Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 1.1e-243 846.3 436 100.0
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 1.7e-185 652.9 430 76.5
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 2.8e-183 645.6 434 76.0
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 1.4e-182 643.3 431 75.6
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 1.7e-180 636.3 429 75.3
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 1.7e-180 636.3 432 75.7
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 2.2e-180 636.0 410 78.0
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 3.7e-180 635.2 407 79.4
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 1.9e-179 632.9 436 73.9
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.9e-179 632.9 430 76.0
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.9e-179 632.9 430 76.0
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 1.9e-179 632.9 424 77.1
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 4.1e-179 631.7 431 74.0
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 4.1e-179 631.7 442 72.9
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 5.4e-179 631.3 436 74.5
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 5.4e-179 631.3 431 76.1
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 9.2e-179 630.6 430 74.9
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 9.2e-179 630.6 393 81.7
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 4.6e-178 628.2 422 76.5
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 6.0e-178 627.9 427 74.9
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 6.0e-178 627.9 410 77.6
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 7.8e-178 627.5 393 80.9
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 1.0e-177 627.1 420 76.4
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 1.7e-177 626.3 404 78.0
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 1.7e-177 626.3 422 76.5
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.7e-177 626.3 427 74.9
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 2.3e-177 625.9 430 74.7
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 2.3e-177 625.9 407 77.6
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 3.0e-177 625.5 437 73.2
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 3.0e-177 625.5 398 78.9
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 5.1e-177 624.8 429 74.6
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 5.1e-177 624.8 379 82.1
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 5.1e-177 624.8 410 76.6
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 6.6e-177 624.4 396 78.0
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 6.6e-177 624.4 436 72.9
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 8.6e-177 624.0 397 78.8
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 8.6e-177 624.0 428 74.3
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 1.1e-176 623.6 401 77.8
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 1.1e-176 623.6 397 78.3
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 1.1e-176 623.6 397 78.3
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 3.3e-176 622.1 414 76.3
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 4.3e-176 621.7 439 72.0
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 4.3e-176 621.7 394 80.5
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 5.6e-176 621.3 425 75.3
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 7.3e-176 620.9 400 78.0
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 7.3e-176 620.9 386 80.6
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 1.2e-175 620.2 425 75.3
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 1.2e-175 620.2 424 74.8
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 1.2e-175 620.2 424 74.5
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 1.6e-175 619.8 384 81.5
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 1.6e-175 619.8 432 74.5
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.8e-175 619.0 426 74.6
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 2.8e-175 619.0 426 73.9
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 3.6e-175 618.6 426 74.2
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 4.7e-175 618.2 428 74.3
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 4.7e-175 618.2 438 72.4
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 4.7e-175 618.2 424 74.8
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 4.7e-175 618.2 426 73.7
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 6.2e-175 617.8 426 75.4
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 6.2e-175 617.8 449 72.6
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 6.2e-175 617.8 435 73.8
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 6.2e-175 617.8 442 72.2
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 8.1e-175 617.5 397 78.1
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 8.1e-175 617.5 403 77.9
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 1.4e-174 616.7 439 72.7
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 1.4e-174 616.7 433 73.7
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 1.4e-174 616.7 433 73.7
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 1.4e-174 616.7 422 74.2
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.3e-174 615.9 426 73.5
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 2.3e-174 615.9 426 73.5
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 3.1e-174 615.5 432 74.3
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 4.0e-174 615.1 429 73.7
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 6.8e-174 614.4 430 73.0
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 8.9e-174 614.0 435 73.3
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 8.9e-174 614.0 430 73.0
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 8.9e-174 614.0 428 74.1
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 1.5e-173 613.2 390 78.5
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 1.5e-173 613.2 431 74.2
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 1.5e-173 613.2 407 76.7
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 1.5e-173 613.2 408 75.7
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 2.0e-173 612.8 435 72.9
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 2.6e-173 612.5 437 73.0
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 2.6e-173 612.5 437 73.0
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 2.6e-173 612.5 437 73.0
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 3.4e-173 612.1 430 72.8
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 5.8e-173 611.3 436 73.2
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 7.5e-173 610.9 428 74.1
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 9.9e-173 610.5 429 73.9
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 9.9e-173 610.5 426 74.4
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 9.9e-173 610.5 436 72.5
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 9.9e-173 610.5 436 72.5
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 1.3e-172 610.1 426 74.4
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 1.3e-172 610.1 436 72.9
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 1.7e-172 609.8 426 74.4
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 2.9e-172 609.0 438 72.8
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 3.7e-172 608.6 432 72.7
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 6.4e-172 607.8 473 68.9
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 1.4e-171 606.7 394 76.9
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 3.2e-171 605.5 395 77.0
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 3.2e-171 605.5 438 72.1
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 4.1e-171 605.1 428 73.6
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 4.1e-171 605.1 428 72.7
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.1e-171 605.1 433 72.5
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 5.4e-171 604.7 426 72.1
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 7.1e-171 604.4 429 73.2
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 7.1e-171 604.4 433 72.3
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 1.6e-170 603.2 441 70.1
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.6e-170 603.2 427 73.1
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 2.1e-170 602.8 433 72.3
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 1.3e-169 600.1 436 70.4
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 1.7e-169 599.7 439 70.4
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 1.7e-169 599.7 436 72.5
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 2.3e-169 599.4 397 76.3
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 2.3e-169 599.4 422 72.3
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.3e-169 599.4 429 71.6
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 3.9e-169 598.6 424 73.8
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 1.2e-167 593.6 433 71.1
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 1.6e-167 593.2 394 76.1
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 6.2e-167 591.3 409 72.9
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 1.8e-166 589.7 518 62.0
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 3.4e-165 585.5 391 75.7
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 4.4e-165 585.1 427 71.4
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.9e-164 582.4 472 66.3
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 1.1e-163 580.5 395 75.2
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 1.1e-163 580.5 521 60.7
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 1.3e-161 573.5 385 74.5
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 6.6e-161 571.2 433 69.5
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 1.3e-159 567.0 430 69.1
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 1.6e-159 566.6 398 72.4
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 9.0e-158 560.8 423 67.4
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.2e-156 556.2 426 68.8
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 1.4e-155 553.5 383 70.8
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 6.2e-151 538.1 352 76.1
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 2.0e-149 533.1 362 75.1
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 1.7e-148 530.0 350 77.4
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 2.7e-146 522.7 385 69.6
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 4.6e-146 521.9 353 75.6
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 6.7e-145 518.1 376 70.5
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 8.7e-145 517.7 366 73.0
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 1.1e-144 517.3 390 70.3
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 1.9e-144 516.5 344 76.2
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 9.6e-144 514.2 322 79.2
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 4.5e-141 505.4 349 75.1
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 1.3e-140 503.8 434 62.9
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 1.1e-139 500.7 421 64.1
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 3.2e-139 499.2 367 68.7
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 1.1e-128 464.2 344 70.3
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 4.5e-125 452.2 330 69.7
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 3.6e-122 442.6 266 79.7
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 4.3e-120 435.6 258 82.2
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 2.6e-117 426.4 385 61.6
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 1.8e-105 387.1 257 77.4
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 7.7e-93 345.1 230 77.4
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 1.0e-84 318.2 367 48.2
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.2e-82 311.2 237 66.2
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 8.0e-82 308.5 229 70.3
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 1.2e-80 304.7 190 80.0
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 4.4e-80 302.8 355 50.1
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.9e-75 287.3 183 78.7
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 2.8e-66 256.9 152 80.9
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.3e-57 227.3 200 59.5
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.3e-57 227.3 200 59.5
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 2.6e-56 223.8 221 60.2
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 2.4e-54 217.2 146 74.0
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.1e-49 201.8 244 52.9
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 1.2e-40 171.8 99 86.9
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 2.3e-36 157.5 220 49.1
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 3.0e-36 157.1 139 60.4
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 1.8e-25 121.3 82 76.8
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 1.6e-21 108.2 72 81.9
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.3e-19 100.1 298 31.9
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 4.3e-19 100.1 89 64.0
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 1.6e-18 98.2 63 79.4
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 1.6e-18 98.2 63 79.4
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.9e-16 89.7 90 52.2
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 6.5e-15 86.3 75 62.7
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 2.1e-13 81.3 49 79.6
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 3.5e-13 80.5 46 80.4
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 1.3e-10 72.0 47 76.6
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 1.1e-09 68.9 43 76.7
Rhsim05G0028600 Rhododendron simsii HOM05D000745 ORTHO05D000641 3.8e-07 60.5 28 89.3
Actinidia38274 Actinidia chinensis HOM05D003701 ORTHO05D012924 6.5e-07 59.7 45 60.0


User provided reference genes

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