Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31406 Sequoiadendron giganteum HOM05D016243 ORTHO05D037592 9.0e-153 543.5 264 100.0
SEGI_14648 Sequoiadendron giganteum HOM05D000154 ORTHO05D000092 1.5e-22 110.9 83 60.2
SEGI_23193 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.5e-22 110.2 83 61.4
SEGI_21130 Sequoiadendron giganteum HOM05D000060 ORTHO05D004147 4.3e-22 109.4 89 61.8
SEGI_34601 Sequoiadendron giganteum HOM05D016243 ORTHO05D386678 1.8e-20 104.0 71 71.8
SEGI_11437 Sequoiadendron giganteum HOM05D016243 ORTHO05D037592 3.8e-18 96.3 75 61.3
SEGI_25989 Sequoiadendron giganteum HOM05D016243 ORTHO05D016504 3.2e-17 93.2 87 49.4
SEGI_12303 Sequoiadendron giganteum HOM05D016243 ORTHO05D037592 5.1e-15 85.9 84 47.6
SEGI_41176 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.1e-15 85.9 84 47.6
SEGI_15912 Sequoiadendron giganteum HOM05D016243 ORTHO05D387164 1.5e-14 84.3 86 45.3
SEGI_01629 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 8.2e-13 78.6 89 44.9
SEGI_05772 Sequoiadendron giganteum HOM05D007858 ORTHO05D012441 4.1e-12 76.3 85 45.9
SEGI_10584 Sequoiadendron giganteum HOM05D000003 ORTHO05D006441 5.9e-11 72.4 77 44.2
SEGI_16217 Sequoiadendron giganteum HOM05D001025 ORTHO05D000837 7.6e-11 72.0 74 50.0
SEGI_19214 Sequoiadendron giganteum HOM05D000374 ORTHO05D000238 3.8e-10 69.7 51 66.7
SEGI_22598 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.5e-10 68.9 46 63.0
SEGI_31178 Sequoiadendron giganteum HOM05D000219 ORTHO05D006860 3.2e-09 66.6 154 33.8
SEGI_29767 Sequoiadendron giganteum HOM05D000207 ORTHO05D000606 5.5e-09 65.9 66 45.5
SEGI_32089 Sequoiadendron giganteum HOM05D003650 ORTHO05D004213 9.3e-09 65.1 60 43.3
SEGI_35196 Sequoiadendron giganteum HOM05D000938 ORTHO05D001451 9.3e-09 65.1 64 43.8
TWI60G1139 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.6e-08 64.3 66 50.0
SEGI_10599 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 2.1e-08 63.9 39 76.9
SEGI_12481 Sequoiadendron giganteum HOM05D000002 ORTHO05D383804 1.3e-07 61.2 78 39.7
Ah.11g048420 Amaranthus hybridus HOM05D000002 ORTHO05D000001 8.7e-07 58.5 43 51.2
AUR62036113 Chenopodium quinoa HOM05D000002 ORTHO05D000001 8.7e-07 58.5 126 30.2
SGA_v2.0_scaffold117G32381 Striga asiatica HOM05D000002 ORTHO05D006569 8.7e-07 58.5 127 29.1
CiPaw.01G128500 Carya illinoinensis HOM05D002092 ORTHO05D007041 1.9e-06 57.4 44 50.0
Ah.04g160330 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.5e-06 57.0 96 33.3
ECA236G4702 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-06 56.6 45 53.3
Sopen00g011370 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 56.6 78 41.0
Sopen12g014500 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-06 56.6 49 46.9
Aa31sc20G200 Aethionema arabicum HOM05D000002 ORTHO05D000001 4.3e-06 56.2 81 35.8
SEGI_33589 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.3e-06 56.2 83 37.3
Sopen03g011620 Solanum pennellii HOM05D000002 ORTHO05D000001 4.3e-06 56.2 80 41.2
AUR62023291 Chenopodium quinoa HOM05D000002 ORTHO05D000047 5.7e-06 55.8 124 28.2
AUR62024864 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.7e-06 55.8 41 51.2
AUR62040109 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.7e-06 55.8 41 51.2
SHI19124 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-06 55.5 47 46.8
Ah.08g217510 Amaranthus hybridus HOM05D000002 ORTHO05D000001 9.7e-06 55.1 48 50.0
SHI22439 Sapria himalayana HOM05D000002 ORTHO05D000001 9.7e-06 55.1 100 35.0
SHI36313 Sapria himalayana HOM05D000002 ORTHO05D000001 9.7e-06 55.1 47 46.8
THA.LOC104804180 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 9.7e-06 55.1 109 30.3


User provided reference genes

Program Settings