Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21711 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 6.2e-180 634.0 323 100.0
SEGI_31107 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 6.2e-180 634.0 323 100.0
SEGI_26499 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 6.9e-139 497.7 301 87.4
SEGI_40661 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 8.5e-121 437.6 332 70.8
SEGI_28836 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 6.3e-100 368.2 330 62.7
SEGI_12844 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 2.7e-98 362.8 267 70.0
SEGI_16200 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 8.5e-97 357.8 358 57.5
SEGI_09398 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.2e-90 337.4 285 66.3
SEGI_00912 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 6.2e-63 245.4 596 33.9
SEGI_13088 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 3.4e-61 239.6 345 42.3
SEGI_23434 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.8e-54 217.2 306 42.5
SEGI_23568 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.8e-54 217.2 306 42.5
SEGI_05727 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 2.4e-54 216.9 349 41.0
SEGI_32879 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 2.6e-53 213.4 257 45.9
SEGI_30078 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.3e-52 211.1 342 40.6
SEGI_29917 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 4.3e-48 196.1 257 45.1
SEGI_04365 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.6e-47 194.1 334 39.2
SEGI_27533 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 3.6e-39 166.4 344 36.3
SEGI_33369 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 3.2e-27 126.7 241 36.9
SEGI_37891 Sequoiadendron giganteum HOM05D010622 ORTHO05D011909 1.2e-18 98.2 219 37.4
SEGI_24108 Sequoiadendron giganteum HOM05D020534 ORTHO05D023143 1.6e-10 71.2 140 32.9
Gorai.009G031900 Gossypium raimondii HOM05D004059 ORTHO05D004591 4.6e-10 69.7 262 26.7
vmacro17254 Vaccinium macrocarpon HOM05D004059 ORTHO05D004591 6.1e-10 69.3 147 36.7
Gohir.D05G031700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 7.9e-10 68.9 262 26.3
MD15G1208900 Malus domestica HOM05D004059 ORTHO05D004591 1.8e-09 67.8 263 26.6
Gohir.A05G030300 Gossypium hirsutum HOM05D004059 ORTHO05D004591 5.1e-09 66.2 262 26.0
Peaxi162Scf00028g00036 Petunia axillaris HOM05D004059 ORTHO05D004591 5.1e-09 66.2 67 52.2
Rhsim05G0018600 Rhododendron simsii HOM05D004059 ORTHO05D004591 5.1e-09 66.2 69 50.7
TAR636G3314 Trochodendron aralioides HOM05D004059 ORTHO05D004591 5.1e-09 66.2 168 35.7
Dinv36776 Davidia involucrata HOM05D004059 ORTHO05D004591 6.7e-09 65.9 141 34.8
Peaxi162Scf00498g00042 Petunia axillaris HOM05D004059 ORTHO05D004591 8.8e-09 65.5 192 30.2
CAN.G52.7 Capsicum annuum HOM05D004059 ORTHO05D004591 1.1e-08 65.1 138 34.1
DCAR_011967 Daucus carota HOM05D004059 ORTHO05D004591 1.1e-08 65.1 147 35.4
Dinv42329 Davidia involucrata HOM05D004059 ORTHO05D004591 1.1e-08 65.1 64 51.6
SGA_v2.0_scaffold62G21623 Striga asiatica HOM05D004059 ORTHO05D004591 1.1e-08 65.1 150 31.3
GSVIVG01015189001 Vitis vinifera HOM05D004059 ORTHO05D004591 1.1e-08 65.1 87 44.8
Actinidia29906 Actinidia chinensis HOM05D004059 ORTHO05D004591 1.5e-08 64.7 75 48.0
ATR0749G078 Amborella trichopoda HOM05D004059 ORTHO05D004591 1.5e-08 64.7 139 35.3
QL02p062365 Quercus lobata HOM05D004059 ORTHO05D004591 1.5e-08 64.7 140 35.0
CANSAT56G2242 Cannabis sativa HOM05D004059 ORTHO05D004591 2.5e-08 63.9 64 51.6
MD02G1081600 Malus domestica HOM05D004059 ORTHO05D004591 2.5e-08 63.9 229 28.8
CAN.G3656.1 Capsicum annuum HOM05D004059 ORTHO05D004591 4.3e-08 63.2 100 41.0
Peaxi162Scf00498g00054 Petunia axillaris HOM05D004059 ORTHO05D004591 4.3e-08 63.2 81 44.4
PGSC0003DMG400000335 Solanum tuberosum HOM05D000597 ORTHO05D004591 4.3e-08 63.2 72 51.4
TAR624G0558 Trochodendron aralioides HOM05D004059 ORTHO05D004591 4.3e-08 63.2 65 49.2
Cc06_g11520 Coffea canephora HOM05D004059 ORTHO05D004591 5.7e-08 62.8 177 30.5
Gohir.A07G011900 Gossypium hirsutum HOM05D004059 ORTHO05D004591 5.7e-08 62.8 265 25.7
Sopen07g018910 Solanum pennellii HOM05D004059 ORTHO05D004591 5.7e-08 62.8 225 25.3
PGSC0003DMG400022043 Solanum tuberosum HOM05D004059 ORTHO05D004591 5.7e-08 62.8 111 37.8
CSS0003764 Camellia sinensis var. sinensis HOM05D004059 ORTHO05D004591 7.4e-08 62.4 80 50.0
Lj7A677T52 Lonicera japonica HOM05D004059 ORTHO05D004591 7.4e-08 62.4 97 39.2
MBI01_g09949_MAGBIO Magnolia biondii HOM05D004059 ORTHO05D004591 7.4e-08 62.4 91 42.9
CAN.G1583.1 Capsicum annuum HOM05D000597 ORTHO05D004591 9.7e-08 62.0 79 48.1
CDE04G0617 Ceratophyllum demersum HOM05D004059 ORTHO05D004591 9.7e-08 62.0 135 34.1
SalBow6G2434 Salvia bowleyana HOM05D004059 ORTHO05D004591 9.7e-08 62.0 223 29.6
Manes.16G101000 Manihot esculenta HOM05D004059 ORTHO05D004591 1.3e-07 61.6 117 32.5
Sabra06G0117700 Salix brachista HOM05D004059 ORTHO05D004591 1.3e-07 61.6 99 36.4
Zm00001eb120960 Zea mays HOM05D004059 ORTHO05D004591 1.3e-07 61.6 125 34.4
Duzib187G0197 Durio zibethinus HOM05D004059 ORTHO05D004591 1.7e-07 61.2 263 25.9
Lsat_1_v5_gn_7_36701 Lactuca sativa HOM05D004059 ORTHO05D004591 1.7e-07 61.2 209 27.8
Nitab4.5_0002593g0060 Nicotiana tabacum HOM05D004059 ORTHO05D004591 1.7e-07 61.2 115 37.4
SEGI_08279 Sequoiadendron giganteum HOM05D012667 ORTHO05D011909 1.7e-07 61.2 233 28.8
CiPaw.03G214200 Carya illinoinensis HOM05D004059 ORTHO05D004591 2.2e-07 60.8 145 33.1
MELO3C015488.2 Cucumis melo HOM05D004059 ORTHO05D004591 2.2e-07 60.8 75 41.3
CsaV3_1G040580 Cucumis sativus L. HOM05D004059 ORTHO05D004591 2.2e-07 60.8 75 41.3
FvH4_1g07710 Fragaria vesca HOM05D004059 ORTHO05D004591 2.2e-07 60.8 141 33.3
Hma1.2p1_1838F.1_g304870 Hydrangea macrophylla HOM05D004059 ORTHO05D004591 2.2e-07 60.8 83 41.0
Nitab4.5_0006053g0020 Nicotiana tabacum HOM05D004059 ORTHO05D004591 2.2e-07 60.8 115 36.5
Zm00001eb240050 Zea mays HOM05D004059 ORTHO05D004591 2.2e-07 60.8 80 41.2
ClCG03G015470 Citrullus lanatus HOM05D004059 ORTHO05D004591 2.8e-07 60.5 163 29.4
Zm00001eb160210 Zea mays HOM05D004059 ORTHO05D004591 2.8e-07 60.5 66 47.0
Atru.chr7.1612 Acer truncatum HOM05D004059 ORTHO05D004591 3.7e-07 60.1 89 38.2
Duzib168G0233 Durio zibethinus HOM05D004059 ORTHO05D004591 3.7e-07 60.1 249 26.5
FAN23G2659 Fragaria x ananassa HOM05D004059 ORTHO05D004591 3.7e-07 60.1 146 32.9
FAN26G1668 Fragaria x ananassa HOM05D004059 ORTHO05D004591 3.7e-07 60.1 146 32.2
Nn8g38830 Nelumbo nucifera HOM05D004059 ORTHO05D004591 3.7e-07 60.1 189 29.1
RcHm_v2.0_Chr2g0093571 Rosa chinensis HOM05D004059 ORTHO05D004591 3.7e-07 60.1 122 35.2
Hund25946 Selenicereus undatus HOM05D004059 ORTHO05D004591 3.7e-07 60.1 117 33.3
Aqoxy7G04020 Aquilegia oxysepala HOM05D004059 ORTHO05D004591 4.8e-07 59.7 76 44.7
CSS0005796 Camellia sinensis var. sinensis HOM05D004059 ORTHO05D004591 4.8e-07 59.7 207 30.0
FAN26G3139 Fragaria x ananassa HOM05D004059 ORTHO05D004591 4.8e-07 59.7 146 32.2
CDE06G2535 Ceratophyllum demersum HOM05D004059 ORTHO05D004591 6.3e-07 59.3 138 36.2
COL.COLO4_18190 Corchorus olitorius HOM05D004059 ORTHO05D004591 6.3e-07 59.3 146 28.1
Gorai.001G012400 Gossypium raimondii HOM05D004059 ORTHO05D004591 6.3e-07 59.3 145 30.3
Prupe.7G207500 Prunus persica HOM05D004059 ORTHO05D004591 6.3e-07 59.3 218 29.8
SEGI_22426 Sequoiadendron giganteum HOM05D012667 ORTHO05D011909 6.3e-07 59.3 239 25.1
AUR62033947 Chenopodium quinoa HOM05D004059 ORTHO05D004591 8.2e-07 58.9 145 29.0
vmacro06298 Vaccinium macrocarpon HOM05D004059 ORTHO05D004591 8.2e-07 58.9 149 33.6
CiPaw.04G148500 Carya illinoinensis HOM05D004059 ORTHO05D004591 1.1e-06 58.5 227 25.6
Ciclev10007937m.g Citrus clementina HOM05D004059 ORTHO05D004591 1.1e-06 58.5 180 28.3
Gohir.D07G011700 Gossypium hirsutum HOM05D004059 ORTHO05D004591 1.1e-06 58.5 265 25.7
Potri.006G148800 Populus trichocarpa HOM05D004059 ORTHO05D004591 1.1e-06 58.5 160 31.2
Haze_25925 Corylus avellana HOM05D004059 ORTHO05D004591 1.4e-06 58.2 136 34.6
FAN28G1400 Fragaria x ananassa HOM05D004059 ORTHO05D004591 1.4e-06 58.2 146 32.2
Lj4C294G8 Lonicera japonica HOM05D004059 ORTHO05D004591 1.4e-06 58.2 91 40.7
Solyc07g039570.3 Solanum lycopersicum HOM05D004059 ORTHO05D004591 1.4e-06 58.2 74 47.3
Actinidia38451 Actinidia chinensis HOM05D004059 ORTHO05D004591 1.8e-06 57.8 71 46.5
AUR62029052 Chenopodium quinoa HOM05D004059 ORTHO05D004591 1.8e-06 57.8 218 23.9
ECA240G1274 Erigeron canadensis HOM05D004059 ORTHO05D004591 1.8e-06 57.8 111 33.3
FAN19G2456 Fragaria x ananassa HOM05D004059 ORTHO05D004591 1.8e-06 57.8 141 32.6
Lj4C294T9 Lonicera japonica HOM05D004059 ORTHO05D004591 1.8e-06 57.8 91 39.6
TWI34G0199 Tripterygium wilfordii HOM05D004059 ORTHO05D004591 1.8e-06 57.8 109 31.2
Zm00001eb337860 Zea mays HOM05D004059 ORTHO05D004591 1.8e-06 57.8 70 42.9
MELO3C004627.2 Cucumis melo HOM05D004059 ORTHO05D004591 2.4e-06 57.4 65 50.8
Lalb_Chr08g0232291 Lupinus albus HOM05D004059 ORTHO05D004591 3.1e-06 57.0 165 32.1
Medtr2g039620 Medicago truncatula HOM05D004059 ORTHO05D004591 3.1e-06 57.0 143 32.2
TWI15G0365 Tripterygium wilfordii HOM05D001604 ORTHO05D001432 3.1e-06 57.0 143 35.7
Mapoly0028s0062 Marchantia polymorpha HOM05D024145 ORTHO05D022909 4.1e-06 56.6 79 43.0
Oeu017604.1 Olea europaea HOM05D004059 ORTHO05D004591 4.1e-06 56.6 211 28.4
Sed0008144 Sechium edule HOM05D004059 ORTHO05D004591 4.1e-06 56.6 86 37.2
ClCG11G001730 Citrullus lanatus HOM05D004059 ORTHO05D004591 5.3e-06 56.2 73 45.2
Nn6g35501 Nelumbo nucifera HOM05D004059 ORTHO05D004591 5.3e-06 56.2 156 32.7
Ca_17528_v3 Cicer arietinum L. HOM05D001604 ORTHO05D001432 6.9e-06 55.8 97 34.0
Glyma.09G064200 Glycine max HOM05D004059 ORTHO05D004591 6.9e-06 55.8 152 32.9
arahy.Tifrunner.gnm1.ann1.H4FASW Arachis hypogaea HOM05D004059 ORTHO05D004591 9.1e-06 55.5 191 29.3
Cfa003070 Carpinus fangiana HOM05D004059 ORTHO05D004591 9.1e-06 55.5 249 26.1
CsaV3_2G001440 Cucumis sativus L. HOM05D004059 ORTHO05D004591 9.1e-06 55.5 65 49.2
Migut.J00583 Erythranthe guttata HOM05D004059 ORTHO05D004591 9.1e-06 55.5 87 39.1
Sp6g18670 Schrenkiella parvula HOM05D004059 ORTHO05D004591 9.1e-06 55.5 65 44.6


User provided reference genes

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