Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31479 Sequoiadendron giganteum HOM05D009476 ORTHO05D385101 1.3e-251 874.0 554 100.0
SEGI_05527 Sequoiadendron giganteum HOM05D000506 ORTHO05D000369 7.3e-24 117.5 90 67.8
SEGI_03032 Sequoiadendron giganteum HOM05D009476 ORTHO05D014262 9.0e-22 110.5 122 50.8
SEGI_24204 Sequoiadendron giganteum HOM05D009476 ORTHO05D384957 2.6e-21 109.0 137 48.2
SEGI_10888 Sequoiadendron giganteum HOM05D009476 ORTHO05D014262 4.9e-20 104.8 137 43.8
SEGI_16588 Sequoiadendron giganteum HOM05D009476 ORTHO05D014262 1.3e-17 96.7 89 55.1
SEGI_06553 Sequoiadendron giganteum HOM05D009476 ORTHO05D014262 3.0e-17 95.5 137 43.1
SEGI_34901 Sequoiadendron giganteum HOM05D005092 ORTHO05D006073 1.5e-16 93.2 129 41.9
SEGI_10417 Sequoiadendron giganteum HOM05D000076 ORTHO05D001377 2.5e-16 92.4 107 52.3
SEGI_02753 Sequoiadendron giganteum HOM05D009476 ORTHO05D014262 9.6e-16 90.5 136 40.4
SEGI_21305 Sequoiadendron giganteum HOM05D009476 ORTHO05D386182 4.0e-14 85.1 95 50.5
SEGI_03326 Sequoiadendron giganteum HOM05D009476 ORTHO05D014262 5.8e-13 81.3 94 47.9
SEGI_25010 Sequoiadendron giganteum HOM05D009476 ORTHO05D006441 2.5e-11 75.9 101 42.6
SEGI_07133 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 6.0e-10 71.2 96 45.8
Sopen05g029730 Solanum pennellii HOM05D007291 ORTHO05D009038 3.0e-09 68.9 178 27.5
SEGI_05340 Sequoiadendron giganteum HOM05D009476 ORTHO05D014262 3.9e-09 68.6 113 35.4
SEGI_12772 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 3.9e-09 68.6 116 41.4
SEGI_39656 Sequoiadendron giganteum HOM05D009476 ORTHO05D014262 3.9e-09 68.6 98 39.8
PGSC0003DMG401014601 Solanum tuberosum HOM05D007291 ORTHO05D009038 5.1e-09 68.2 167 27.5
MSTRG.10708 Avicennia marina HOM05D007291 ORTHO05D009038 6.7e-09 67.8 177 26.0
Solyc05g051340.3 Solanum lycopersicum HOM05D007291 ORTHO05D009038 6.7e-09 67.8 178 27.0
Haze_20537 Corylus avellana HOM05D002890 ORTHO05D009847 8.7e-09 67.4 204 27.9
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 1.1e-08 67.0 186 25.3
Prupe.4G237400 Prunus persica HOM05D007291 ORTHO05D009038 1.1e-08 67.0 169 27.8
Cc07_g13560 Coffea canephora HOM05D007291 ORTHO05D009038 1.5e-08 66.6 198 25.8
SEGI_19560 Sequoiadendron giganteum HOM05D000564 ORTHO05D002780 1.9e-08 66.2 95 46.3
SEGI_00713 Sequoiadendron giganteum HOM05D009476 ORTHO05D030601 2.5e-08 65.9 83 44.6
ClCG03G004730 Citrullus lanatus HOM05D002890 ORTHO05D009847 3.3e-08 65.5 208 26.4
BcaC03g14744 Brassica carinata HOM05D007291 ORTHO05D009038 7.4e-08 64.3 176 25.0
C02p21950 Brassica napus HOM05D007291 ORTHO05D009038 7.4e-08 64.3 176 25.0
BolC2t08326H Brassica oleracea HOM05D007291 ORTHO05D009038 7.4e-08 64.3 176 25.0
Duzib268G1497 Durio zibethinus HOM05D007291 ORTHO05D009038 9.6e-08 63.9 179 26.8
DCAR_003433 Daucus carota HOM05D007291 ORTHO05D009038 1.3e-07 63.5 175 26.3
Migut.H01009 Erythranthe guttata HOM05D007291 ORTHO05D009038 1.3e-07 63.5 195 23.6
SEGI_20893 Sequoiadendron giganteum HOM05D000081 ORTHO05D000036 1.3e-07 63.5 68 52.9
Rhsim08G0018600 Rhododendron simsii HOM05D001542 ORTHO05D001416 1.6e-07 63.2 177 23.7
CSS0001323 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D009847 2.1e-07 62.8 181 26.5
CSS0009024 Camellia sinensis var. sinensis HOM05D007956 ORTHO05D009038 2.1e-07 62.8 170 24.1
SEGI_16060 Sequoiadendron giganteum HOM05D000269 ORTHO05D385533 2.1e-07 62.8 112 33.0
Aqoxy3G02430 Aquilegia oxysepala HOM05D007291 ORTHO05D009038 2.8e-07 62.4 178 23.0
CiPaw.01G118600 Carya illinoinensis HOM05D007291 ORTHO05D009038 3.7e-07 62.0 177 26.6
Oeu032258.1 Olea europaea HOM05D007291 ORTHO05D009038 3.7e-07 62.0 195 24.6
SEGI_33951 Sequoiadendron giganteum HOM05D000506 ORTHO05D000369 3.7e-07 62.0 52 59.6
AT1G66345 Arabidopsis thaliana HOM05D007291 ORTHO05D009038 4.8e-07 61.6 172 25.6
A02p13610 Brassica napus HOM05D007291 ORTHO05D009038 4.8e-07 61.6 176 25.0
BraA02t06420Z Brassica rapa HOM05D007291 ORTHO05D009038 4.8e-07 61.6 176 25.0
COL.COLO4_31777 Corchorus olitorius HOM05D002890 ORTHO05D009847 4.8e-07 61.6 253 26.5
Potri.004G090800 Populus trichocarpa HOM05D007291 ORTHO05D009038 4.8e-07 61.6 176 23.9
CAN.G1181.19 Capsicum annuum HOM05D007291 ORTHO05D009038 6.3e-07 61.2 179 27.4
CARHR058230 Cardamine hirsuta HOM05D007291 ORTHO05D009038 6.3e-07 61.2 180 26.7
MBI05_g05281_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D009847 6.3e-07 61.2 170 28.2
SEGI_04297 Sequoiadendron giganteum HOM05D007212 ORTHO05D009094 6.3e-07 61.2 227 29.1
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 8.2e-07 60.8 167 29.3
Sabra04G0061000 Salix brachista HOM05D007291 ORTHO05D009038 8.2e-07 60.8 176 22.7
SEGI_26268 Sequoiadendron giganteum HOM05D002861 ORTHO05D003104 8.2e-07 60.8 90 35.6
arahy.Tifrunner.gnm1.ann1.HW3SC4 Arachis hypogaea HOM05D007291 ORTHO05D009038 1.1e-06 60.5 169 23.7
Carub.0002s1237 Capsella rubella HOM05D007291 ORTHO05D009038 1.1e-06 60.5 176 26.1
SGA_v2.0_scaffold159G37611 Striga asiatica HOM05D007291 ORTHO05D009038 1.1e-06 60.5 186 26.3
TAR624G0355 Trochodendron aralioides HOM05D002890 ORTHO05D009847 1.1e-06 60.5 168 25.0
HanXRQChr14g0444491 Helianthus annuus HOM05D007291 ORTHO05D009038 1.4e-06 60.1 156 25.0
Hma1.2p1_0524F.1_g172380 Hydrangea macrophylla HOM05D007291 ORTHO05D009038 1.4e-06 60.1 173 25.4
Cpa.g.sc116.47 Carica papaya HOM05D007291 ORTHO05D009038 1.8e-06 59.7 180 26.7
Sed0010805 Sechium edule HOM05D002890 ORTHO05D009847 1.8e-06 59.7 171 26.9
MELO3C035731.2 Cucumis melo HOM05D002890 ORTHO05D009847 2.4e-06 59.3 208 24.0
Hma1.2p1_1840F.1_g304950 Hydrangea macrophylla HOM05D007291 ORTHO05D009038 2.4e-06 59.3 173 24.9
Duzib235G0255 Durio zibethinus HOM05D002890 ORTHO05D009847 3.1e-06 58.9 168 28.0
Thhalv10018418m.g Eutrema salsugineum HOM05D007291 ORTHO05D009038 3.1e-06 58.9 179 26.8
Gohir.D05G340000 Gossypium hirsutum HOM05D007291 ORTHO05D009038 3.1e-06 58.9 179 25.7
Cfa009057 Carpinus fangiana HOM05D007063 ORTHO05D008822 4.1e-06 58.5 177 26.0
SalBow1G1723 Salvia bowleyana HOM05D007291 ORTHO05D009038 4.1e-06 58.5 195 24.1
SEGI_38600 Sequoiadendron giganteum HOM05D000339 ORTHO05D000212 4.1e-06 58.5 39 71.8
ATR0618G019 Amborella trichopoda HOM05D006888 ORTHO05D008371 6.9e-06 57.8 177 24.9
QL05p073136 Quercus lobata HOM05D002890 ORTHO05D009847 6.9e-06 57.8 170 28.2
Gorai.009G365100 Gossypium raimondii HOM05D007291 ORTHO05D009038 9.0e-06 57.4 176 26.7
TWI74G1032 Tripterygium wilfordii HOM05D007291 ORTHO05D009038 9.0e-06 57.4 177 23.7


User provided reference genes

Program Settings