Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31202 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 4.5e-300 1033.9 543 100.0
SEGI_34443 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.9e-142 509.2 581 55.1
SEGI_24052 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 8.9e-123 444.9 498 52.0
SEGI_20815 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.7e-79 300.4 439 43.3
SEGI_10680 Sequoiadendron giganteum HOM05D001800 ORTHO05D000239 3.9e-78 296.6 533 37.3
SEGI_11738 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.1e-77 295.0 323 51.4
SEGI_28234 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 4.3e-77 293.1 478 39.7
SEGI_09838 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.5e-61 241.5 434 39.4
SEGI_04735 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 8.2e-60 235.7 475 35.8
SEGI_07523 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 4.0e-54 216.9 473 33.4
SEGI_10919 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.6e-53 214.2 457 39.4
SEGI_04253 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 4.4e-53 213.4 483 35.0
SEGI_32660 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.5e-48 198.4 462 34.0
SEGI_08513 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.5e-48 197.6 252 47.6
SEGI_20895 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.5e-48 197.6 252 47.6
SEGI_09565 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.0e-41 175.6 343 35.9
SEGI_32748 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.9e-40 171.4 283 38.9
SEGI_16457 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.5e-40 169.9 325 36.6
SEGI_03687 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.8e-38 164.9 447 31.8
SEGI_17759 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 4.0e-38 163.7 344 36.3
SEGI_11654 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 8.8e-38 162.5 369 34.1
SEGI_27822 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.1e-35 155.6 356 33.7
SEGI_39251 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.1e-35 155.6 356 33.7
SEGI_10106 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.4e-35 155.2 504 29.4
SEGI_34894 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 7.0e-35 152.9 541 28.5
SEGI_40228 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.0e-33 149.1 202 42.6
SEGI_23039 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.8e-33 147.1 317 35.6
SEGI_16243 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.2e-31 142.1 336 34.2
SEGI_07048 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 8.9e-30 136.0 146 49.3
SEGI_12675 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.9e-28 131.0 365 29.9
SEGI_18246 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.9e-28 131.0 365 29.9
SEGI_03692 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.4e-27 128.6 188 40.4
SEGI_19464 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.4e-27 128.6 239 38.5
SEGI_11306 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.7e-26 124.4 267 33.7
SEGI_03783 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.5e-26 124.0 404 27.7
SEGI_19982 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.6e-24 116.7 202 38.6
SEGI_19292 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.1e-23 114.8 209 37.3
SEGI_41386 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.1e-23 114.8 365 30.4
SEGI_17105 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.1e-22 110.9 360 28.9
SEGI_41337 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 4.0e-22 110.5 318 32.1
SEGI_22871 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.3e-20 105.5 246 33.7
SEGI_17845 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.7e-20 105.1 290 30.3
SEGI_34360 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.2e-20 104.8 208 35.6
SEGI_29122 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.7e-20 104.0 303 29.0
SEGI_12912 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.2e-18 99.0 358 26.8
SEGI_07321 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.6e-17 93.2 165 37.6
SEGI_23405 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 7.3e-16 89.7 277 25.6
SEGI_10207 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.6e-15 87.4 128 43.0
SEGI_30360 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.1e-14 85.9 110 45.5
SEGI_32389 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.1e-14 84.3 309 27.2
SEGI_25393 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.8e-14 83.2 317 25.9
SEGI_11815 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 8.9e-14 82.8 292 27.1
SEGI_39117 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 8.9e-14 82.8 132 43.2
SEGI_01070 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.2e-13 82.4 226 33.2
SEGI_27265 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.5e-13 82.0 154 37.0
SEGI_36750 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.0e-13 81.6 300 28.3
SEGI_21586 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.6e-13 81.3 245 29.8
Potri.014G003600 Populus trichocarpa HOM05D000009 ORTHO05D000008 9.8e-13 79.3 323 27.2
Cc01_g05220 Coffea canephora HOM05D000009 ORTHO05D000008 3.7e-12 77.4 402 22.9
MD07G1260700 Malus domestica HOM05D003506 ORTHO05D000012 6.4e-12 76.6 353 23.2
SEGI_37192 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.2e-11 74.3 86 47.7
AT5G46450 Arabidopsis thaliana HOM05D000005 ORTHO05D000449 4.1e-11 73.9 351 25.6
Nn8g40999 Nelumbo nucifera HOM05D000005 ORTHO05D000012 1.6e-10 72.0 302 26.2
SEGI_20532 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.6e-10 72.0 296 27.7
SEGI_24827 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.6e-10 72.0 296 27.7
SEGI_39742 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.7e-10 71.2 177 35.0
Potri.014G005600 Populus trichocarpa HOM05D000009 ORTHO05D000008 6.0e-10 70.1 285 26.7
BcaB03g15226 Brassica carinata HOM05D000005 ORTHO05D000449 7.8e-10 69.7 349 24.6
Dinv25459 Davidia involucrata HOM05D000009 ORTHO05D000008 7.8e-10 69.7 260 29.2
SEGI_32594 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.7e-09 68.6 102 38.2
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 3.0e-09 67.8 288 26.7
RcHm_v2.0_Chr1g0323841 Rosa chinensis HOM05D000009 ORTHO05D000008 5.1e-09 67.0 332 25.6
Peaxi162Scf00637g00219 Petunia axillaris HOM05D000009 ORTHO05D000008 6.6e-09 66.6 316 25.6
Peaxi162Scf01108g00110 Petunia axillaris HOM05D000009 ORTHO05D000008 6.6e-09 66.6 261 28.0
COL.COLO4_16912 Corchorus olitorius HOM05D003506 ORTHO05D004063 8.6e-09 66.2 348 25.9
SEGI_22733 Sequoiadendron giganteum HOM05D015746 ORTHO05D000239 8.6e-09 66.2 49 63.3
arahy.Tifrunner.gnm1.ann1.H64XLR Arachis hypogaea HOM05D000009 ORTHO05D000008 1.1e-08 65.9 293 27.6
Peaxi162Scf00757g00425 Petunia axillaris HOM05D000009 ORTHO05D000008 1.1e-08 65.9 316 25.6
Peaxi162Scf01747g00002 Petunia axillaris HOM05D000009 ORTHO05D000008 1.1e-08 65.9 316 25.6
CSS0044768 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D010531 1.5e-08 65.5 228 28.1
ECA233G2099 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.9e-08 65.1 231 26.8
MD01G1189200 Malus domestica HOM05D000005 ORTHO05D000012 1.9e-08 65.1 371 25.3
AL7G35050 Arabidopsis lyrata HOM05D003506 ORTHO05D004063 2.5e-08 64.7 269 26.4
CSS0045919 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 2.5e-08 64.7 267 26.6
PGSC0003DMG400017666 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.5e-08 64.7 314 23.6
BcaC09g51442 Brassica carinata HOM05D003506 ORTHO05D004063 3.3e-08 64.3 177 28.8
BolC1t01282H Brassica oleracea HOM05D003506 ORTHO05D004063 3.3e-08 64.3 177 28.8
Ca_00603_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 3.3e-08 64.3 363 27.5
Zm00001eb138420 Zea mays HOM05D000009 ORTHO05D016370 3.3e-08 64.3 262 28.2
Glyma.15G231500 Glycine max HOM05D000009 ORTHO05D000008 4.3e-08 63.9 329 26.4
Sopen11g025560 Solanum pennellii HOM05D000009 ORTHO05D000008 4.3e-08 63.9 242 28.5
C01p13080 Brassica napus HOM05D003506 ORTHO05D004063 5.6e-08 63.5 177 28.8
SEGI_40041 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.6e-08 63.5 109 35.8
TPR.G3823 Trifolium pratense HOM05D000009 ORTHO05D000008 5.6e-08 63.5 333 24.6
CAN.G1149.3 Capsicum annuum HOM05D000009 ORTHO05D000008 7.3e-08 63.2 300 24.3
Glyma.13G184800 Glycine max HOM05D000009 ORTHO05D000008 7.3e-08 63.2 304 26.6
Potri.006G273900 Populus trichocarpa HOM05D000009 ORTHO05D000008 7.3e-08 63.2 266 24.4
COL.COLO4_23685 Corchorus olitorius HOM05D000009 ORTHO05D000008 9.5e-08 62.8 354 27.4
ECA248G1886 Erigeron canadensis HOM05D000009 ORTHO05D000008 9.5e-08 62.8 299 22.4
Nn6g34479 Nelumbo nucifera HOM05D000009 ORTHO05D000008 9.5e-08 62.8 264 27.3
PGSC0003DMG400018574 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.5e-08 62.8 294 24.8
Gorai.005G009700 Gossypium raimondii HOM05D000009 ORTHO05D000008 1.2e-07 62.4 347 22.8
SEGI_27639 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.2e-07 62.4 137 29.9
ECA233G4636 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.6e-07 62.0 378 23.3
SEGI_34591 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.6e-07 62.0 199 24.1
TPR.G10881 Trifolium pratense HOM05D000009 ORTHO05D000008 1.6e-07 62.0 293 26.3
Eucgr.B01032 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.1e-07 61.6 322 23.3
Gohir.D11G330000 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.1e-07 61.6 329 24.9
A01p11060 Brassica napus HOM05D003506 ORTHO05D004063 2.8e-07 61.2 177 26.6
Eucgr.H03812 Eucalyptus grandis HOM05D000005 ORTHO05D029333 2.8e-07 61.2 185 24.9
QL04p007111 Quercus lobata HOM05D000009 ORTHO05D000008 2.8e-07 61.2 446 22.6
SEGI_07194 Sequoiadendron giganteum HOM05D000415 ORTHO05D000239 2.8e-07 61.2 188 26.1
Solyc11g071390.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.8e-07 61.2 271 22.5
Lj8C511T0 Lonicera japonica HOM05D000009 ORTHO05D000008 3.6e-07 60.8 351 23.6
Lj7C155T3 Lonicera japonica HOM05D000009 ORTHO05D000008 4.7e-07 60.5 331 22.4
Sopen11g029100 Solanum pennellii HOM05D000009 ORTHO05D000008 4.7e-07 60.5 266 25.2
GSVIVG01027276001 Vitis vinifera HOM05D000009 ORTHO05D000008 4.7e-07 60.5 336 24.1
BcaNung04011 Brassica carinata HOM05D003506 ORTHO05D004063 6.2e-07 60.1 181 24.9
CiPaw.14G097200 Carya illinoinensis HOM05D000009 ORTHO05D000008 6.2e-07 60.1 398 22.9
Lj8C463G7 Lonicera japonica HOM05D000009 ORTHO05D000008 6.2e-07 60.1 266 24.4
TPR.G35841 Trifolium pratense HOM05D000005 ORTHO05D000012 6.2e-07 60.1 321 23.7
Peaxi162Scf01048g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 8.1e-07 59.7 281 23.1
Rhsim07G0069600 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.1e-07 59.7 290 26.2
TPR.G20861 Trifolium pratense HOM05D000009 ORTHO05D000008 8.1e-07 59.7 265 24.9
Zm00001eb291370 Zea mays HOM05D000009 ORTHO05D000008 8.1e-07 59.7 244 26.6
arahy.Tifrunner.gnm1.ann1.42UKH4 Arachis hypogaea HOM05D000009 ORTHO05D000008 1.1e-06 59.3 253 26.5
BraA01t01053Z Brassica rapa HOM05D003506 ORTHO05D004063 1.1e-06 59.3 177 26.6
Prupe.2G040700 Prunus persica HOM05D000009 ORTHO05D000008 1.1e-06 59.3 277 23.8
SEGI_37903 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.1e-06 59.3 177 31.6
Solyc03g078300.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.1e-06 59.3 152 30.9
TPR.G10837 Trifolium pratense HOM05D000009 ORTHO05D000008 1.1e-06 59.3 259 26.3
Cc01_g01600 Coffea canephora HOM05D000009 ORTHO05D000008 1.4e-06 58.9 319 23.8
Dinv20835 Davidia involucrata HOM05D000009 ORTHO05D000008 1.4e-06 58.9 284 25.0
Hma1.2p1_0251F.1_g102550 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.4e-06 58.9 299 24.4
Hma1.2p1_0251F.1_g102553 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 1.4e-06 58.9 299 24.4
Lj7C146T2 Lonicera japonica HOM05D000009 ORTHO05D000008 1.4e-06 58.9 337 23.1
Manes.10G133695 Manihot esculenta HOM05D000009 ORTHO05D000008 1.4e-06 58.9 221 30.3
PGR142G3410 Punica granatum HOM05D000005 ORTHO05D000012 1.4e-06 58.9 190 28.4
Sopen03g021050 Solanum pennellii HOM05D000009 ORTHO05D000008 1.4e-06 58.9 152 30.9
TPR.G10597 Trifolium pratense HOM05D000009 ORTHO05D000008 1.4e-06 58.9 150 31.3
CAN.G2377.1 Capsicum annuum HOM05D000009 ORTHO05D000008 1.8e-06 58.5 235 24.3
Duzib106G1825 Durio zibethinus HOM05D000009 ORTHO05D000008 1.8e-06 58.5 333 22.5
Eucgr.B01033 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.8e-06 58.5 299 26.4
Glyma.18G281700 Glycine max HOM05D001292 ORTHO05D001202 1.8e-06 58.5 365 24.9
PGR142G4482 Punica granatum HOM05D000005 ORTHO05D007073 1.8e-06 58.5 173 28.3
SalBow2G3196 Salvia bowleyana HOM05D000009 ORTHO05D000008 1.8e-06 58.5 200 26.5
CiPaw.14G130400 Carya illinoinensis HOM05D000005 ORTHO05D020377 2.3e-06 58.2 183 26.2
FAN06G0610 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.3e-06 58.2 325 22.8
MD02G1053100 Malus domestica HOM05D000005 ORTHO05D000012 2.3e-06 58.2 288 27.8
Sp2g00780 Schrenkiella parvula HOM05D000005 ORTHO05D000449 2.3e-06 58.2 260 26.2
SEGI_26568 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.3e-06 58.2 177 31.6
PGSC0003DMG402030235 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.3e-06 58.2 250 26.4
arahy.Tifrunner.gnm1.ann1.677PQ2 Arachis hypogaea HOM05D000005 ORTHO05D000012 3.1e-06 57.8 221 25.3
A06p45900 Brassica napus HOM05D000005 ORTHO05D000449 3.1e-06 57.8 321 22.4
Haze_03081 Corylus avellana HOM05D000009 ORTHO05D000008 3.1e-06 57.8 253 26.9
FAN03G0120 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.1e-06 57.8 222 28.4
QL04p011435 Quercus lobata HOM05D000009 ORTHO05D000008 3.1e-06 57.8 224 27.7
Rhsim07G0070900 Rhododendron simsii HOM05D000009 ORTHO05D000008 3.1e-06 57.8 418 22.5
arahy.Tifrunner.gnm1.ann1.8YN2ZH Arachis hypogaea HOM05D000009 ORTHO05D000008 4.0e-06 57.4 203 26.6
CiPaw.15G157400 Carya illinoinensis HOM05D000005 ORTHO05D000012 4.0e-06 57.4 302 22.5
FvH4_7g02890 Fragaria vesca HOM05D000009 ORTHO05D000008 4.0e-06 57.4 325 22.5
SEGI_24803 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 4.0e-06 57.4 79 43.0
PGSC0003DMG400013721 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.0e-06 57.4 163 28.2
Cc01_g05240 Coffea canephora HOM05D000009 ORTHO05D000008 5.2e-06 57.0 367 21.3
Lj1g0016459 Lotus japonicus HOM05D000092 ORTHO05D000042 5.2e-06 57.0 178 30.9
MD02G1039200 Malus domestica HOM05D000005 ORTHO05D000012 5.2e-06 57.0 249 26.5
Dinv25466 Davidia involucrata HOM05D000009 ORTHO05D000008 6.8e-06 56.6 212 26.9
Eucgr.H03699 Eucalyptus grandis HOM05D000005 ORTHO05D000012 6.8e-06 56.6 194 26.3
Gorai.005G009900 Gossypium raimondii HOM05D000009 ORTHO05D000008 6.8e-06 56.6 188 27.1
Nitab4.5_0011718g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.8e-06 56.6 264 27.3
RcHm_v2.0_Chr7g0237021 Rosa chinensis HOM05D000009 ORTHO05D000008 6.8e-06 56.6 260 27.3
SEGI_17286 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.8e-06 56.6 141 29.1
arahy.Tifrunner.gnm1.ann1.IYM9J9 Arachis hypogaea HOM05D000009 ORTHO05D000008 8.9e-06 56.2 277 24.2
BcaC01g04610 Brassica carinata HOM05D000005 ORTHO05D012037 8.9e-06 56.2 165 27.3
C03p35730 Brassica napus HOM05D000005 ORTHO05D012037 8.9e-06 56.2 165 27.3
Cc01_g05280 Coffea canephora HOM05D000009 ORTHO05D000008 8.9e-06 56.2 240 23.8
Gohir.D03G159250 Gossypium hirsutum HOM05D000009 ORTHO05D000008 8.9e-06 56.2 151 28.5
Rhsim01G0055800 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.9e-06 56.2 184 27.2
Sabra16G0208600 Salix brachista HOM05D000009 ORTHO05D000008 8.9e-06 56.2 268 24.3


User provided reference genes

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