Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31630 Sequoiadendron giganteum HOM05D034121 ORTHO05D385425 0.0e+00 1238.4 746 100.0
SEGI_17984 Sequoiadendron giganteum HOM05D034121 ORTHO05D384451 2.2e-228 796.2 720 70.3
SEGI_17625 Sequoiadendron giganteum HOM05D034121 ORTHO05D386655 5.1e-153 545.8 760 50.4
SEGI_01631 Sequoiadendron giganteum HOM05D000234 ORTHO05D000335 6.7e-28 130.2 498 27.1
SEGI_27000 Sequoiadendron giganteum HOM05D000234 ORTHO05D000335 7.4e-19 100.1 474 25.1
SEGI_15934 Sequoiadendron giganteum HOM05D000234 ORTHO05D000335 5.9e-16 90.5 472 22.9
C06p36960 Brassica napus HOM05D000234 ORTHO05D000335 5.0e-15 87.4 450 24.0
BcaC08g45891 Brassica carinata HOM05D000234 ORTHO05D000335 1.1e-14 86.3 450 23.8
BolC6t38806H Brassica oleracea HOM05D000234 ORTHO05D000335 1.1e-14 86.3 450 23.8
BraA07t30789Z Brassica rapa HOM05D000234 ORTHO05D000335 1.1e-14 86.3 450 23.8
CARHR062360 Cardamine hirsuta HOM05D000234 ORTHO05D000335 1.1e-14 86.3 455 25.1
A07p31620 Brassica napus HOM05D000234 ORTHO05D000335 3.2e-14 84.7 450 23.8
Aqoxy3G03497 Aquilegia oxysepala HOM05D000234 ORTHO05D000335 2.6e-11 75.1 476 22.9
Oeu045613.1 Olea europaea HOM05D000234 ORTHO05D000335 4.4e-11 74.3 471 21.4
CDE02G4258 Ceratophyllum demersum HOM05D000234 ORTHO05D000335 7.4e-11 73.6 469 22.8
CDE04G3411 Ceratophyllum demersum HOM05D000234 ORTHO05D000335 7.4e-11 73.6 471 22.7
Lalb_Chr17g0340891 Lupinus albus HOM05D000234 ORTHO05D000335 1.8e-09 68.9 290 26.6
Dinv16691 Davidia involucrata HOM05D000234 ORTHO05D000335 2.4e-09 68.6 288 26.7
Cpa.g.sc1.68 Carica papaya HOM05D000234 ORTHO05D000335 2.6e-08 65.1 291 26.5
Gohir.D13G078200 Gossypium hirsutum HOM05D000234 ORTHO05D000335 2.6e-08 65.1 301 25.9
COL.COLO4_27969 Corchorus olitorius HOM05D000234 ORTHO05D000335 3.4e-08 64.7 291 25.1
Haze_11955 Corylus avellana HOM05D000234 ORTHO05D000335 3.4e-08 64.7 304 25.7
Medtr5g042590 Medicago truncatula HOM05D000234 ORTHO05D000335 4.5e-08 64.3 291 25.8
TWI79G1549 Tripterygium wilfordii HOM05D000234 ORTHO05D000335 4.5e-08 64.3 289 26.0
Gohir.A05G305501 Gossypium hirsutum HOM05D000234 ORTHO05D000335 7.7e-08 63.5 289 27.0
Thecc.02G339200 Theobroma cacao HOM05D000234 ORTHO05D000335 7.7e-08 63.5 289 26.3
Gohir.D05G305500 Gossypium hirsutum HOM05D000234 ORTHO05D000335 1.3e-07 62.8 289 27.0
Gorai.009G325500 Gossypium raimondii HOM05D000234 ORTHO05D000335 1.3e-07 62.8 289 27.0
Manes.01G032300 Manihot esculenta HOM05D000234 ORTHO05D000335 1.3e-07 62.8 291 25.4
Cfa008926 Carpinus fangiana HOM05D000234 ORTHO05D000335 1.7e-07 62.4 301 25.6
Duzib251G0888 Durio zibethinus HOM05D000234 ORTHO05D000335 1.7e-07 62.4 289 26.3
Gorai.013G089400 Gossypium raimondii HOM05D000234 ORTHO05D000335 2.2e-07 62.0 291 25.1
AT1G69440 Arabidopsis thaliana HOM05D000234 ORTHO05D000335 2.9e-07 61.6 289 24.9
Gohir.A13G078200 Gossypium hirsutum HOM05D000234 ORTHO05D000335 2.9e-07 61.6 291 25.4
Psat2g126320 Pisum sativum HOM05D000234 ORTHO05D000335 2.9e-07 61.6 286 26.2
TPR.G19945 Trifolium pratense HOM05D000234 ORTHO05D000335 2.9e-07 61.6 288 25.3
Nn6g35123 Nelumbo nucifera HOM05D000234 ORTHO05D000335 1.4e-06 59.3 497 20.7
MD16G1067000 Malus domestica HOM05D000234 ORTHO05D000335 2.5e-06 58.5 304 26.3
Ciclev10030593m.g Citrus clementina HOM05D000234 ORTHO05D000335 3.2e-06 58.2 291 25.8
Ca_04879_v3 Cicer arietinum L. HOM05D000234 ORTHO05D000335 5.5e-06 57.4 286 25.2
MD13G1068200 Malus domestica HOM05D000234 ORTHO05D000335 7.2e-06 57.0 298 25.8
unitig_8.g3192 Utricularia gibba HOM05D000234 ORTHO05D000335 7.2e-06 57.0 288 24.7
Aqoxy1G01496 Aquilegia oxysepala HOM05D000234 ORTHO05D000335 9.4e-06 56.6 108 32.4
unitig_22.g6503 Utricularia gibba HOM05D000234 ORTHO05D000335 9.4e-06 56.6 286 24.5


User provided reference genes

Program Settings