Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31467 Sequoiadendron giganteum HOM05D003311 ORTHO05D003707 1.8e-277 959.1 696 100.0
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 2.5e-16 91.7 68 61.8
CSS0033713 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 9.7e-13 79.7 163 35.0
Nn5g29097 Nelumbo nucifera HOM05D003311 ORTHO05D003707 1.3e-12 79.3 155 36.1
Nn1g05901 Nelumbo nucifera HOM05D003311 ORTHO05D003707 2.2e-12 78.6 166 36.7
Potri.004G168600 Populus trichocarpa HOM05D003311 ORTHO05D003707 4.8e-12 77.4 166 36.7
Sabra04G0113000 Salix brachista HOM05D003311 ORTHO05D003707 1.4e-11 75.9 167 34.7
Phvul.011G026700 Phaseolus vulgaris HOM05D003311 ORTHO05D003707 2.4e-11 75.1 186 32.3
TWI75G0647 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 3.1e-11 74.7 175 36.0
Potri.009G129900 Populus trichocarpa HOM05D003311 ORTHO05D003707 5.3e-11 73.9 163 36.8
Ca_19004_v3 Cicer arietinum L. HOM05D003311 ORTHO05D003707 1.2e-10 72.8 174 33.9
Sabra09G0099300 Salix brachista HOM05D003311 ORTHO05D003707 2.0e-10 72.0 161 35.4
PSO170G2430 Papaver somniferum HOM05D003311 ORTHO05D003707 2.6e-10 71.6 189 37.0
DCAR_022953 Daucus carota HOM05D003311 ORTHO05D003707 4.5e-10 70.9 167 33.5
TWI79G0740 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 4.5e-10 70.9 173 34.7
PSO700G0002 Papaver somniferum HOM05D003311 ORTHO05D003707 1.3e-09 69.3 189 36.5
MELO3C013376.2 Cucumis melo HOM05D003311 ORTHO05D003707 2.2e-09 68.6 179 32.4
COL.COLO4_17258 Corchorus olitorius HOM05D003311 ORTHO05D003707 2.9e-09 68.2 166 34.3
Lj9A389T67 Lonicera japonica HOM05D003311 ORTHO05D003707 2.9e-09 68.2 166 34.3
Prupe.8G160900 Prunus persica HOM05D003311 ORTHO05D003707 5.0e-09 67.4 180 32.2
DCAR_003701 Daucus carota HOM05D003311 ORTHO05D003707 8.5e-09 66.6 163 30.7
Lalb_Chr03g0024711 Lupinus albus HOM05D003311 ORTHO05D003707 1.9e-08 65.5 181 31.5
Hma1.2p1_4000F.1_g338120 Hydrangea macrophylla HOM05D003311 ORTHO05D003707 2.5e-08 65.1 140 34.3
QL11p047628 Quercus lobata HOM05D003311 ORTHO05D003707 3.2e-08 64.7 163 34.4
PGSC0003DMG400001243 Solanum tuberosum HOM05D003311 ORTHO05D003707 3.2e-08 64.7 151 33.1
Aqoxy5G01798 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 4.2e-08 64.3 199 31.2
CSS0038966 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 4.2e-08 64.3 157 32.5
Lalb_Chr01g0001331 Lupinus albus HOM05D003311 ORTHO05D003707 7.2e-08 63.5 164 32.9
Rhsim05G0063000 Rhododendron simsii HOM05D003311 ORTHO05D003707 7.2e-08 63.5 157 30.6
Hund00043 Selenicereus undatus HOM05D003311 ORTHO05D003707 7.2e-08 63.5 216 33.3
CsaV3_7G000820 Cucumis sativus L. HOM05D000144 ORTHO05D003707 1.6e-07 62.4 180 30.6
Medtr4g075333 Medicago truncatula HOM05D003311 ORTHO05D003707 2.1e-07 62.0 159 28.9
MD10G1118600 Malus domestica HOM05D003311 ORTHO05D003707 2.7e-07 61.6 172 32.6
Os10g0149800 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 2.7e-07 61.6 158 32.9
Sed0022693 Sechium edule HOM05D003311 ORTHO05D003707 2.7e-07 61.6 161 32.3
Actinidia20487 Actinidia chinensis HOM05D000144 ORTHO05D003707 3.6e-07 61.2 182 31.9
Duzib132G0547 Durio zibethinus HOM05D003311 ORTHO05D003707 3.6e-07 61.2 176 32.4
MD05G1116400 Malus domestica HOM05D003311 ORTHO05D003707 6.1e-07 60.5 161 30.4
Manes.11G090200 Manihot esculenta HOM05D003311 ORTHO05D003707 1.0e-06 59.7 157 31.8
Eucgr.I01377 Eucalyptus grandis HOM05D003311 ORTHO05D003707 1.8e-06 58.9 170 33.5
TPR.G17164 Trifolium pratense HOM05D003311 ORTHO05D003707 6.7e-06 57.0 178 29.2
Lj3g0005308 Lotus japonicus HOM05D003311 ORTHO05D003707 8.8e-06 56.6 161 30.4
Os10g0148100 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 8.8e-06 56.6 169 30.2


User provided reference genes

Program Settings