Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31618 Sequoiadendron giganteum HOM05D000076 ORTHO05D386561 1.3e-48 196.4 125 100.0
SGA_v2.0_scaffold63G21740 Striga asiatica HOM05D000076 ORTHO05D006537 8.9e-10 67.4 58 56.9
PSO017G3552 Papaver somniferum HOM05D000076 ORTHO05D006537 3.4e-09 65.5 53 54.7
MBI09_g06385_MAGBIO Magnolia biondii HOM05D000076 ORTHO05D006537 5.8e-09 64.7 62 46.8
ATR0824G261 Amborella trichopoda HOM05D000076 ORTHO05D006537 1.3e-08 63.5 60 46.7
SGA_v2.0_scaffold87G27061 Striga asiatica HOM05D000076 ORTHO05D006537 1.3e-08 63.5 58 53.4
CSS0033390 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D006537 1.7e-08 63.2 63 54.0
Nn4g22563 Nelumbo nucifera HOM05D000076 ORTHO05D006537 1.7e-08 63.2 56 48.2
THA.LOC104805278 Tarenaya hassleriana HOM05D000076 ORTHO05D006537 2.2e-08 62.8 68 44.1
PSO339G4815 Papaver somniferum HOM05D000076 ORTHO05D006537 2.9e-08 62.4 53 52.8
PSO478G1179 Papaver somniferum HOM05D000076 ORTHO05D006537 2.9e-08 62.4 53 52.8
PSO478G4993 Papaver somniferum HOM05D000076 ORTHO05D006537 2.9e-08 62.4 53 52.8
TAR371G0062 Trochodendron aralioides HOM05D000076 ORTHO05D006537 2.9e-08 62.4 56 48.2
Haze_12269 Corylus avellana HOM05D003359 ORTHO05D006537 4.9e-08 61.6 65 46.2
Dinv14738 Davidia involucrata HOM05D000076 ORTHO05D006537 4.9e-08 61.6 63 49.2
Migut.E00214 Erythranthe guttata HOM05D000076 ORTHO05D006537 6.4e-08 61.2 58 51.7
THA.LOC104825668 Tarenaya hassleriana HOM05D000076 ORTHO05D006537 6.4e-08 61.2 68 41.2
Actinidia15107 Actinidia chinensis HOM05D000076 ORTHO05D006537 8.3e-08 60.8 65 43.1
Potri.008G185200 Populus trichocarpa HOM05D000076 ORTHO05D006537 1.4e-07 60.1 57 47.4
SalBow1G8493 Salvia bowleyana HOM05D000076 ORTHO05D006537 1.4e-07 60.1 54 53.7
Aqoxy3G01255 Aquilegia oxysepala HOM05D000076 ORTHO05D006537 1.9e-07 59.7 56 51.8
Dinv15210 Davidia involucrata HOM05D000076 ORTHO05D006537 2.4e-07 59.3 63 49.2
PGR119G0671 Punica granatum HOM05D000076 ORTHO05D006537 2.4e-07 59.3 57 49.1
QL03p056977 Quercus lobata HOM05D000076 ORTHO05D006537 2.4e-07 59.3 75 44.0
Sabra08G0140300 Salix brachista HOM05D003359 ORTHO05D006537 2.4e-07 59.3 63 46.0
AL5G15140 Arabidopsis lyrata HOM05D000076 ORTHO05D006537 4.1e-07 58.5 57 45.6
AT3G26370 Arabidopsis thaliana HOM05D000076 ORTHO05D006537 4.1e-07 58.5 57 45.6
Carub.0005s0429 Capsella rubella HOM05D000076 ORTHO05D006537 4.1e-07 58.5 57 45.6
Manes.12G021200 Manihot esculenta HOM05D000076 ORTHO05D006537 4.1e-07 58.5 57 49.1
Actinidia37445 Actinidia chinensis HOM05D000076 ORTHO05D006537 5.4e-07 58.2 63 47.6
CARHR147380 Cardamine hirsuta HOM05D000076 ORTHO05D006537 5.4e-07 58.2 57 45.6
Medtr3g086570 Medicago truncatula HOM05D000076 ORTHO05D006537 5.4e-07 58.2 42 59.5
TAR629G2896 Trochodendron aralioides HOM05D000076 ORTHO05D006537 7.1e-07 57.8 42 52.4
Potri.010G048500 Populus trichocarpa HOM05D000076 ORTHO05D006537 9.2e-07 57.4 63 46.0
Cc11_g15960 Coffea canephora HOM05D000076 ORTHO05D006537 1.2e-06 57.0 41 61.0
Hma1.2p1_0079F.1_g041100 Hydrangea macrophylla HOM05D000076 ORTHO05D006537 1.2e-06 57.0 41 61.0
SEGI_23169 Sequoiadendron giganteum HOM05D000076 ORTHO05D006537 1.2e-06 57.0 46 52.2
Ca_25136_v3 Cicer arietinum L. HOM05D000076 ORTHO05D006537 1.6e-06 56.6 57 45.6
MELO3C011938.2 Cucumis melo HOM05D000076 ORTHO05D006537 1.6e-06 56.6 56 48.2
Thhalv10003920m.g Eutrema salsugineum HOM05D000076 ORTHO05D006537 2.1e-06 56.2 68 38.2
Gohir.D12G149900 Gossypium hirsutum HOM05D000076 ORTHO05D006537 2.1e-06 56.2 71 42.3
Gorai.008G161400 Gossypium raimondii HOM05D000076 ORTHO05D006537 2.1e-06 56.2 71 42.3
Thecc.02G263200 Theobroma cacao HOM05D000076 ORTHO05D006537 2.1e-06 56.2 56 48.2
TWI18G0661 Tripterygium wilfordii HOM05D000076 ORTHO05D006537 2.1e-06 56.2 64 43.8
CiPaw.06G066500 Carya illinoinensis HOM05D000076 ORTHO05D006537 2.7e-06 55.8 65 43.1
ClCG05G025870 Citrullus lanatus HOM05D000076 ORTHO05D006537 2.7e-06 55.8 56 48.2
Os02g0158800 Oryza sativa ssp. japonica HOM05D000076 ORTHO05D006537 2.7e-06 55.8 44 52.3
C07p35430 Brassica napus HOM05D000076 ORTHO05D006537 3.5e-06 55.5 68 38.2
BolC7t44067H Brassica oleracea HOM05D000076 ORTHO05D006537 3.5e-06 55.5 68 38.2
Duzib251G0776 Durio zibethinus HOM05D000076 ORTHO05D006537 3.5e-06 55.5 56 46.4
Sabra10G0020500 Salix brachista HOM05D003359 ORTHO05D006537 3.5e-06 55.5 63 42.9
Aa31LG2G6140 Aethionema arabicum HOM05D003359 ORTHO05D006537 4.6e-06 55.1 42 52.4
Glyma.18G013400 Glycine max HOM05D000076 ORTHO05D006537 4.6e-06 55.1 42 52.4
Lsat_1_v5_gn_3_30300 Lactuca sativa HOM05D000076 ORTHO05D006537 4.6e-06 55.1 61 42.6
Sp2g15520 Schrenkiella parvula HOM05D000076 ORTHO05D006537 4.6e-06 55.1 126 34.1
Gohir.A12G145400 Gossypium hirsutum HOM05D000076 ORTHO05D006537 6.0e-06 54.7 60 45.0
Lj6A814G99 Lonicera japonica HOM05D000076 ORTHO05D006537 6.0e-06 54.7 61 44.3
COL.COLO4_23484 Corchorus olitorius HOM05D000076 ORTHO05D006537 7.8e-06 54.3 56 44.6
vmacro16178 Vaccinium macrocarpon HOM05D000076 ORTHO05D006537 7.8e-06 54.3 63 46.0


User provided reference genes

Program Settings