Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31611 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 7.4e-109 397.1 189 100.0
SEGI_24666 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 3.8e-97 358.2 207 86.5
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 7.8e-66 254.2 137 89.1
Cfa023003 Carpinus fangiana HOM05D001966 ORTHO05D011119 9.5e-64 247.3 124 94.4
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 8.0e-63 244.2 159 79.2
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.4e-59 233.4 137 83.2
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 2.1e-47 193.0 98 92.9
arahy.Tifrunner.gnm1.ann1.KT8FLV Arachis hypogaea HOM05D001966 ORTHO05D011119 5.2e-46 188.3 98 89.8
ScUNg0000270 Simmondsia chinensis HOM05D001966 ORTHO05D011119 6.4e-44 181.4 126 73.8
SEGI_13516 Sequoiadendron giganteum HOM05D004182 ORTHO05D007321 1.1e-43 180.6 85 100.0
arahy.Tifrunner.gnm1.ann1.2KV113 Arachis hypogaea HOM05D000580 ORTHO05D011119 1.9e-43 179.9 98 86.7
arahy.Tifrunner.gnm1.ann1.1DF8CR Arachis hypogaea HOM05D001966 ORTHO05D011119 4.6e-42 175.3 91 91.2
CDE02G3054 Ceratophyllum demersum HOM05D001966 ORTHO05D011119 5.1e-41 171.8 87 93.1
arahy.Tifrunner.gnm1.ann1.KXW2A6 Arachis hypogaea HOM05D001966 ORTHO05D011119 2.0e-37 159.8 86 89.5
Sc09g0006250 Simmondsia chinensis HOM05D002578 ORTHO05D005154 2.3e-33 146.4 124 65.3
Gohir.1Z049692 Gossypium hirsutum HOM05D001966 ORTHO05D011119 4.3e-32 142.1 72 93.1
Gohir.1Z050866 Gossypium hirsutum HOM05D001966 ORTHO05D011119 4.3e-32 142.1 72 93.1
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 1.6e-31 140.2 72 91.7
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 3.6e-31 139.0 76 90.8
Gohir.A01G119800 Gossypium hirsutum HOM05D001966 ORTHO05D011119 3.6e-31 139.0 72 91.7
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 4.8e-31 138.7 86 80.2
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 8.1e-31 137.9 245 38.4
Gohir.D02G156751 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.4e-30 137.1 75 88.0
Gohir.A10G178000 Gossypium hirsutum HOM05D001966 ORTHO05D011119 3.1e-30 136.0 72 88.9
Hma1.2p1_0051F.1_g029255 Hydrangea macrophylla HOM05D001966 ORTHO05D011119 6.9e-30 134.8 72 87.5
Gorai.005G175800 Gossypium raimondii HOM05D001966 ORTHO05D011119 9.0e-30 134.4 75 86.7
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 1.2e-29 134.0 69 88.4
Potri.011G074067 Populus trichocarpa HOM05D001966 ORTHO05D011119 1.5e-29 133.7 72 88.9
Gorai.007G237900 Gossypium raimondii HOM05D001966 ORTHO05D011119 2.6e-29 132.9 72 87.5
Phvul.001G037800 Phaseolus vulgaris HOM05D001966 ORTHO05D011119 1.9e-27 126.7 72 83.3
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 3.2e-27 125.9 127 57.5
BraSC143t45651Z Brassica rapa HOM05D004182 ORTHO05D007321 1.6e-26 123.6 73 82.2
Gohir.A05G366050 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.0e-25 120.9 70 81.4
Gohir.D05G230250 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.3e-25 120.6 72 77.8
arahy.Tifrunner.gnm1.ann1.MHEL4J Arachis hypogaea HOM05D001966 ORTHO05D011119 4.3e-24 115.5 72 83.3
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 4.3e-24 115.5 163 47.2
BcaNung07086 Brassica carinata HOM05D001966 ORTHO05D011119 3.7e-23 112.5 57 94.7
Glyma.11G218300 Glycine max HOM05D001966 ORTHO05D011119 3.7e-23 112.5 82 72.0
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 6.2e-23 111.7 59 91.5
arahy.Tifrunner.gnm1.ann1.FF8QKQ Arachis hypogaea HOM05D001966 ORTHO05D011119 1.4e-22 110.5 57 93.0
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 2.2e-20 103.2 73 72.6
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BolSC35t60712H Brassica oleracea HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BraSC103t45421Z Brassica rapa HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BraSC58t46465Z Brassica rapa HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 2.2e-20 103.2 73 72.6
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 2.9e-20 102.8 73 71.2
Manes.13G063850 Manihot esculenta HOM05D001966 ORTHO05D011119 3.8e-20 102.4 73 71.2
BraSC59t46543Z Brassica rapa HOM05D004182 ORTHO05D007321 3.2e-19 99.4 71 71.8
TPR.G40147 Trifolium pratense HOM05D003168 ORTHO05D011119 4.2e-19 99.0 76 64.5
Migut.B01248 Erythranthe guttata HOM05D001966 ORTHO05D011119 5.5e-19 98.6 69 75.4
Gohir.A04G110920 Gossypium hirsutum HOM05D001966 ORTHO05D011119 5.5e-19 98.6 72 68.1
Gohir.A04G110980 Gossypium hirsutum HOM05D001966 ORTHO05D011119 5.5e-19 98.6 72 68.1
Oeu012760.1 Olea europaea HOM05D001966 ORTHO05D010127 4.6e-18 95.5 62 75.8
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 1.0e-17 94.4 73 68.5
SEGI_06057 Sequoiadendron giganteum HOM05D033036 ORTHO05D036140 2.3e-17 93.2 44 100.0
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 1.5e-16 90.5 43 93.0
ECA246G3863 Erigeron canadensis HOM05D002697 ORTHO05D003087 4.3e-16 89.0 49 83.7
BolSC49t61151H Brassica oleracea HOM05D004182 ORTHO05D007321 7.4e-16 88.2 65 69.2
EL10As15g24133 Beta vulgaris HOM05D004182 ORTHO05D007321 3.7e-15 85.9 41 95.1
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 6.2e-15 85.1 67 67.2
arahy.Tifrunner.gnm1.ann1.0KS2YP Arachis hypogaea HOM05D004182 ORTHO05D007321 1.2e-13 80.9 66 63.6
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 1.5e-13 80.5 45 88.9
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.5e-13 80.5 40 90.0
Sc05g0009610 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.0e-12 77.8 42 90.5
VMungo1080G1108 Vigna mungo HOM05D004182 ORTHO05D007321 1.7e-12 77.0 44 84.1
Nitab4.5_0000289g0040 Nicotiana tabacum HOM05D001966 ORTHO05D011119 1.1e-11 74.3 47 70.2
VMungo0942G0003 Vigna mungo HOM05D004182 ORTHO05D007321 1.4e-11 73.9 67 58.2
Actinidia01802 Actinidia chinensis HOM05D024403 ORTHO05D007321 5.5e-11 72.0 74 48.6
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 2.7e-10 69.7 67 56.7
Sopen04g018020 Solanum pennellii HOM05D001966 ORTHO05D011119 6.1e-10 68.6 44 81.8
arahy.Tifrunner.gnm1.ann1.71HDHZ Arachis hypogaea HOM05D001966 ORTHO05D010127 2.5e-08 63.2 48 66.7
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 4.3e-08 62.4 35 77.1
arahy.Tifrunner.gnm1.ann1.CSY78X Arachis hypogaea HOM05D000216 ORTHO05D000634 7.4e-08 61.6 33 81.8
BolSC44t60815H Brassica oleracea HOM05D004182 ORTHO05D010127 1.3e-07 60.8 28 96.4
BraSC103t45434Z Brassica rapa HOM05D004182 ORTHO05D010127 1.3e-07 60.8 28 96.4
BraSC25t45903Z Brassica rapa HOM05D004182 ORTHO05D010127 1.3e-07 60.8 28 96.4
BraSC59t46507Z Brassica rapa HOM05D004182 ORTHO05D010127 1.3e-07 60.8 28 96.4
A08p09050 Brassica napus HOM05D001966 ORTHO05D010127 3.7e-07 59.3 29 93.1
Lj7C481G13 Lonicera japonica HOM05D000352 ORTHO05D000260 3.7e-07 59.3 41 68.3
BraSC59t46527Z Brassica rapa HOM05D004182 ORTHO05D010127 8.2e-07 58.2 28 92.9
Oeu058351.1 Olea europaea HOM05D004182 ORTHO05D034028 8.2e-07 58.2 34 82.4
Nitab4.5_0003550g0060 Nicotiana tabacum HOM05D001966 ORTHO05D011119 3.1e-06 56.2 23 91.3
Sc04g0003140 Simmondsia chinensis HOM05D004182 ORTHO05D010127 6.9e-06 55.1 38 71.1
BolSC29t60624H Brassica oleracea HOM05D004182 ORTHO05D007321 9.0e-06 54.7 55 54.5


User provided reference genes

Program Settings