Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31717 Sequoiadendron giganteum HOM05D000797 ORTHO05D007726 2.4e-84 315.5 160 100.0
ATR0796G192 Amborella trichopoda HOM05D000797 ORTHO05D007726 1.5e-30 136.7 77 83.1
QL06p010151 Quercus lobata HOM05D000797 ORTHO05D007726 1.5e-30 136.7 153 52.9
Prupe.1G132500 Prunus persica HOM05D000797 ORTHO05D007726 2.6e-30 136.0 91 71.4
Lsat_1_v5_gn_3_24121 Lactuca sativa HOM05D000797 ORTHO05D007726 4.5e-30 135.2 154 50.0
ECA246G2476 Erigeron canadensis HOM05D000797 ORTHO05D007726 5.8e-30 134.8 112 59.8
Cfa014702 Carpinus fangiana HOM05D000797 ORTHO05D007726 9.9e-30 134.0 101 64.4
PSO210G3438 Papaver somniferum HOM05D000797 ORTHO05D007726 2.2e-29 132.9 96 68.8
PSO832G1872 Papaver somniferum HOM05D000797 ORTHO05D007726 2.2e-29 132.9 96 68.8
GSVIVG01035121001 Vitis vinifera HOM05D000797 ORTHO05D007726 2.9e-29 132.5 95 69.5
Cc03_g01610 Coffea canephora HOM05D000797 ORTHO05D007726 3.8e-29 132.1 77 79.2
Sopen01g028100 Solanum pennellii HOM05D000797 ORTHO05D007726 3.8e-29 132.1 121 56.2
CSS0044303 Camellia sinensis var. sinensis HOM05D000797 ORTHO05D007726 4.9e-29 131.7 113 61.9
PGSC0003DMG400011330 Solanum tuberosum HOM05D000797 ORTHO05D007726 4.9e-29 131.7 102 61.8
TAR362G0149 Trochodendron aralioides HOM05D001727 ORTHO05D007726 4.9e-29 131.7 77 79.2
RcHm_v2.0_Chr4g0423151 Rosa chinensis HOM05D000797 ORTHO05D007726 6.4e-29 131.3 96 65.6
CAN.G1137.1 Capsicum annuum HOM05D000797 ORTHO05D007726 8.4e-29 131.0 77 76.6
Lj4g0021722 Lotus japonicus HOM05D004309 ORTHO05D007726 8.4e-29 131.0 77 77.9
Mapoly0127s0040 Marchantia polymorpha HOM05D000797 ORTHO05D007726 8.4e-29 131.0 76 80.3
Manes.03G198100 Manihot esculenta HOM05D000797 ORTHO05D007726 1.4e-28 130.2 77 77.9
Thecc.04G288000 Theobroma cacao HOM05D000797 ORTHO05D007726 1.9e-28 129.8 94 69.1
CiPaw.01G145900 Carya illinoinensis HOM05D000797 ORTHO05D007726 3.2e-28 129.0 84 70.2
Migut.G00134 Erythranthe guttata HOM05D000797 ORTHO05D007726 3.2e-28 129.0 77 79.2
MBI19_g34790_MAGBIO Magnolia biondii HOM05D000797 ORTHO05D007726 4.2e-28 128.6 142 52.1
Actinidia40296 Actinidia chinensis HOM05D000797 ORTHO05D007726 5.4e-28 128.3 80 75.0
HanXRQChr17g0536081 Helianthus annuus HOM05D000797 ORTHO05D007726 5.4e-28 128.3 109 60.6
Potri.008G219700 Populus trichocarpa HOM05D000797 ORTHO05D007726 5.4e-28 128.3 100 67.0
PGR004G0333 Punica granatum HOM05D000797 ORTHO05D007726 5.4e-28 128.3 95 65.3
Hma1.2p1_0804F.1_g221000 Hydrangea macrophylla HOM05D000797 ORTHO05D007726 7.1e-28 127.9 89 73.0
Solyc01g066520.3 Solanum lycopersicum HOM05D000797 ORTHO05D007726 7.1e-28 127.9 121 55.4
DCAR_027056 Daucus carota HOM05D004309 ORTHO05D005588 9.3e-28 127.5 110 64.5
HPP92_002152 Vanilla planifolia HOM05D000797 ORTHO05D007726 9.3e-28 127.5 88 72.7
EL10Ac3g06632 Beta vulgaris HOM05D000797 ORTHO05D007726 1.2e-27 127.1 75 80.0
Duzib212G0824 Durio zibethinus HOM05D000797 ORTHO05D007726 1.2e-27 127.1 103 62.1
Medtr4g120220 Medicago truncatula HOM05D000797 ORTHO05D007726 1.2e-27 127.1 77 79.2
Nitab4.5_0000695g0030 Nicotiana tabacum HOM05D000797 ORTHO05D007726 1.2e-27 127.1 79 74.7
Nitab4.5_0005312g0020 Nicotiana tabacum HOM05D000797 ORTHO05D007726 1.2e-27 127.1 132 50.8
Psat4g026280 Pisum sativum HOM05D000797 ORTHO05D007726 1.6e-27 126.7 77 77.9
Aqoxy5G00779 Aquilegia oxysepala HOM05D000797 ORTHO05D007726 2.7e-27 125.9 96 66.7
Cpa.g.sc50.171 Carica papaya HOM05D000797 ORTHO05D007726 2.7e-27 125.9 75 77.3
Eucgr.H03953 Eucalyptus grandis HOM05D000797 ORTHO05D007726 2.7e-27 125.9 77 75.3
FAN07G0695 Fragaria x ananassa HOM05D005069 ORTHO05D006024 3.5e-27 125.6 89 66.3
Glyma.17G028000 Glycine max HOM05D000797 ORTHO05D007726 3.5e-27 125.6 77 75.3
Hund20525 Selenicereus undatus HOM05D000797 ORTHO05D007726 3.5e-27 125.6 76 80.3
AUR62018093 Chenopodium quinoa HOM05D000797 ORTHO05D007726 4.6e-27 125.2 87 70.1
MELO3C006679.2 Cucumis melo HOM05D000797 ORTHO05D007726 4.6e-27 125.2 77 75.3
CsaV3_3G014830 Cucumis sativus L. HOM05D000797 ORTHO05D007726 4.6e-27 125.2 77 75.3
FvH4_4g18561 Fragaria vesca HOM05D000797 ORTHO05D007726 4.6e-27 125.2 88 68.2
Gohir.A09G237700 Gossypium hirsutum HOM05D000797 ORTHO05D007726 6.0e-27 124.8 78 75.6
Nn3g21531 Nelumbo nucifera HOM05D000797 ORTHO05D007726 6.0e-27 124.8 95 67.4
Sed0017832 Sechium edule HOM05D000797 ORTHO05D007726 6.0e-27 124.8 77 79.2
Atru.chr4.2892 Acer truncatum HOM05D000797 ORTHO05D007726 7.9e-27 124.4 99 62.6
Ca_21482_v3 Cicer arietinum L. HOM05D000797 ORTHO05D007726 7.9e-27 124.4 75 81.3
COL.COLO4_13828 Corchorus olitorius HOM05D005069 ORTHO05D006024 7.9e-27 124.4 81 75.3
Gohir.D09G238600 Gossypium hirsutum HOM05D000797 ORTHO05D007726 7.9e-27 124.4 78 75.6
Gorai.006G261300 Gossypium raimondii HOM05D000797 ORTHO05D007726 7.9e-27 124.4 78 75.6
TPR.G3182 Trifolium pratense HOM05D000797 ORTHO05D007726 7.9e-27 124.4 72 83.3
Zm00001eb130640 Zea mays HOM05D000797 ORTHO05D007726 7.9e-27 124.4 73 78.1
arahy.Tifrunner.gnm1.ann1.BZZQ7R Arachis hypogaea HOM05D000797 ORTHO05D007726 1.0e-26 124.0 77 76.6
arahy.Tifrunner.gnm1.ann1.YC35GQ Arachis hypogaea HOM05D004309 ORTHO05D007726 1.0e-26 124.0 77 76.6
MSTRG.10111 Avicennia marina HOM05D000797 ORTHO05D007726 1.0e-26 124.0 77 75.3
THA.LOC104818913 Tarenaya hassleriana HOM05D000797 ORTHO05D007726 1.0e-26 124.0 78 74.4
Glyma.07G246000 Glycine max HOM05D000797 ORTHO05D007726 1.3e-26 123.6 77 75.3
Lalb_Chr12g0196651 Lupinus albus HOM05D000797 ORTHO05D007726 1.3e-26 123.6 72 77.8
Potri.010G011300 Populus trichocarpa HOM05D000797 ORTHO05D007726 1.3e-26 123.6 73 78.1
Pp3c7_200 Physcomitrium patens HOM05D000797 ORTHO05D007726 1.8e-26 123.2 86 67.4
C03p42490 Brassica napus HOM05D000797 ORTHO05D007726 2.3e-26 122.9 86 67.4
BolC3t16519H Brassica oleracea HOM05D000797 ORTHO05D007726 2.3e-26 122.9 86 67.4
BraA03t12671Z Brassica rapa HOM05D000797 ORTHO05D007726 2.3e-26 122.9 89 65.2
HanXRQChr03g0089531 Helianthus annuus HOM05D000797 ORTHO05D007726 2.3e-26 122.9 99 60.6
Ciclev10004761m.g Citrus clementina HOM05D000797 ORTHO05D007726 3.0e-26 122.5 112 57.1
TWI09G1463 Tripterygium wilfordii HOM05D000797 ORTHO05D007726 3.0e-26 122.5 72 79.2
CANSAT78G2398 Cannabis sativa HOM05D000797 ORTHO05D007726 3.9e-26 122.1 74 77.0
SGA_v2.0_scaffold67G22605 Striga asiatica HOM05D000797 ORTHO05D007726 3.9e-26 122.1 77 74.0
A03p34910 Brassica napus HOM05D000797 ORTHO05D007726 5.1e-26 121.7 86 67.4
Rhsim04G0224800 Rhododendron simsii HOM05D000797 ORTHO05D007726 5.1e-26 121.7 73 78.1
Sabra10G0007300 Salix brachista HOM05D000797 ORTHO05D007726 5.1e-26 121.7 87 67.8
Carub.0003s0638 Capsella rubella HOM05D000797 ORTHO05D007726 6.7e-26 121.3 86 67.4
Phvul.003G106700 Phaseolus vulgaris HOM05D000797 ORTHO05D007726 6.7e-26 121.3 77 74.0
Sc13g0003290 Simmondsia chinensis HOM05D000797 ORTHO05D007726 6.7e-26 121.3 80 75.0
AagrBONN_evm.TU.Sc2ySwM_344.4087 Anthoceros agrestis HOM05D000797 ORTHO05D007726 8.7e-26 120.9 90 64.4
Thhalv10020615m.g Eutrema salsugineum HOM05D000797 ORTHO05D007726 1.1e-25 120.6 87 65.5
VMungo1215G0560 Vigna mungo HOM05D000797 ORTHO05D007726 1.1e-25 120.6 77 75.3
AL3G17970 Arabidopsis lyrata HOM05D000797 ORTHO05D007726 1.5e-25 120.2 86 66.3
AUR62032016 Chenopodium quinoa HOM05D000797 ORTHO05D007726 1.5e-25 120.2 77 75.3
Sp3g05810 Schrenkiella parvula HOM05D000797 ORTHO05D007726 2.5e-25 119.4 86 66.3
AT3G06850 Arabidopsis thaliana HOM05D000797 ORTHO05D007726 3.3e-25 119.0 86 66.3
CARHR081460 Cardamine hirsuta HOM05D000797 ORTHO05D007726 3.3e-25 119.0 86 66.3
TWI73G1204 Tripterygium wilfordii HOM05D000797 ORTHO05D007726 4.3e-25 118.6 71 77.5
Os01g0314100 Oryza sativa ssp. japonica HOM05D000797 ORTHO05D007726 7.4e-25 117.9 73 76.7
SMO356G0665 Selaginella moellendorffii HOM05D000797 ORTHO05D007726 1.8e-23 113.2 67 76.1
ClCG05G006220 Citrullus lanatus HOM05D000797 ORTHO05D007726 4.0e-23 112.1 99 58.6
PRCOL_00005061 Prasinoderma coloniale HOM05D000797 ORTHO05D007726 3.2e-20 102.4 75 58.7
Cre04.g228350 Chlamydomonas reinhardtii HOM05D000797 ORTHO05D007726 3.1e-15 85.9 68 60.3
MD13G1165700 Malus domestica HOM05D000797 ORTHO05D007726 2.9e-13 79.3 45 82.2
Actinidia19577 Actinidia chinensis HOM05D000797 ORTHO05D007726 3.8e-13 79.0 55 67.3
unitig_748.g8725 Utricularia gibba HOM05D000797 ORTHO05D007726 4.2e-12 75.5 71 52.1
Peaxi162Scf00065g01524 Petunia axillaris HOM05D000797 ORTHO05D007726 5.5e-12 75.1 49 69.4
vmacro08180 Vaccinium macrocarpon HOM05D000797 ORTHO05D007726 9.3e-12 74.3 49 71.4
AagrBONN_evm.TU.Sc2ySwM_344.4084 Anthoceros agrestis HOM05D000797 ORTHO05D007726 6.7e-10 68.2 44 59.1
TPR.G28957 Trifolium pratense HOM05D000201 ORTHO05D000421 6.7e-10 68.2 43 76.7
Haze_13326 Corylus avellana HOM05D000797 ORTHO05D007726 2.2e-08 63.2 58 58.6
Hma1.2p1_0804F.1_g220990 Hydrangea macrophylla HOM05D000797 ORTHO05D007726 3.7e-08 62.4 59 59.3
Ah.04g153650 Amaranthus hybridus HOM05D000797 ORTHO05D007726 1.1e-07 60.8 71 52.1
Lsat_1_v5_gn_4_18420 Lactuca sativa HOM05D000797 ORTHO05D007726 1.2e-06 57.4 47 59.6
HPP92_002232 Vanilla planifolia HOM05D000797 ORTHO05D007726 1.2e-06 57.4 53 54.7
Aa31LG5G17430 Aethionema arabicum HOM05D000797 ORTHO05D007726 2.6e-06 56.2 48 58.3


User provided reference genes

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