Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31203 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 9.0e-190 666.8 338 100.0
SEGI_41003 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 5.9e-173 610.9 333 94.3
SEGI_13637 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 3.8e-172 608.2 312 99.4
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 3.8e-172 608.2 312 99.4
SEGI_15283 Sequoiadendron giganteum HOM05D009451 ORTHO05D000681 3.0e-169 598.6 312 97.8
SEGI_40582 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 5.9e-165 584.3 313 95.5
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 2.5e-139 499.2 266 96.6
SEGI_17643 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 4.1e-134 481.9 249 98.4
SEGI_27541 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 7.3e-123 444.5 214 99.5
SEGI_28780 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 6.2e-82 308.5 150 98.7
SEGI_05928 Sequoiadendron giganteum HOM05D001750 ORTHO05D001825 4.5e-48 196.1 112 99.1
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 6.5e-31 139.0 184 39.7
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 5.5e-30 136.0 181 38.7
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 2.7e-29 133.7 142 45.8
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 2.7e-29 133.7 165 41.8
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 6.1e-29 132.5 160 40.6
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 1.0e-28 131.7 147 42.9
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 1.0e-28 131.7 147 42.9
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 1.0e-28 131.7 147 42.9
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 8.8e-28 128.6 160 40.0
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 8.8e-28 128.6 159 42.1
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 8.8e-28 128.6 159 42.1
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 8.8e-28 128.6 159 42.1
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 1.2e-27 128.3 206 36.4
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 1.2e-27 128.3 206 36.4
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 1.2e-27 128.3 206 36.4
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 1.2e-27 128.3 206 36.4
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 1.2e-27 128.3 206 36.4
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 9.7e-27 125.2 160 40.6
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 1.7e-26 124.4 162 43.2
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 2.8e-26 123.6 158 40.5
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 2.8e-26 123.6 158 40.5
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 2.8e-26 123.6 158 40.5
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 2.4e-25 120.6 161 40.4
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 1.2e-24 118.2 154 40.3
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 1.2e-24 118.2 117 43.6
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.6e-24 117.9 118 44.9
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.0e-23 115.2 171 36.3
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 1.3e-23 114.8 161 39.8
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 1.2e-21 108.2 166 35.5
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 2.7e-21 107.1 138 40.6
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 3.6e-21 106.7 148 40.5
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 8.0e-21 105.5 139 41.7
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 1.0e-20 105.1 123 42.3
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 2.3e-20 104.0 135 41.5
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 2.2e-18 97.4 122 41.0
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 2.8e-18 97.1 129 41.1
Gohir.A11G193450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 3.7e-18 96.7 104 42.3
Lju5009P0T46 Lonicera japonica HOM05D001070 ORTHO05D010233 4.8e-18 96.3 125 40.0
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 2.9e-15 87.0 170 31.8
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 2.1e-13 80.9 88 40.9
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 2.3e-12 77.4 121 34.7
HPP92_028417 Vanilla planifolia HOM05D001070 ORTHO05D010233 3.0e-12 77.0 113 36.3
SEGI_13178 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 5.7e-11 72.8 51 80.4
Gohir.D11G334350 Gossypium hirsutum HOM05D001070 ORTHO05D010233 9.8e-11 72.0 101 41.6
CsaV3_1G025490 Cucumis sativus L. HOM05D001070 ORTHO05D013014 1.3e-10 71.6 71 45.1
Gohir.D04G101450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 2.2e-10 70.9 77 41.6
Solyc11g021280.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 2.8e-10 70.5 81 44.4
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 2.8e-10 70.5 103 37.9
Nn6g34149 Nelumbo nucifera HOM05D001070 ORTHO05D010233 1.8e-09 67.8 78 42.3
Nn029s41578 Nelumbo nucifera HOM05D001070 ORTHO05D010233 3.1e-09 67.0 63 49.2
SGA_v2.0_scaffold893G53699 Striga asiatica HOM05D001070 ORTHO05D010233 1.7e-07 61.2 153 34.0
SEGI_07498 Sequoiadendron giganteum HOM05D004161 ORTHO05D015225 3.8e-07 60.1 57 59.6
GSVIVG01009552001 Vitis vinifera HOM05D001070 ORTHO05D010233 7.3e-06 55.8 105 33.3


User provided reference genes

Program Settings