Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 5.6e-161 570.9 280 100.0
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 5.0e-61 238.8 279 48.0
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 1.3e-56 224.2 269 46.1
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 4.9e-56 222.2 266 45.9
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 4.1e-55 219.2 261 45.6
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 7.0e-55 218.4 260 46.5
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 1.6e-54 217.2 261 44.4
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 4.5e-54 215.7 260 44.6
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 7.7e-54 214.9 266 42.9
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 2.3e-53 213.4 257 46.7
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 2.3e-53 213.4 271 42.8
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 2.9e-53 213.0 271 43.2
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 5.0e-53 212.2 257 46.3
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 8.6e-53 211.5 258 43.4
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 1.1e-52 211.1 271 43.5
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 1.1e-52 211.1 261 44.8
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.1e-52 211.1 272 43.4
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 9.5e-52 208.0 260 43.8
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 1.2e-51 207.6 265 43.0
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 1.6e-51 207.2 263 42.2
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 3.6e-51 206.1 275 42.5
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 4.7e-51 205.7 267 43.4
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 4.7e-51 205.7 267 43.4
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 1.4e-50 204.1 250 46.4
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 4.0e-50 202.6 268 42.9
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 5.2e-50 202.2 267 43.1
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 8.9e-50 201.4 267 42.3
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 2.6e-49 199.9 287 41.8
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 3.4e-49 199.5 266 43.2
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 5.7e-49 198.7 262 43.1
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 2.2e-48 196.8 262 43.9
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 2.9e-48 196.4 259 42.9
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 4.9e-48 195.7 269 41.3
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 1.8e-47 193.7 257 45.5
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 7.0e-47 191.8 264 43.9
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 1.2e-46 191.0 244 43.0
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 1.6e-46 190.7 291 42.3
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 4.6e-46 189.1 261 44.8
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 5.9e-46 188.7 264 41.7
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.7e-45 187.2 258 43.8
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 2.3e-45 186.8 254 42.9
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 5.0e-45 185.7 251 42.2
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 8.6e-45 184.9 244 43.9
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 1.1e-44 184.5 253 43.1
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 1.9e-44 183.7 267 42.3
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 3.3e-44 183.0 258 43.0
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 3.3e-44 183.0 259 44.0
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 3.3e-44 183.0 254 44.1
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 5.6e-44 182.2 256 42.6
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 5.6e-44 182.2 242 46.3
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 2.1e-43 180.3 258 43.0
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 3.6e-43 179.5 256 42.6
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 4.7e-43 179.1 255 42.0
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 6.1e-43 178.7 261 43.7
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 1.0e-42 177.9 258 43.0
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 1.0e-42 177.9 257 44.0
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 1.0e-42 177.9 244 44.3
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 2.3e-42 176.8 244 43.4
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 3.1e-42 176.4 247 41.3
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 4.0e-42 176.0 254 40.9
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 2.6e-41 173.3 246 43.5
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 3.4e-41 172.9 330 35.5
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 3.4e-41 172.9 246 43.9
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 4.4e-41 172.6 242 43.0
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 5.8e-41 172.2 257 42.4
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 5.8e-41 172.2 276 37.3
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 7.5e-41 171.8 260 42.7
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 7.5e-41 171.8 257 42.0
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 9.8e-41 171.4 257 42.4
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 9.8e-41 171.4 257 42.4
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 1.3e-40 171.0 248 40.3
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 1.3e-40 171.0 255 42.0
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 1.1e-39 167.9 260 43.1
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.1e-39 167.9 259 40.5
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 1.4e-39 167.5 245 40.4
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 1.4e-39 167.5 247 42.5
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 3.2e-39 166.4 259 40.5
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 7.0e-39 165.2 242 40.9
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 2.0e-38 163.7 221 43.4
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 1.7e-37 160.6 242 41.7
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 2.5e-36 156.8 244 40.2
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 1.2e-35 154.5 246 39.8
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 3.6e-35 152.9 250 40.0
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 5.2e-34 149.1 244 38.9
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 5.2e-34 149.1 244 38.9
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 6.8e-34 148.7 244 38.9
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 4.4e-33 146.0 228 40.8
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 4.4e-33 146.0 244 38.1
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 1.7e-32 144.1 244 38.1
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.2e-27 127.9 193 40.4
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 1.4e-26 124.4 186 37.1
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 4.0e-26 122.9 118 53.4
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 1.5e-25 120.9 250 34.4
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.5e-25 120.9 118 53.4
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 4.1e-23 112.8 104 56.7
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 2.3e-21 107.1 118 44.9
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 7.3e-20 102.1 114 49.1
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 4.0e-18 96.3 96 54.2
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 6.8e-18 95.5 151 39.1
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 1.5e-17 94.4 210 32.4
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 7.8e-14 82.0 265 25.3
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 2.1e-11 73.9 99 42.4
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.6e-11 73.2 67 56.7
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 2.4e-10 70.5 79 44.3


User provided reference genes

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