Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31465 Sequoiadendron giganteum HOM05D006482 ORTHO05D008149 9.0e-54 213.4 112 100.0
TAR374G1512 Trochodendron aralioides HOM05D006482 ORTHO05D008149 2.7e-13 79.0 61 65.6
Dinv18742 Davidia involucrata HOM05D006482 ORTHO05D008149 4.5e-13 78.2 61 63.9
CSS0017170 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 5.9e-13 77.8 65 63.1
Nn3g18841 Nelumbo nucifera HOM05D006482 ORTHO05D008149 1.0e-12 77.0 61 63.9
Nitab4.5_0002720g0020 Nicotiana tabacum HOM05D006482 ORTHO05D008149 1.0e-12 77.0 61 62.3
Actinidia27284 Actinidia chinensis HOM05D000567 ORTHO05D000767 1.7e-12 76.3 61 63.9
Migut.E00300 Erythranthe guttata HOM05D006482 ORTHO05D008149 2.2e-12 75.9 73 53.4
QL05p036199 Quercus lobata HOM05D006482 ORTHO05D008149 2.9e-12 75.5 65 61.5
Atru.chr12.2369 Acer truncatum HOM05D006482 ORTHO05D008149 3.8e-12 75.1 65 63.1
Nitab4.5_0008141g0050 Nicotiana tabacum HOM05D006482 ORTHO05D008149 5.0e-12 74.7 73 56.2
CANSAT21G0227 Cannabis sativa HOM05D006482 ORTHO05D008149 6.5e-12 74.3 62 62.9
Ciclev10023193m.g Citrus clementina HOM05D006482 ORTHO05D008149 6.5e-12 74.3 65 60.0
PSO063G1999 Papaver somniferum HOM05D006482 ORTHO05D008149 6.5e-12 74.3 61 57.4
TAR629G1047 Trochodendron aralioides HOM05D006482 ORTHO05D008149 6.5e-12 74.3 59 64.4
unitig_699.g19497 Utricularia gibba HOM05D006482 ORTHO05D008149 6.5e-12 74.3 60 63.3
Rhsim03G0214200 Rhododendron simsii HOM05D006482 ORTHO05D008149 8.5e-12 73.9 61 60.7
TPR.G14847 Trifolium pratense HOM05D006482 ORTHO05D008149 8.5e-12 73.9 65 60.0
Ah.13g070630 Amaranthus hybridus HOM05D006482 ORTHO05D008149 1.5e-11 73.2 73 53.4
Glyma.04G230700 Glycine max HOM05D006482 ORTHO05D008149 1.5e-11 73.2 67 56.7
MD01G1227400 Malus domestica HOM05D006482 ORTHO05D008149 1.5e-11 73.2 60 63.3
Hund21041 Selenicereus undatus HOM05D006482 ORTHO05D008149 1.5e-11 73.2 70 58.6
Medtr3g092270 Medicago truncatula HOM05D006482 ORTHO05D008149 1.9e-11 72.8 65 60.0
CiPaw.05G203100 Carya illinoinensis HOM05D006482 ORTHO05D008149 2.5e-11 72.4 65 58.5
Psat5g073480 Pisum sativum HOM05D006482 ORTHO05D008149 3.2e-11 72.0 69 56.5
Prupe.2G317400 Prunus persica HOM05D006482 ORTHO05D008149 3.2e-11 72.0 65 58.5
CDE09G1364 Ceratophyllum demersum HOM05D001294 ORTHO05D001178 5.5e-11 71.2 74 50.0
Gohir.A08G103900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 5.5e-11 71.2 65 58.5
EL10Ac3g05199 Beta vulgaris HOM05D006482 ORTHO05D008149 7.2e-11 70.9 61 60.7
HanXRQChr07g0192381 Helianthus annuus HOM05D006482 ORTHO05D008149 7.2e-11 70.9 62 58.1
Lj1g0026941 Lotus japonicus HOM05D006482 ORTHO05D008149 7.2e-11 70.9 67 56.7
TWI14G0741 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 7.2e-11 70.9 76 53.9
vmacro06428 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 7.2e-11 70.9 60 60.0
Lalb_Chr11g0067291 Lupinus albus HOM05D006482 ORTHO05D008149 9.4e-11 70.5 67 55.2
Oeu010737.1 Olea europaea HOM05D006482 ORTHO05D008149 9.4e-11 70.5 73 52.1
Phvul.009G047100 Phaseolus vulgaris HOM05D006482 ORTHO05D008149 9.4e-11 70.5 67 55.2
RcHm_v2.0_Chr1g0382671 Rosa chinensis HOM05D006482 ORTHO05D008149 9.4e-11 70.5 61 60.7
CSS0001288 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 1.2e-10 70.1 61 60.7
Lalb_Chr23g0271851 Lupinus albus HOM05D006482 ORTHO05D008149 1.2e-10 70.1 65 58.5
Manes.01G041500 Manihot esculenta HOM05D006482 ORTHO05D008149 1.2e-10 70.1 69 59.4
Potri.015G006500 Populus trichocarpa HOM05D006482 ORTHO05D008149 1.2e-10 70.1 69 56.5
Gohir.D08G115300 Gossypium hirsutum HOM05D006482 ORTHO05D008149 1.6e-10 69.7 65 56.9
Gorai.004G124200 Gossypium raimondii HOM05D006482 ORTHO05D008149 1.6e-10 69.7 65 56.9
Peaxi162Scf00074g00224 Petunia axillaris HOM05D006482 ORTHO05D008149 1.6e-10 69.7 67 56.7
PGSC0003DMG400012236 Solanum tuberosum HOM05D006482 ORTHO05D008149 1.6e-10 69.7 73 52.1
Thecc.03G206900 Theobroma cacao HOM05D006482 ORTHO05D008149 1.6e-10 69.7 65 58.5
AT5G53650 Arabidopsis thaliana HOM05D006482 ORTHO05D008149 2.7e-10 68.9 62 59.7
FvH4_7g32700 Fragaria vesca HOM05D006482 ORTHO05D008149 2.7e-10 68.9 75 48.0
FAN01G3112 Fragaria x ananassa HOM05D006482 ORTHO05D008149 2.7e-10 68.9 61 57.4
FAN03G2872 Fragaria x ananassa HOM05D006482 ORTHO05D008149 2.7e-10 68.9 61 57.4
Sopen08g031390 Solanum pennellii HOM05D006482 ORTHO05D008149 2.7e-10 68.9 73 52.1
COL.COLO4_14353 Corchorus olitorius HOM05D006482 ORTHO05D008149 3.6e-10 68.6 73 53.4
Duzib205G0332 Durio zibethinus HOM05D006482 ORTHO05D008149 3.6e-10 68.6 65 56.9
ECA233G2670 Erigeron canadensis HOM05D006482 ORTHO05D008149 3.6e-10 68.6 61 57.4
Eucgr.K00422 Eucalyptus grandis HOM05D006482 ORTHO05D008149 3.6e-10 68.6 69 55.1
Glyma.04G154600 Glycine max HOM05D006482 ORTHO05D008149 3.6e-10 68.6 62 59.7
Gorai.008G265700 Gossypium raimondii HOM05D006482 ORTHO05D008149 3.6e-10 68.6 65 56.9
Lsat_1_v5_gn_6_10060 Lactuca sativa HOM05D006482 ORTHO05D008149 3.6e-10 68.6 61 57.4
Dinv29224 Davidia involucrata HOM05D006482 ORTHO05D008149 4.7e-10 68.2 68 52.9
Solyc08g083200.3 Solanum lycopersicum HOM05D006482 ORTHO05D008149 4.7e-10 68.2 73 50.7
Potri.012G022900 Populus trichocarpa HOM05D006482 ORTHO05D008149 8.0e-10 67.4 62 58.1
PGR142G0199 Punica granatum HOM05D006482 ORTHO05D008149 8.0e-10 67.4 73 54.8
Aa31LG3G9780 Aethionema arabicum HOM05D006482 ORTHO05D008149 1.0e-09 67.0 64 56.2
AL8G28600 Arabidopsis lyrata HOM05D006482 ORTHO05D008149 1.4e-09 66.6 61 59.0
CSS0049934 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 1.4e-09 66.6 61 59.0
Carub.0008s1398 Capsella rubella HOM05D006482 ORTHO05D008149 1.4e-09 66.6 62 58.1
Thhalv10015198m.g Eutrema salsugineum HOM05D006482 ORTHO05D008149 1.4e-09 66.6 62 58.1
GSVIVG01038627001 Vitis vinifera HOM05D006482 ORTHO05D008149 1.4e-09 66.6 73 53.4
Sp6g15770 Schrenkiella parvula HOM05D006482 ORTHO05D008149 1.8e-09 66.2 62 58.1
A03p15030 Brassica napus HOM05D006482 ORTHO05D008149 2.3e-09 65.9 61 59.0
C03p17520 Brassica napus HOM05D006482 ORTHO05D008149 2.3e-09 65.9 64 56.2
BolC3t14165H Brassica oleracea HOM05D006482 ORTHO05D008149 2.3e-09 65.9 64 56.2
BraA03t10797Z Brassica rapa HOM05D006482 ORTHO05D008149 2.3e-09 65.9 61 59.0
CARHR266810 Cardamine hirsuta HOM05D006482 ORTHO05D008149 2.3e-09 65.9 62 58.1
Sabra15G0004500 Salix brachista HOM05D006482 ORTHO05D008149 2.3e-09 65.9 69 52.2
Cc08_g16820 Coffea canephora HOM05D006482 ORTHO05D008149 3.0e-09 65.5 61 55.7
Sed0025475 Sechium edule HOM05D006482 ORTHO05D008149 3.0e-09 65.5 71 53.5
arahy.Tifrunner.gnm1.ann1.ZIU4UI Arachis hypogaea HOM05D006482 ORTHO05D008149 4.0e-09 65.1 71 50.7
ClCG01G000130 Citrullus lanatus HOM05D006482 ORTHO05D008149 5.2e-09 64.7 69 52.2
Sc19g0000660 Simmondsia chinensis HOM05D006482 ORTHO05D008149 5.2e-09 64.7 61 60.7
TWI39G0373 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 5.2e-09 64.7 65 53.8
BcaB01g04252 Brassica carinata HOM05D006482 ORTHO05D008149 6.8e-09 64.3 61 57.4
SalBow3G2365 Salvia bowleyana HOM05D006482 ORTHO05D008149 6.8e-09 64.3 73 46.6
Hund09702 Selenicereus undatus HOM05D006482 ORTHO05D008149 8.8e-09 63.9 60 55.0
BcaC01g06263 Brassica carinata HOM05D006482 ORTHO05D008149 1.2e-08 63.5 61 57.4
AUR62035606 Chenopodium quinoa HOM05D006482 ORTHO05D008149 1.2e-08 63.5 97 42.3
MELO3C005924.2 Cucumis melo HOM05D006482 ORTHO05D008149 1.2e-08 63.5 69 53.6
arahy.Tifrunner.gnm1.ann1.CVH3M3 Arachis hypogaea HOM05D006482 ORTHO05D008149 1.5e-08 63.2 71 49.3
BcaB05g22064 Brassica carinata HOM05D006482 ORTHO05D008149 1.5e-08 63.2 61 57.4
A02p10930 Brassica napus HOM05D006482 ORTHO05D008149 2.0e-08 62.8 73 50.7
CsaV3_5G000030 Cucumis sativus L. HOM05D006482 ORTHO05D008149 2.6e-08 62.4 73 53.4
Glyma.06G134500 Glycine max HOM05D006482 ORTHO05D008149 5.7e-08 61.2 67 53.7
BraA02t06158Z Brassica rapa HOM05D006482 ORTHO05D008149 7.5e-08 60.8 73 49.3
Gohir.A12G246900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 7.5e-08 60.8 65 50.8
CiPaw.06G042200 Carya illinoinensis HOM05D006482 ORTHO05D008149 9.8e-08 60.5 65 47.7
THA.LOC109117152 Tarenaya hassleriana HOM05D006482 ORTHO05D008149 1.3e-07 60.1 60 53.3
Duzib068G1219 Durio zibethinus HOM05D006482 ORTHO05D008149 1.7e-07 59.7 84 45.2
Hma1.2p1_0456F.1_g156710 Hydrangea macrophylla HOM05D006482 ORTHO05D008149 1.7e-07 59.7 73 47.9
MD07G1297700 Malus domestica HOM05D006482 ORTHO05D008149 2.2e-07 59.3 86 44.2
BcaC03g14399 Brassica carinata HOM05D006482 ORTHO05D008149 4.8e-07 58.2 73 46.6
C02p18140 Brassica napus HOM05D006482 ORTHO05D008149 4.8e-07 58.2 73 46.6
BolC2t07944H Brassica oleracea HOM05D006482 ORTHO05D008149 4.8e-07 58.2 73 46.6
vmacro13845 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 4.8e-07 58.2 45 57.8
CSS0015195 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 6.3e-07 57.8 44 61.4
Sed0001965 Sechium edule HOM05D006482 ORTHO05D008149 6.3e-07 57.8 74 48.6
CSS0018303 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 8.3e-07 57.4 43 62.8
Sc13g0010170 Simmondsia chinensis HOM05D006482 ORTHO05D008149 1.8e-06 56.2 61 47.5
CSS0007382 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 2.4e-06 55.8 73 49.3
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 3.1e-06 55.5 67 46.3
Rhsim07G0077300 Rhododendron simsii HOM05D006482 ORTHO05D008149 4.1e-06 55.1 41 63.4
Duzib084G1447 Durio zibethinus HOM05D006482 ORTHO05D008149 7.0e-06 54.3 61 49.2


User provided reference genes

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