Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31391 Sequoiadendron giganteum HOM05D005588 ORTHO05D006615 6.4e-106 387.5 206 100.0
MBI03_g24016_MAGBIO Magnolia biondii HOM05D005588 ORTHO05D006615 2.6e-14 83.2 114 39.5
CANSAT64G0248 Cannabis sativa HOM05D005588 ORTHO05D006615 5.8e-14 82.0 114 39.5
ATR0626G258 Amborella trichopoda HOM05D005588 ORTHO05D006615 9.8e-14 81.3 120 40.0
PSO782G2071 Papaver somniferum HOM05D005588 ORTHO05D006615 6.4e-13 78.6 116 41.4
PSO063G5510 Papaver somniferum HOM05D005588 ORTHO05D006615 3.2e-12 76.3 116 40.5
TAR629G1265 Trochodendron aralioides HOM05D005588 ORTHO05D006615 4.1e-12 75.9 114 37.7
Mapoly0055s0077 Marchantia polymorpha HOM05D005588 ORTHO05D006615 7.0e-12 75.1 117 41.0
Thecc.02G311800 Theobroma cacao HOM05D005588 ORTHO05D006615 1.2e-11 74.3 114 38.6
Eucgr.G02567 Eucalyptus grandis HOM05D005588 ORTHO05D006615 2.7e-11 73.2 114 37.7
TWI53G2090 Tripterygium wilfordii HOM05D005588 ORTHO05D006615 4.6e-11 72.4 114 37.7
MD13G1007400 Malus domestica HOM05D005588 ORTHO05D006615 1.0e-10 71.2 97 36.1
Duzib248G1275 Durio zibethinus HOM05D005588 ORTHO05D006615 1.3e-10 70.9 114 39.5
GSVIVG01010179001 Vitis vinifera HOM05D005588 ORTHO05D006615 1.3e-10 70.9 114 36.8
Cc11_g00190 Coffea canephora HOM05D005588 ORTHO05D006615 1.7e-10 70.5 117 37.6
Sabra07G0059300 Salix brachista HOM05D005588 ORTHO05D006615 8.6e-10 68.2 114 38.6
Aqoxy3G04274 Aquilegia oxysepala HOM05D005588 ORTHO05D006615 1.1e-09 67.8 115 39.1
MSTRG.11941 Avicennia marina HOM05D005588 ORTHO05D006615 1.5e-09 67.4 115 35.7
CiPaw.09G164500 Carya illinoinensis HOM05D005588 ORTHO05D006615 1.5e-09 67.4 118 37.3
MD16G1000700 Malus domestica HOM05D005588 ORTHO05D006615 1.5e-09 67.4 113 34.5
Glyma.09G281400 Glycine max HOM05D005588 ORTHO05D006615 1.9e-09 67.0 127 33.9
Potri.007G070600 Populus trichocarpa HOM05D005588 ORTHO05D006615 2.5e-09 66.6 114 39.5
Gorai.013G027800 Gossypium raimondii HOM05D005588 ORTHO05D006615 3.3e-09 66.2 114 35.1
VMungo0251G1670 Vigna mungo HOM05D005588 ORTHO05D006615 3.3e-09 66.2 128 36.7
Gohir.A13G026000 Gossypium hirsutum HOM05D005588 ORTHO05D006615 4.3e-09 65.9 114 35.1
Phvul.003G006600 Phaseolus vulgaris HOM05D005588 ORTHO05D006615 5.6e-09 65.5 126 34.1
Prupe.1G345600 Prunus persica HOM05D005588 ORTHO05D006615 5.6e-09 65.5 114 31.6
Sc10g0006750 Simmondsia chinensis HOM05D005588 ORTHO05D006615 5.6e-09 65.5 114 36.8
Glyma.20G004400 Glycine max HOM05D005588 ORTHO05D006615 7.3e-09 65.1 127 33.1
Medtr1g036390 Medicago truncatula HOM05D005588 ORTHO05D006615 7.3e-09 65.1 127 32.3
Pp3c16_1360 Physcomitrium patens HOM05D005588 ORTHO05D006615 7.3e-09 65.1 117 35.9
CSS0004178 Camellia sinensis var. sinensis HOM05D005588 ORTHO05D006615 9.5e-09 64.7 114 35.1
Lj6C721G15 Lonicera japonica HOM05D005588 ORTHO05D006615 9.5e-09 64.7 95 38.9
Dinv17600 Davidia involucrata HOM05D005588 ORTHO05D006615 1.2e-08 64.3 114 35.1
Actinidia11175 Actinidia chinensis HOM05D005588 ORTHO05D006615 1.6e-08 63.9 111 34.2
Gohir.D13G024600 Gossypium hirsutum HOM05D005588 ORTHO05D006615 2.1e-08 63.5 114 34.2
Duzib251G0713 Durio zibethinus HOM05D005588 ORTHO05D006615 2.8e-08 63.2 115 33.0
Lj2g0013630 Lotus japonicus HOM05D005588 ORTHO05D006615 3.6e-08 62.8 137 30.7
Medtr4g074600 Medicago truncatula HOM05D005588 ORTHO05D006615 3.6e-08 62.8 115 37.4
Lsat_1_v5_gn_3_33621 Lactuca sativa HOM05D005588 ORTHO05D006615 6.2e-08 62.0 114 34.2
Psat6g098600 Pisum sativum HOM05D005588 ORTHO05D006615 6.2e-08 62.0 127 31.5
TPR.G32342 Trifolium pratense HOM05D005588 ORTHO05D006615 8.1e-08 61.6 115 33.9
arahy.Tifrunner.gnm1.ann1.J0Y6Y5 Arachis hypogaea HOM05D005588 ORTHO05D006615 1.1e-07 61.2 127 35.4
Peaxi162Scf01172g00038 Petunia axillaris HOM05D005588 ORTHO05D006615 1.4e-07 60.8 115 35.7
Ciclev10032024m.g Citrus clementina HOM05D005588 ORTHO05D006615 1.8e-07 60.5 114 31.6
CsaV3_3G031490 Cucumis sativus L. HOM05D005588 ORTHO05D006615 1.8e-07 60.5 114 33.3
SalBow1G0039 Salvia bowleyana HOM05D005588 ORTHO05D006615 1.8e-07 60.5 115 32.2
Rhsim06G0125900 Rhododendron simsii HOM05D005588 ORTHO05D006615 2.3e-07 60.1 114 34.2
arahy.Tifrunner.gnm1.ann1.HXF7IN Arachis hypogaea HOM05D005588 ORTHO05D006615 4.0e-07 59.3 126 34.1
EL10Ac9g22925 Beta vulgaris HOM05D005588 ORTHO05D006615 4.0e-07 59.3 117 35.0
Migut.A00690 Erythranthe guttata HOM05D005588 ORTHO05D006615 4.0e-07 59.3 115 33.0
ClCG10G011870 Citrullus lanatus HOM05D005588 ORTHO05D006615 5.2e-07 58.9 121 31.4
MELO3C024032.2 Cucumis melo HOM05D005588 ORTHO05D006615 5.2e-07 58.9 114 31.6
FvH4_4g36750 Fragaria vesca HOM05D005588 ORTHO05D006615 5.2e-07 58.9 114 28.1
AUR62015207 Chenopodium quinoa HOM05D005588 ORTHO05D006615 6.8e-07 58.5 115 35.7
DCAR_030400 Daucus carota HOM05D005588 ORTHO05D006615 6.8e-07 58.5 117 34.2
FAN07G0754 Fragaria x ananassa HOM05D005588 ORTHO05D006615 6.8e-07 58.5 114 28.9
FAN17G1536 Fragaria x ananassa HOM05D005588 ORTHO05D006615 6.8e-07 58.5 114 28.1
Nitab4.5_0000139g0120 Nicotiana tabacum HOM05D005588 ORTHO05D006615 6.8e-07 58.5 119 32.8
Os04g0674450 Oryza sativa ssp. japonica HOM05D005588 ORTHO05D006615 6.8e-07 58.5 114 33.3
Solyc04g009380.3 Solanum lycopersicum HOM05D005588 ORTHO05D006615 6.8e-07 58.5 120 36.7
Sopen04g004500 Solanum pennellii HOM05D005588 ORTHO05D006615 6.8e-07 58.5 120 36.7
TAR371G0486 Trochodendron aralioides HOM05D005588 ORTHO05D006615 6.8e-07 58.5 114 33.3
AUR62017670 Chenopodium quinoa HOM05D005588 ORTHO05D006615 8.9e-07 58.2 115 35.7
RcHm_v2.0_Chr4g0446471 Rosa chinensis HOM05D005588 ORTHO05D006615 8.9e-07 58.2 114 28.1
Atru.chr11.1235 Acer truncatum HOM05D005588 ORTHO05D006615 1.2e-06 57.8 114 33.3
Carub.0003s1840 Capsella rubella HOM05D005588 ORTHO05D006615 1.2e-06 57.8 89 40.4
PGSC0003DMG400032559 Solanum tuberosum HOM05D005588 ORTHO05D006615 1.2e-06 57.8 120 36.7
Peaxi162Scf00363g00733 Petunia axillaris HOM05D005588 ORTHO05D006615 1.5e-06 57.4 116 29.3
SalBow8G1527 Salvia bowleyana HOM05D005588 ORTHO05D006615 1.5e-06 57.4 115 31.3
vmacro12413 Vaccinium macrocarpon HOM05D005588 ORTHO05D006615 1.5e-06 57.4 114 33.3
AL3G31930 Arabidopsis lyrata HOM05D005588 ORTHO05D006615 2.0e-06 57.0 89 38.2
AT3G18620 Arabidopsis thaliana HOM05D005588 ORTHO05D006615 2.0e-06 57.0 89 38.2
BcaB06g25914 Brassica carinata HOM05D005588 ORTHO05D006615 2.0e-06 57.0 90 37.8
ECA246G5122 Erigeron canadensis HOM05D005588 ORTHO05D006615 2.0e-06 57.0 114 33.3
Thhalv10021331m.g Eutrema salsugineum HOM05D005588 ORTHO05D006615 2.0e-06 57.0 118 35.6
Pp3c13_19220 Physcomitrium patens HOM05D005588 ORTHO05D006615 2.0e-06 57.0 89 36.0
SGA_v2.0_scaffold173G39109 Striga asiatica HOM05D005588 ORTHO05D006615 2.0e-06 57.0 120 31.7
Aa31LG8G5470 Aethionema arabicum HOM05D005588 ORTHO05D006615 2.6e-06 56.6 89 39.3
A03p40750 Brassica napus HOM05D005588 ORTHO05D006615 2.6e-06 56.6 125 34.4
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 2.6e-06 56.6 115 34.8
Manes.11G109700 Manihot esculenta HOM05D005588 ORTHO05D006615 2.6e-06 56.6 114 34.2
Nitab4.5_0002392g0080 Nicotiana tabacum HOM05D005588 ORTHO05D006615 2.6e-06 56.6 119 31.1
BraA03t13232Z Brassica rapa HOM05D005588 ORTHO05D006615 3.4e-06 56.2 125 33.6
BcaB04g18995 Brassica carinata HOM05D005588 ORTHO05D006615 4.4e-06 55.8 117 36.8
ECA233G4991 Erigeron canadensis HOM05D005588 ORTHO05D006615 4.4e-06 55.8 115 33.0
BraA05t21941Z Brassica rapa HOM05D005588 ORTHO05D006615 5.8e-06 55.5 118 34.7
PGR142G3609 Punica granatum HOM05D005588 ORTHO05D006615 5.8e-06 55.5 117 36.8
Sed0008330 Sechium edule HOM05D005588 ORTHO05D006615 5.8e-06 55.5 113 30.1
Zm00001eb433550 Zea mays HOM05D005588 ORTHO05D006615 5.8e-06 55.5 114 34.2
Actinidia24397 Actinidia chinensis HOM05D005588 ORTHO05D006615 7.5e-06 55.1 114 31.6
Psat7g173520 Pisum sativum HOM05D005588 ORTHO05D006615 7.5e-06 55.1 117 33.3
BcaC01g03687 Brassica carinata HOM05D005588 ORTHO05D006615 9.9e-06 54.7 122 33.6
A05p30990 Brassica napus HOM05D005588 ORTHO05D006615 9.9e-06 54.7 118 34.7
C03p49620 Brassica napus HOM05D005588 ORTHO05D006615 9.9e-06 54.7 122 33.6
BolC3t17260H Brassica oleracea HOM05D005588 ORTHO05D006615 9.9e-06 54.7 122 33.6
HanXRQChr17g0540781 Helianthus annuus HOM05D005588 ORTHO05D006615 9.9e-06 54.7 114 35.1
Lalb_Chr04g0258921 Lupinus albus HOM05D005588 ORTHO05D006615 9.9e-06 54.7 116 29.3
Zm00001eb066460 Zea mays HOM05D005588 ORTHO05D006615 9.9e-06 54.7 114 33.3


User provided reference genes

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