa HOM05D012658 ORTHO05D010583 7.5e-11 73.2 163 27.0
CAN.G220.11 Capsicum annuum HOM05D008307 ORTHO05D010374 7.5e-11 73.2 187 27.3
Solyc09g090290.3 Solanum lycopersicum HOM05D008307 ORTHO05D010374 9.8e-11 72.8 179 28.5
Sopen09g033190 Solanum pennellii HOM05D008307 ORTHO05D010374 9.8e-11 72.8 179 29.1
BcaC07g40736 Brassica carinata HOM05D012658 ORTHO05D010583 1.7e-10 72.0 127 27.6
BcaC07g40779 Brassica carinata HOM05D012658 ORTHO05D010583 2.2e-10 71.6 127 28.3
BolC8t51315H Brassica oleracea HOM05D012658 ORTHO05D010583 2.2e-10 71.6 127 27.6
Migut.N00284 Erythranthe guttata HOM05D008307 ORTHO05D010374 6.4e-10 70.1 152 32.2
Cc03_g05710 Coffea canephora HOM05D008307 ORTHO05D010374 1.4e-09 68.9 157 29.3
AT3G62620 Arabidopsis thaliana HOM05D012658 ORTHO05D010583 4.1e-09 67.4 127 28.3
C08p37370 Brassica napus HOM05D012658 ORTHO05D010583 4.1e-09 67.4 127 26.8
AL5G45370 Arabidopsis lyrata HOM05D012658 ORTHO05D010583 7.1e-09 66.6 128 29.7
A05p34600 Brassica napus HOM05D012658 ORTHO05D010583 7.1e-09 66.6 129 27.1
Thhalv10006051m.g Eutrema salsugineum HOM05D012658 ORTHO05D010583 9.2e-09 66.2 130 26.9
CARHR172890 Cardamine hirsuta HOM05D012658 ORTHO05D010583 2.3e-07 61.6 127 27.6
Carub.0005s2928 Capsella rubella HOM05D012658 ORTHO05D010583 3.9e-07 60.8 127 27.6
Gorai.011G175900 Gossypium raimondii HOM05D008307 ORTHO05D010374 5.1e-07 60.5 83 41.0
SGA_v2.0_scaffold31G12662 Striga asiatica HOM05D008307 ORTHO05D010374 5.1e-07 60.5 115 34.8
Gohir.D10G155880 Gossypium hirsutum HOM05D008307 ORTHO05D010374 2.5e-06 58.2 83 38.6


User provided reference genes

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