Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31230 Sequoiadendron giganteum HOM05D000240 ORTHO05D384717 4.2e-147 524.6 257 100.0
Aqoxy6G00253 Aquilegia oxysepala HOM05D000240 ORTHO05D001153 4.4e-11 72.8 135 36.3
AagrBONN_evm.TU.Sc2ySwM_344.298 Anthoceros agrestis HOM05D000240 ORTHO05D001153 1.7e-10 70.9 139 33.1
Mapoly0019s0177 Marchantia polymorpha HOM05D000240 ORTHO05D001153 2.8e-10 70.1 140 35.0
Nn1g08877 Nelumbo nucifera HOM05D000240 ORTHO05D001153 3.7e-10 69.7 139 33.1
SEGI_21659 Sequoiadendron giganteum HOM05D000240 ORTHO05D001153 3.7e-10 69.7 138 30.4
TAR625G0455 Trochodendron aralioides HOM05D000240 ORTHO05D001153 4.8e-10 69.3 140 33.6
ATR0709G085 Amborella trichopoda HOM05D000240 ORTHO05D001153 6.3e-10 68.9 140 32.1
CiPaw.16G026800 Carya illinoinensis HOM05D000240 ORTHO05D001153 1.4e-09 67.8 141 36.9
CANSAT25G0935 Cannabis sativa HOM05D000240 ORTHO05D001153 1.8e-09 67.4 137 36.5
Prupe.1G493400 Prunus persica HOM05D000240 ORTHO05D001153 4.1e-09 66.2 142 33.1
Sed0010449 Sechium edule HOM05D000240 ORTHO05D001153 9.1e-09 65.1 139 33.1
Gohir.D05G238800 Gossypium hirsutum HOM05D000240 ORTHO05D001153 1.6e-08 64.3 136 31.6
Pp3c12_14710 Physcomitrium patens HOM05D000240 ORTHO05D001153 1.6e-08 64.3 140 35.7
MD00G1028900 Malus domestica HOM05D000240 ORTHO05D001153 2.0e-08 63.9 131 33.6
Eucgr.F03803 Eucalyptus grandis HOM05D000240 ORTHO05D001153 2.6e-08 63.5 139 30.2
HanXRQChr11g0326141 Helianthus annuus HOM05D000240 ORTHO05D001153 2.6e-08 63.5 139 32.4
MELO3C010629.2 Cucumis melo HOM05D000240 ORTHO05D001153 4.5e-08 62.8 140 32.9
Gohir.A05G236600 Gossypium hirsutum HOM05D000240 ORTHO05D001153 4.5e-08 62.8 137 32.1
SGA_v2.0_scaffold28G11987 Striga asiatica HOM05D000240 ORTHO05D001153 4.5e-08 62.8 134 33.6
ClCG00G002250 Citrullus lanatus HOM05D000240 ORTHO05D001153 7.7e-08 62.0 140 32.9
ClCG00G004840 Citrullus lanatus HOM05D000240 ORTHO05D001153 7.7e-08 62.0 140 32.9
ClCG08G005840 Citrullus lanatus HOM05D000240 ORTHO05D001153 7.7e-08 62.0 140 32.9
COL.COLO4_24737 Corchorus olitorius HOM05D000240 ORTHO05D001153 7.7e-08 62.0 140 32.1
Pp3c4_2270 Physcomitrium patens HOM05D000240 ORTHO05D001153 7.7e-08 62.0 140 38.6
Cc10_g12150 Coffea canephora HOM05D000240 ORTHO05D001153 1.3e-07 61.2 139 32.4
Lsat_1_v5_gn_4_136160 Lactuca sativa HOM05D000240 ORTHO05D001153 1.3e-07 61.2 139 33.8
Thecc.08G128700 Theobroma cacao HOM05D000240 ORTHO05D001153 1.3e-07 61.2 140 31.4
Haze_17508 Corylus avellana HOM05D000240 ORTHO05D001153 1.7e-07 60.8 143 30.8
CsaV3_6G034290 Cucumis sativus L. HOM05D000240 ORTHO05D001153 1.7e-07 60.8 140 31.4
Duzib093G1634 Durio zibethinus HOM05D000240 ORTHO05D001153 1.7e-07 60.8 141 31.9
PSO017G5687 Papaver somniferum HOM05D000240 ORTHO05D001153 2.2e-07 60.5 132 31.8
Cfa018571 Carpinus fangiana HOM05D000240 ORTHO05D001153 2.9e-07 60.1 140 30.7
Gorai.009G247500 Gossypium raimondii HOM05D000240 ORTHO05D001153 2.9e-07 60.1 142 31.7
Migut.N03272 Erythranthe guttata HOM05D000240 ORTHO05D001153 3.8e-07 59.7 131 31.3
GSVIVG01008843001 Vitis vinifera HOM05D000240 ORTHO05D001153 3.8e-07 59.7 139 28.8
Os04g0434600 Oryza sativa ssp. japonica HOM05D000240 ORTHO05D001153 5.0e-07 59.3 130 30.8
FAN24G1296 Fragaria x ananassa HOM05D000240 ORTHO05D001153 6.5e-07 58.9 132 30.3
Potri.002G081300 Populus trichocarpa HOM05D000240 ORTHO05D001153 1.1e-06 58.2 140 29.3
Peaxi162Scf00051g01514 Petunia axillaris HOM05D000240 ORTHO05D001153 1.5e-06 57.8 137 30.7
RcHm_v2.0_Chr6g0296241 Rosa chinensis HOM05D000240 ORTHO05D001153 1.5e-06 57.8 141 29.8
SalBow2G3460 Salvia bowleyana HOM05D000240 ORTHO05D001153 3.2e-06 56.6 132 28.0
Ciclev10000080m.g Citrus clementina HOM05D000240 ORTHO05D001153 7.2e-06 55.5 140 30.7
FAN20G0478 Fragaria x ananassa HOM05D000240 ORTHO05D001153 7.2e-06 55.5 132 29.5
FAN20G1438 Fragaria x ananassa HOM05D000240 ORTHO05D001153 7.2e-06 55.5 132 29.5
Nitab4.5_0000322g0080 Nicotiana tabacum HOM05D000240 ORTHO05D001153 7.2e-06 55.5 137 30.7
Zm00001eb082570 Zea mays HOM05D000240 ORTHO05D001153 7.2e-06 55.5 130 31.5
CAN.G643.2 Capsicum annuum HOM05D000240 ORTHO05D001153 9.4e-06 55.1 137 30.7
FvH4_2g27380 Fragaria vesca HOM05D000240 ORTHO05D001153 9.4e-06 55.1 132 29.5
FAN15G2196 Fragaria x ananassa HOM05D000240 ORTHO05D001153 9.4e-06 55.1 132 29.5
Phvul.001G072400 Phaseolus vulgaris HOM05D000240 ORTHO05D001153 9.4e-06 55.1 141 29.8


User provided reference genes

Program Settings