Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31241 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 1.1e-124 449.9 208 100.0
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 4.4e-54 215.3 148 58.8
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 4.4e-54 215.3 148 58.8
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 1.7e-53 213.4 148 60.1
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 2.2e-53 213.0 148 60.1
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 8.3e-53 211.1 148 58.8
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 1.4e-52 210.3 148 58.1
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 2.4e-52 209.5 148 60.8
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 2.4e-52 209.5 148 59.5
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 4.1e-52 208.8 148 57.4
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 5.4e-52 208.4 148 60.1
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 5.4e-52 208.4 148 60.8
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 5.4e-52 208.4 148 60.8
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 5.4e-52 208.4 148 58.8
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 7.0e-52 208.0 148 58.1
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 7.0e-52 208.0 148 57.4
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 9.2e-52 207.6 148 60.1
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 2.0e-51 206.5 148 57.4
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 2.7e-51 206.1 148 58.1
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 2.7e-51 206.1 148 59.5
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 2.7e-51 206.1 148 58.1
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 3.5e-51 205.7 148 58.8
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 3.5e-51 205.7 148 56.8
Hma1.2p1_0393F.1_g143070 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 3.5e-51 205.7 148 58.1
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 3.5e-51 205.7 148 58.1
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 4.6e-51 205.3 148 58.1
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 4.6e-51 205.3 148 57.4
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 4.6e-51 205.3 148 58.1
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 4.6e-51 205.3 148 58.1
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 6.0e-51 204.9 148 56.8
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 1.0e-50 204.1 148 56.8
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 1.3e-50 203.8 148 57.4
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 1.7e-50 203.4 164 56.1
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 2.3e-50 203.0 148 57.4
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 2.3e-50 203.0 148 56.1
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 2.3e-50 203.0 148 57.4
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 2.3e-50 203.0 148 58.8
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 3.0e-50 202.6 148 60.1
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 3.0e-50 202.6 148 58.1
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 3.9e-50 202.2 149 59.7
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 3.9e-50 202.2 148 56.8
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 3.9e-50 202.2 148 56.8
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 3.9e-50 202.2 148 56.8
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 3.9e-50 202.2 148 58.1
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 3.9e-50 202.2 148 56.8
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 3.9e-50 202.2 148 57.4
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 5.0e-50 201.8 148 57.4
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 5.0e-50 201.8 148 57.4
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 6.6e-50 201.4 148 57.4
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 8.6e-50 201.1 148 56.1
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.5e-49 200.3 148 59.5
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 1.9e-49 199.9 148 57.4
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 1.9e-49 199.9 148 57.4
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 1.9e-49 199.9 148 56.1
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 1.9e-49 199.9 153 54.9
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 2.5e-49 199.5 148 54.7
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 2.5e-49 199.5 148 56.1
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 2.5e-49 199.5 148 56.1
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 4.3e-49 198.7 148 54.7
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 4.3e-49 198.7 148 55.4
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 4.3e-49 198.7 148 59.5
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 5.6e-49 198.4 148 56.8
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 7.3e-49 198.0 148 55.4
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 7.3e-49 198.0 145 57.2
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 1.2e-48 197.2 149 58.4
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 1.2e-48 197.2 147 58.5
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 1.2e-48 197.2 147 58.5
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 1.2e-48 197.2 149 58.4
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.1e-48 196.4 148 57.4
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 2.1e-48 196.4 148 56.1
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 2.8e-48 196.1 148 54.7
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 2.8e-48 196.1 148 57.4
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 2.8e-48 196.1 147 53.1
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 2.8e-48 196.1 149 58.4
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 2.8e-48 196.1 148 57.4
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 3.6e-48 195.7 148 54.7
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 3.6e-48 195.7 148 53.4
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 8.0e-48 194.5 148 52.0
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 8.0e-48 194.5 148 55.4
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 1.1e-47 194.1 149 55.7
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.4e-47 193.7 148 57.4
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 1.4e-47 193.7 148 54.1
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 1.8e-47 193.4 148 54.7
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 1.8e-47 193.4 148 54.7
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 4.0e-47 192.2 148 55.4
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 5.2e-47 191.8 149 57.0
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 5.2e-47 191.8 149 57.0
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 1.5e-46 190.3 149 55.0
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 1.5e-46 190.3 149 57.0
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 2.6e-46 189.5 148 53.4
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 2.6e-46 189.5 148 56.8
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 4.4e-46 188.7 161 52.2
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 1.7e-45 186.8 168 50.0
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 1.7e-45 186.8 148 51.4
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 2.2e-45 186.4 161 52.2
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 2.2e-45 186.4 161 52.2
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 2.9e-45 186.0 149 51.0
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 3.7e-45 185.7 149 55.7
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 4.9e-45 185.3 144 52.8
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 6.4e-45 184.9 145 53.8
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 6.4e-45 184.9 148 50.0
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 6.4e-45 184.9 149 50.3
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 6.4e-45 184.9 148 54.1
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 1.4e-44 183.7 150 52.0
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 1.4e-44 183.7 149 50.3
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 2.4e-44 183.0 148 48.6
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 5.4e-44 181.8 148 52.0
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 5.4e-44 181.8 201 42.8
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 7.0e-44 181.4 140 53.6
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 9.2e-44 181.0 148 54.1
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.1e-43 179.9 126 58.7
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 2.7e-43 179.5 148 52.0
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 1.3e-37 160.6 140 51.4
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 1.3e-37 160.6 150 48.7
FAN24G1627 Fragaria x ananassa HOM05D005302 ORTHO05D006422 5.1e-34 148.7 118 54.2
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 1.4e-31 140.6 153 41.2
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 6.8e-31 138.3 111 52.3
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 1.2e-30 137.5 114 52.6
Sabra18G0041600 Salix brachista HOM05D005302 ORTHO05D006422 1.5e-30 137.1 109 56.0
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 2.0e-30 136.7 109 53.2
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 2.2e-29 133.3 89 59.6
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 8.4e-29 131.3 109 51.4
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 4.6e-27 125.6 89 60.7
Potri.006G240100 Populus trichocarpa HOM05D005302 ORTHO05D006422 6.9e-23 111.7 108 47.2
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 1.5e-22 110.5 85 57.6
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 2.7e-19 99.8 66 62.1
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 6.6e-18 95.1 148 33.1
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 1.6e-16 90.5 144 34.0
Sabra18G0041700 Salix brachista HOM05D005302 ORTHO05D006422 4.2e-12 75.9 64 48.4
BcaC09g52073 Brassica carinata HOM05D002602 ORTHO05D002661 2.0e-06 57.0 41 58.5


User provided reference genes

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