Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31162 Sequoiadendron giganteum HOM05D004294 ORTHO05D004899 8.4e-66 253.4 120 100.0
Nn6g34994 Nelumbo nucifera HOM05D004294 ORTHO05D004899 1.2e-19 100.1 63 69.8
PSO541G2071 Papaver somniferum HOM05D004294 ORTHO05D004899 7.7e-19 97.4 69 60.9
TAR629G2021 Trochodendron aralioides HOM05D004294 ORTHO05D004899 7.7e-19 97.4 100 47.0
CSS0014990 Camellia sinensis var. sinensis HOM05D004294 ORTHO05D004899 1.0e-18 97.1 107 44.9
PSO675G3209 Papaver somniferum HOM05D004294 ORTHO05D004899 1.3e-18 96.7 69 60.9
Actinidia15750 Actinidia chinensis HOM05D004294 ORTHO05D004899 1.7e-18 96.3 87 50.6
Dinv43581 Davidia involucrata HOM05D004294 ORTHO05D004899 2.9e-18 95.5 102 43.1
Rhsim08G0211800 Rhododendron simsii HOM05D004294 ORTHO05D004899 2.9e-18 95.5 101 45.5
Hma1.2p1_1440F.1_g283530 Hydrangea macrophylla HOM05D004294 ORTHO05D004899 3.8e-18 95.1 87 50.6
Hma1.2p1_0973F.1_g243000 Hydrangea macrophylla HOM05D004294 ORTHO05D004899 6.5e-18 94.4 87 49.4
vmacro19009 Vaccinium macrocarpon HOM05D004294 ORTHO05D004899 6.5e-18 94.4 107 43.9
CANSAT35G1700 Cannabis sativa HOM05D004294 ORTHO05D004899 8.5e-18 94.0 87 51.7
TAR371G1121 Trochodendron aralioides HOM05D004294 ORTHO05D004899 1.1e-17 93.6 69 59.4
PSO782G1693 Papaver somniferum HOM05D004294 ORTHO05D004899 1.9e-17 92.8 69 58.0
PSO063G7341 Papaver somniferum HOM05D004294 ORTHO05D004899 2.5e-17 92.4 69 58.0
Pp3c4_15230 Physcomitrium patens HOM05D004294 ORTHO05D004899 2.5e-17 92.4 63 63.5
Nitab4.5_0006873g0030 Nicotiana tabacum HOM05D004294 ORTHO05D004899 5.5e-17 91.3 67 61.2
TWI75G0011 Tripterygium wilfordii HOM05D004294 ORTHO05D004899 5.5e-17 91.3 87 48.3
CDE12G0039 Ceratophyllum demersum HOM05D004294 ORTHO05D004899 1.2e-16 90.1 69 56.5
Hund09105 Selenicereus undatus HOM05D004294 ORTHO05D004899 1.2e-16 90.1 69 56.5
Thecc.04G104900 Theobroma cacao HOM05D004294 ORTHO05D004899 1.2e-16 90.1 102 43.1
HPP92_020692 Vanilla planifolia HOM05D004294 ORTHO05D004899 1.2e-16 90.1 63 60.3
Gohir.A08G156800 Gossypium hirsutum HOM05D004294 ORTHO05D004899 1.6e-16 89.7 87 49.4
Medtr2g022850 Medicago truncatula HOM05D004294 ORTHO05D004899 1.6e-16 89.7 88 47.7
HanXRQChr17g0545891 Helianthus annuus HOM05D004294 ORTHO05D004899 2.1e-16 89.4 63 61.9
Lsat_1_v5_gn_4_36140 Lactuca sativa HOM05D004294 ORTHO05D004899 2.1e-16 89.4 87 50.6
MSTRG.20657 Avicennia marina HOM05D004294 ORTHO05D004899 4.7e-16 88.2 63 60.3
Gohir.D08G177200 Gossypium hirsutum HOM05D004294 ORTHO05D004899 4.7e-16 88.2 87 48.3
Gorai.004G185600 Gossypium raimondii HOM05D004294 ORTHO05D004899 6.1e-16 87.8 87 48.3
Cc02_g25750 Coffea canephora HOM05D004294 ORTHO05D004899 8.0e-16 87.4 100 42.0
Duzib138G0823 Durio zibethinus HOM05D004294 ORTHO05D004899 8.0e-16 87.4 87 48.3
Peaxi162Scf00102g01053 Petunia axillaris HOM05D004294 ORTHO05D004899 8.0e-16 87.4 63 60.3
SGA_v2.0_scaffold45G17247 Striga asiatica HOM05D004294 ORTHO05D004899 8.0e-16 87.4 63 60.3
DCAR_029527 Daucus carota HOM05D004294 ORTHO05D004899 1.0e-15 87.0 63 57.1
ECA234G1071 Erigeron canadensis HOM05D004294 ORTHO05D004899 1.0e-15 87.0 87 48.3
Lalb_Chr14g0374351 Lupinus albus HOM05D004294 ORTHO05D004899 1.4e-15 86.7 69 62.3
Psat2g182760 Pisum sativum HOM05D004294 ORTHO05D004899 1.8e-15 86.3 87 46.0
TPR.G32380 Trifolium pratense HOM05D004294 ORTHO05D004899 1.8e-15 86.3 87 46.0
Ah.09g230610 Amaranthus hybridus HOM05D004294 ORTHO05D004899 2.3e-15 85.9 69 55.1
Cfa022163 Carpinus fangiana HOM05D004294 ORTHO05D004899 3.0e-15 85.5 63 58.7
Haze_02916 Corylus avellana HOM05D004294 ORTHO05D004899 3.0e-15 85.5 63 58.7
Eucgr.E01714 Eucalyptus grandis HOM05D004294 ORTHO05D004899 3.0e-15 85.5 63 60.3
Lsat_1_v5_gn_3_35920 Lactuca sativa HOM05D004294 ORTHO05D004899 3.0e-15 85.5 63 61.9
TPR.G23032 Trifolium pratense HOM05D004294 ORTHO05D004899 3.0e-15 85.5 64 56.2
Ciclev10022425m.g Citrus clementina HOM05D004294 ORTHO05D004899 4.0e-15 85.1 72 54.2
HanXRQChr10g0302581 Helianthus annuus HOM05D004294 ORTHO05D004899 4.0e-15 85.1 63 58.7
Solyc01g150146.1 Solanum lycopersicum HOM05D004294 ORTHO05D004899 4.0e-15 85.1 63 61.9
Medtr2g084540 Medicago truncatula HOM05D004294 ORTHO05D004899 5.2e-15 84.7 87 46.0
Nitab4.5_0004088g0110 Nicotiana tabacum HOM05D004294 ORTHO05D004899 5.2e-15 84.7 63 58.7
Potri.002G134800 Populus trichocarpa HOM05D004294 ORTHO05D004899 5.2e-15 84.7 69 53.6
PGSC0003DMG400001711 Solanum tuberosum HOM05D004294 ORTHO05D004899 5.2e-15 84.7 63 61.9
VMungo0540G0738 Vigna mungo HOM05D004294 ORTHO05D004899 5.2e-15 84.7 87 46.0
Migut.K00778 Erythranthe guttata HOM05D004294 ORTHO05D004899 6.8e-15 84.3 63 57.1
Phvul.006G166400 Phaseolus vulgaris HOM05D004294 ORTHO05D004899 6.8e-15 84.3 87 44.8
Sabra02G0105000 Salix brachista HOM05D004294 ORTHO05D004899 8.8e-15 84.0 63 58.7
SalBow5G4501 Salvia bowleyana HOM05D004294 ORTHO05D004899 8.8e-15 84.0 63 57.1
Atru.chr5.64 Acer truncatum HOM05D004294 ORTHO05D004899 1.2e-14 83.6 69 55.1
CAN.G756.9 Capsicum annuum HOM05D004294 ORTHO05D004899 1.2e-14 83.6 63 60.3
AUR62021410 Chenopodium quinoa HOM05D004294 ORTHO05D004899 1.2e-14 83.6 69 53.6
Sopen01g035370 Solanum pennellii HOM05D004294 ORTHO05D004899 1.2e-14 83.6 63 60.3
GSVIVG01037228001 Vitis vinifera HOM05D004294 ORTHO05D004899 1.2e-14 83.6 100 42.0
ATR0626G354 Amborella trichopoda HOM05D004294 ORTHO05D004899 1.5e-14 83.2 88 43.2
ECA234G1894 Erigeron canadensis HOM05D004294 ORTHO05D004899 1.5e-14 83.2 63 58.7
Lj3g0019907 Lotus japonicus HOM05D004294 ORTHO05D004899 1.5e-14 83.2 63 57.1
Ca_01696_v3 Cicer arietinum L. HOM05D004294 ORTHO05D004899 2.0e-14 82.8 69 52.2
Glyma.13G219700 Glycine max HOM05D004294 ORTHO05D004899 2.6e-14 82.4 87 44.8
Glyma.15G092700 Glycine max HOM05D004294 ORTHO05D004899 2.6e-14 82.4 87 44.8
AUR62021407 Chenopodium quinoa HOM05D004294 ORTHO05D004899 3.4e-14 82.0 69 52.2
Zm00001eb097750 Zea mays HOM05D004294 ORTHO05D004899 3.4e-14 82.0 100 43.0
Atru.chr5.34 Acer truncatum HOM05D004294 ORTHO05D004899 4.4e-14 81.6 69 53.6
Aqoxy3G02531 Aquilegia oxysepala HOM05D004294 ORTHO05D004899 4.4e-14 81.6 60 55.0
AUR62010895 Chenopodium quinoa HOM05D004294 ORTHO05D004899 4.4e-14 81.6 69 52.2
Sed0004229 Sechium edule HOM05D004294 ORTHO05D004899 4.4e-14 81.6 87 43.7
SMO232G0013 Selaginella moellendorffii HOM05D004294 ORTHO05D004899 5.7e-14 81.3 63 57.1
SMO241G0031 Selaginella moellendorffii HOM05D004294 ORTHO05D004899 5.7e-14 81.3 64 56.2
Manes.02G122400 Manihot esculenta HOM05D004294 ORTHO05D004899 9.8e-14 80.5 63 55.6
MELO3C031600.2 Cucumis melo HOM05D004294 ORTHO05D004899 1.7e-13 79.7 91 41.8
CiPaw.13G021200 Carya illinoinensis HOM05D004294 ORTHO05D004899 2.2e-13 79.3 63 55.6
FvH4_5g29260 Fragaria vesca HOM05D004294 ORTHO05D004899 2.8e-13 79.0 63 52.4
FvH4_7g08700 Fragaria vesca HOM05D004294 ORTHO05D004899 2.8e-13 79.0 100 39.0
FAN06G3965 Fragaria x ananassa HOM05D004294 ORTHO05D004899 2.8e-13 79.0 100 39.0
Lj3g0025421 Lotus japonicus HOM05D004294 ORTHO05D004899 2.8e-13 79.0 63 54.0
QL04p025854 Quercus lobata HOM05D004294 ORTHO05D004899 2.8e-13 79.0 69 49.3
FAN03G1356 Fragaria x ananassa HOM05D004294 ORTHO05D004899 3.7e-13 78.6 100 39.0
CiPaw.14G015600 Carya illinoinensis HOM05D004294 ORTHO05D004899 4.8e-13 78.2 63 52.4
MD07G1088000 Malus domestica HOM05D004294 ORTHO05D004899 4.8e-13 78.2 63 52.4
Potri.014G043400 Populus trichocarpa HOM05D004294 ORTHO05D004899 4.8e-13 78.2 63 54.0
unitig_0.g1581 Utricularia gibba HOM05D002708 ORTHO05D003516 4.8e-13 78.2 63 52.4
MD02G1225800 Malus domestica HOM05D004294 ORTHO05D004899 6.3e-13 77.8 63 52.4
Mapoly0030s0033 Marchantia polymorpha HOM05D004294 ORTHO05D004899 6.3e-13 77.8 63 52.4
Sed0018514 Sechium edule HOM05D004294 ORTHO05D004899 6.3e-13 77.8 84 44.0
arahy.Tifrunner.gnm1.ann1.ZAL8K4 Arachis hypogaea HOM05D004294 ORTHO05D004899 8.3e-13 77.4 59 59.3
RcHm_v2.0_Chr5g0055501 Rosa chinensis HOM05D004294 ORTHO05D004899 8.3e-13 77.4 63 52.4
FAN18G1057 Fragaria x ananassa HOM05D004294 ORTHO05D004899 1.1e-12 77.0 63 50.8
Prupe.2G114700 Prunus persica HOM05D004294 ORTHO05D004899 1.1e-12 77.0 63 50.8
Thhalv10017327m.g Eutrema salsugineum HOM05D004294 ORTHO05D004899 1.4e-12 76.6 63 54.0
RcHm_v2.0_Chr1g0343921 Rosa chinensis HOM05D004294 ORTHO05D004899 1.4e-12 76.6 63 50.8
AL4G36820 Arabidopsis lyrata HOM05D004294 ORTHO05D004899 1.8e-12 76.3 63 54.0
arahy.Tifrunner.gnm1.ann1.E5WW1G Arachis hypogaea HOM05D005360 ORTHO05D004899 1.8e-12 76.3 59 57.6
AT2G39445 Arabidopsis thaliana HOM05D004294 ORTHO05D004899 2.4e-12 75.9 63 54.0
Aa31LG5G20160 Aethionema arabicum HOM05D004294 ORTHO05D004899 3.1e-12 75.5 63 52.4
Cpa.g.sc52.62 Carica papaya HOM05D004294 ORTHO05D004899 3.1e-12 75.5 61 57.4
CBR_g12382 Chara braunii HOM05D004294 ORTHO05D004899 3.1e-12 75.5 63 52.4
SalBow4G1179 Salvia bowleyana HOM05D004294 ORTHO05D004899 3.1e-12 75.5 65 50.8
Carub.0004s2151 Capsella rubella HOM05D004294 ORTHO05D004899 4.1e-12 75.1 63 54.0
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 7.0e-12 74.3 63 52.4
Gohir.D08G177066 Gossypium hirsutum HOM05D004294 ORTHO05D004899 1.6e-11 73.2 112 40.2
GSVIVG01026772001 Vitis vinifera HOM05D004294 ORTHO05D004899 1.6e-11 73.2 63 54.0
BcaB02g09119 Brassica carinata HOM05D004294 ORTHO05D004899 2.7e-11 72.4 63 52.4
BcaB02g09120 Brassica carinata HOM05D004294 ORTHO05D004899 2.7e-11 72.4 63 52.4
BcaC02g12072 Brassica carinata HOM05D004294 ORTHO05D004899 3.5e-11 72.0 63 52.4
A05p06950 Brassica napus HOM05D004294 ORTHO05D004899 3.5e-11 72.0 63 52.4
C04p08280 Brassica napus HOM05D004294 ORTHO05D004899 3.5e-11 72.0 63 52.4
BolC4t22431H Brassica oleracea HOM05D004294 ORTHO05D004899 3.5e-11 72.0 63 52.4
BraA05t19659Z Brassica rapa HOM05D004294 ORTHO05D004899 3.5e-11 72.0 63 52.4
ClCG05G002810 Citrullus lanatus HOM05D004294 ORTHO05D004899 4.5e-11 71.6 87 40.2
Sp4g08170 Schrenkiella parvula HOM05D004294 ORTHO05D004899 4.5e-11 71.6 63 52.4
AL2G15030 Arabidopsis lyrata HOM05D004294 ORTHO05D004899 1.0e-10 70.5 64 51.6
CARHR134310 Cardamine hirsuta HOM05D004294 ORTHO05D004899 1.0e-10 70.5 63 49.2
CsaV3_3G010340 Cucumis sativus L. HOM05D004294 ORTHO05D004899 1.0e-10 70.5 63 49.2
AT1G61280 Arabidopsis thaliana HOM05D004294 ORTHO05D004899 1.3e-10 70.1 63 47.6
CARHR051330 Cardamine hirsuta HOM05D004294 ORTHO05D004899 1.7e-10 69.7 67 49.3
Carub.0004s0710 Capsella rubella HOM05D004294 ORTHO05D004899 3.8e-10 68.6 63 50.8
AagrBONN_evm.TU.Sc2ySwM_368.1700 Anthoceros agrestis HOM05D004294 ORTHO05D004899 8.6e-10 67.4 69 40.6
Thhalv10024054m.g Eutrema salsugineum HOM05D004294 ORTHO05D004899 8.6e-10 67.4 63 44.4
MELO3C031598.2 Cucumis melo HOM05D004294 ORTHO05D004899 1.5e-09 66.6 63 50.8
Sp4g21750 Schrenkiella parvula HOM05D004294 ORTHO05D004899 1.5e-09 66.6 63 49.2
BcaB06g29086 Brassica carinata HOM05D004294 ORTHO05D004899 1.9e-09 66.2 63 46.0
A04p30460 Brassica napus HOM05D004294 ORTHO05D004899 1.9e-09 66.2 63 49.2
C04p67330 Brassica napus HOM05D004294 ORTHO05D004899 1.9e-09 66.2 63 49.2
BolC4t28228H Brassica oleracea HOM05D004294 ORTHO05D004899 1.9e-09 66.2 63 49.2
BraA04t18462Z Brassica rapa HOM05D004294 ORTHO05D004899 1.9e-09 66.2 63 49.2
Carub.0002s0388 Capsella rubella HOM05D004294 ORTHO05D004899 9.5e-09 63.9 67 46.3
Os10g0569100 Oryza sativa ssp. japonica HOM05D004294 ORTHO05D004899 1.0e-07 60.5 61 47.5
AagrBONN_evm.TU.Sc2ySwM_362.275 Anthoceros agrestis HOM05D004294 ORTHO05D004899 2.3e-07 59.3 69 36.2
MELO3C031599.2 Cucumis melo HOM05D004294 ORTHO05D004899 3.0e-07 58.9 38 65.8
MSTRG.4966 Avicennia marina HOM05D004294 ORTHO05D004899 1.2e-06 57.0 91 35.2
Migut.N01709 Erythranthe guttata HOM05D004294 ORTHO05D004899 4.4e-06 55.1 62 41.9


User provided reference genes

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