Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31167 Sequoiadendron giganteum HOM05D015746 ORTHO05D010901 1.2e-104 383.3 207 100.0
SEGI_10100 Sequoiadendron giganteum HOM05D015746 ORTHO05D010901 7.8e-35 151.4 104 71.2
SEGI_19200 Sequoiadendron giganteum HOM05D015746 ORTHO05D002750 5.6e-17 92.0 127 43.3
SEGI_25620 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.7e-16 89.0 119 39.5
SEGI_18186 Sequoiadendron giganteum HOM05D015746 ORTHO05D000014 1.8e-15 87.0 86 48.8
SEGI_32745 Sequoiadendron giganteum HOM05D015746 ORTHO05D010901 1.8e-15 87.0 102 43.1
SEGI_20358 Sequoiadendron giganteum HOM05D015746 ORTHO05D002750 9.9e-14 81.3 87 44.8
SEGI_36517 Sequoiadendron giganteum HOM05D016968 ORTHO05D000014 2.2e-13 80.1 77 48.1
SEGI_13189 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.9e-12 77.0 92 42.4
Atru.chr9.1405 Acer truncatum HOM05D000023 ORTHO05D000014 9.2e-12 74.7 105 36.2
Aqoxy7G00677 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 1.7e-10 70.5 105 35.2
MBI04_g35666_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 2.3e-10 70.1 120 34.2
QL12p014306 Quercus lobata HOM05D000023 ORTHO05D000014 2.3e-10 70.1 82 41.5
Hma1.2p1_1290F.1_g273420 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.0e-10 69.7 107 33.6
SEGI_15467 Sequoiadendron giganteum HOM05D015746 ORTHO05D010901 5.1e-10 68.9 82 42.7
Nitab4.5_0001707g0100 Nicotiana tabacum HOM05D000023 ORTHO05D013611 6.6e-10 68.6 109 35.8
Nitab4.5_0001707g0130 Nicotiana tabacum HOM05D000023 ORTHO05D000014 1.1e-09 67.8 109 35.8
Cpa.g.sc29.102 Carica papaya HOM05D000023 ORTHO05D000014 2.5e-09 66.6 79 38.0
Nitab4.5_0001816g0230 Nicotiana tabacum HOM05D000023 ORTHO05D000014 2.5e-09 66.6 93 38.7
Cc08_g13130 Coffea canephora HOM05D000023 ORTHO05D000014 3.3e-09 66.2 105 33.3
PGR031G2722 Punica granatum HOM05D000023 ORTHO05D000014 3.3e-09 66.2 106 34.9
Rhsim03G0000500 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.3e-09 66.2 92 37.0
Nn4g26353 Nelumbo nucifera HOM05D000023 ORTHO05D000014 4.3e-09 65.9 93 38.7
Sed0009568 Sechium edule HOM05D000023 ORTHO05D000014 4.3e-09 65.9 101 34.7
PGSC0003DMG401012482 Solanum tuberosum HOM05D000023 ORTHO05D000014 4.3e-09 65.9 93 37.6
GSVIVG01007419001 Vitis vinifera HOM05D000023 ORTHO05D000014 4.3e-09 65.9 105 33.3
MELO3C032274.2 Cucumis melo HOM05D000023 ORTHO05D000014 7.3e-09 65.1 102 37.3
CsaV3_3G003120 Cucumis sativus L. HOM05D000023 ORTHO05D000014 7.3e-09 65.1 102 37.3
CSS0035116 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.6e-09 64.7 106 35.8
Duzib084G0577 Durio zibethinus HOM05D000023 ORTHO05D000014 9.6e-09 64.7 105 34.3
ClCG01G000670 Citrullus lanatus HOM05D000023 ORTHO05D000014 1.2e-08 64.3 100 34.0
FvH4_5g00491 Fragaria vesca HOM05D000023 ORTHO05D000014 2.1e-08 63.5 82 37.8
Solyc08g007470.2 Solanum lycopersicum HOM05D000023 ORTHO05D000014 2.1e-08 63.5 93 36.6
PSO782G3141 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-08 63.2 91 35.2
RcHm_v2.0_Chr7g0202011 Rosa chinensis HOM05D000023 ORTHO05D000014 2.8e-08 63.2 105 33.3
Sopen08g003430 Solanum pennellii HOM05D000023 ORTHO05D000014 3.6e-08 62.8 93 36.6
HPP92_007622 Vanilla planifolia HOM05D000023 ORTHO05D000014 4.7e-08 62.4 56 46.4
Nitab4.5_0000098g0210 Nicotiana tabacum HOM05D000023 ORTHO05D000014 6.2e-08 62.0 60 50.0
Oeu022707.2 Olea europaea HOM05D000023 ORTHO05D000014 6.2e-08 62.0 60 50.0
PSO478G2275 Papaver somniferum HOM05D000023 ORTHO05D000014 6.2e-08 62.0 91 35.2
Sabra01G0091500 Salix brachista HOM05D000023 ORTHO05D000014 8.1e-08 61.6 71 38.0
SGA_v2.0_scaffold64G22025 Striga asiatica HOM05D000023 ORTHO05D000014 1.8e-07 60.5 60 50.0
Cc03_g00140 Coffea canephora HOM05D000023 ORTHO05D000014 2.4e-07 60.1 60 48.3
Atru.chr4.3145 Acer truncatum HOM05D000023 ORTHO05D000014 3.1e-07 59.7 60 46.7
CANSAT21G0240 Cannabis sativa HOM05D000023 ORTHO05D000014 3.1e-07 59.7 64 40.6
TAR480G0001 Trochodendron aralioides HOM05D000023 ORTHO05D000014 3.1e-07 59.7 105 31.4
CSS0008819 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.0e-07 59.3 60 48.3
CDE06G2340 Ceratophyllum demersum HOM05D000023 ORTHO05D000014 4.0e-07 59.3 60 48.3
Rhsim03G0197500 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.0e-07 59.3 85 35.3
vmacro06584 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 4.0e-07 59.3 85 35.3
Aa31LG8G4400 Aethionema arabicum HOM05D000023 ORTHO05D000014 5.3e-07 58.9 60 48.3
AT3G17450 Arabidopsis thaliana HOM05D000023 ORTHO05D000014 5.3e-07 58.9 60 48.3
Thhalv10020031m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 5.3e-07 58.9 60 48.3
Sp3g15620 Schrenkiella parvula HOM05D000023 ORTHO05D000014 5.3e-07 58.9 60 48.3
AUR62002557 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.9e-07 58.5 60 48.3
AUR62029977 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.9e-07 58.5 60 48.3
AUR62031480 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.9e-07 58.5 73 35.6
Nitab4.5_0000472g0210 Nicotiana tabacum HOM05D000023 ORTHO05D000014 6.9e-07 58.5 85 34.1
Prupe.1G105600 Prunus persica HOM05D000023 ORTHO05D000014 6.9e-07 58.5 109 36.7
Rhsim04G0165800 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.9e-07 58.5 60 48.3
THA.LOC104814753 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 6.9e-07 58.5 74 36.5
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 9.0e-07 58.2 92 40.2
Hund04822 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.0e-07 58.2 88 34.1
Thecc.04G312700 Theobroma cacao HOM05D000023 ORTHO05D000014 9.0e-07 58.2 74 43.2
Ah.13g073040 Amaranthus hybridus HOM05D000023 ORTHO05D000014 1.2e-06 57.8 60 46.7
C01p46790 Brassica napus HOM05D000023 ORTHO05D000014 1.2e-06 57.8 60 48.3
BolC1t04652H Brassica oleracea HOM05D000023 ORTHO05D000014 1.2e-06 57.8 60 48.3
PSO170G4534 Papaver somniferum HOM05D000023 ORTHO05D000014 1.2e-06 57.8 60 46.7
PSO357G0624 Papaver somniferum HOM05D000023 ORTHO05D000014 1.2e-06 57.8 60 46.7
THA.LOC104802620 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 1.2e-06 57.8 60 46.7
MSTRG.27051 Avicennia marina HOM05D000023 ORTHO05D000014 1.5e-06 57.4 91 33.0
MELO3C005863.2 Cucumis melo HOM05D000023 ORTHO05D000014 1.5e-06 57.4 99 32.3
Hma1.2p1_0013F.1_g007920 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-06 57.4 89 39.3
PSO384G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 1.5e-06 57.4 94 31.9
Peaxi162Scf00904g00461 Petunia axillaris HOM05D000023 ORTHO05D000014 1.5e-06 57.4 85 34.1
QL09p011205 Quercus lobata HOM05D000023 ORTHO05D000014 1.5e-06 57.4 85 35.3
ECA240G1975 Erigeron canadensis HOM05D000023 ORTHO05D000014 2.0e-06 57.0 76 31.6
Manes.01G233700 Manihot esculenta HOM05D000023 ORTHO05D000014 2.0e-06 57.0 75 45.3
AL3G30530 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 2.6e-06 56.6 104 34.6
CDE04G3760 Ceratophyllum demersum HOM05D000023 ORTHO05D000014 2.6e-06 56.6 88 33.0
ECA233G3146 Erigeron canadensis HOM05D000023 ORTHO05D000014 2.6e-06 56.6 92 40.2
FvH4_7g30891 Fragaria vesca HOM05D000023 ORTHO05D000014 2.6e-06 56.6 90 31.1
MBI19_g32734_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 2.6e-06 56.6 84 38.1
QL10p065989 Quercus lobata HOM05D000009 ORTHO05D000008 2.6e-06 56.6 74 35.1
Zm00001eb220690 Zea mays HOM05D000023 ORTHO05D000014 2.6e-06 56.6 92 38.0
A01p36900 Brassica napus HOM05D000023 ORTHO05D000014 3.4e-06 56.2 60 46.7
CSS0012239 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.4e-06 56.2 95 31.6
CSS0036184 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.4e-06 56.2 95 31.6
CARHR092770 Cardamine hirsuta HOM05D000023 ORTHO05D000014 3.4e-06 56.2 107 34.6
MD13G1139200 Malus domestica HOM05D000023 ORTHO05D000014 3.4e-06 56.2 60 45.0
MD16G1136600 Malus domestica HOM05D000023 ORTHO05D000014 3.4e-06 56.2 60 45.0
Psat1g017480 Pisum sativum HOM05D000023 ORTHO05D000014 3.4e-06 56.2 93 39.8
SHI21431 Sapria himalayana HOM05D005437 ORTHO05D002750 3.4e-06 56.2 116 29.3
TPR.G24695 Trifolium pratense HOM05D000023 ORTHO05D000014 3.4e-06 56.2 93 39.8
TWI09G0737 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.4e-06 56.2 93 36.6
Aqoxy5G02793 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 4.4e-06 55.8 60 46.7
BraA01t03749Z Brassica rapa HOM05D000023 ORTHO05D000014 4.4e-06 55.8 60 46.7
CsaV3_5G000770 Cucumis sativus L. HOM05D000023 ORTHO05D000014 4.4e-06 55.8 83 32.5
Os01g0222700 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 4.4e-06 55.8 76 36.8
arahy.Tifrunner.gnm1.ann1.GKHQ6E Arachis hypogaea HOM05D000023 ORTHO05D000014 5.8e-06 55.5 93 38.7
arahy.Tifrunner.gnm1.ann1.J9UGKB Arachis hypogaea HOM05D000023 ORTHO05D000014 5.8e-06 55.5 91 29.7
arahy.Tifrunner.gnm1.ann1.W645MI Arachis hypogaea HOM05D000023 ORTHO05D000014 5.8e-06 55.5 93 38.7
CANSAT21G0690 Cannabis sativa HOM05D000023 ORTHO05D000014 5.8e-06 55.5 95 28.4
Cpa.g.sc3.39 Carica papaya HOM05D000023 ORTHO05D000014 5.8e-06 55.5 88 33.0
Migut.G00001 Erythranthe guttata HOM05D000023 ORTHO05D000014 5.8e-06 55.5 100 39.0
Migut.O00402 Erythranthe guttata HOM05D000023 ORTHO05D000014 5.8e-06 55.5 100 39.0
HanXRQChr05g0144091 Helianthus annuus HOM05D000023 ORTHO05D000014 5.8e-06 55.5 88 34.1
PSO135G0262 Papaver somniferum HOM05D000023 ORTHO05D000014 5.8e-06 55.5 83 32.5
PGR042G0249 Punica granatum HOM05D000023 ORTHO05D000014 5.8e-06 55.5 74 33.8
Ca_02356_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 7.6e-06 55.1 93 38.7
Ciclev10004312m.g Citrus clementina HOM05D000023 ORTHO05D000014 7.6e-06 55.1 60 46.7
Duzib205G1169 Durio zibethinus HOM05D000023 ORTHO05D000014 7.6e-06 55.1 88 30.7
Glyma.09G079100 Glycine max HOM05D000023 ORTHO05D000014 7.6e-06 55.1 93 38.7
Lalb_Chr23g0276071 Lupinus albus HOM05D000023 ORTHO05D000014 7.6e-06 55.1 93 38.7
Nn1g01787 Nelumbo nucifera HOM05D000023 ORTHO05D000014 7.6e-06 55.1 83 31.3
HPP92_002831 Vanilla planifolia HOM05D000023 ORTHO05D000014 7.6e-06 55.1 74 35.1
VMungo1309G1890 Vigna mungo HOM05D000023 ORTHO05D000014 7.6e-06 55.1 89 40.4
Ah.13g069770 Amaranthus hybridus HOM05D000023 ORTHO05D000014 9.9e-06 54.7 88 30.7
arahy.Tifrunner.gnm1.ann1.L964KV Arachis hypogaea HOM05D000023 ORTHO05D000014 9.9e-06 54.7 104 28.8
CSS0034207 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.9e-06 54.7 83 37.3
HanXRQChr17g0565901 Helianthus annuus HOM05D000023 ORTHO05D000014 9.9e-06 54.7 60 48.3
Lj6g0007513 Lotus japonicus HOM05D000023 ORTHO05D000014 9.9e-06 54.7 93 37.6
MBI07_g11399_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 9.9e-06 54.7 94 31.9
SGA_v2.0_scaffold192G40592 Striga asiatica HOM05D000023 ORTHO05D000014 9.9e-06 54.7 75 33.3
GSVIVG01028726001 Vitis vinifera HOM05D000023 ORTHO05D000014 9.9e-06 54.7 85 31.8


User provided reference genes

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