Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 4.0e-287 990.7 501 100.0
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 2.0e-225 785.8 398 100.0
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 1.8e-93 347.4 507 42.2
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 1.7e-91 340.9 495 43.6
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 2.9e-91 340.1 508 42.3
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 2.0e-89 334.0 513 39.8
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 4.6e-89 332.8 516 41.1
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 5.0e-88 329.3 517 40.8
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 9.5e-87 325.1 507 41.0
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 2.1e-86 323.9 522 39.5
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 2.1e-86 323.9 518 39.8
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 3.6e-86 323.2 510 40.0
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 3.6e-86 323.2 512 37.9
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 4.7e-86 322.8 519 40.3
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 8.0e-86 322.0 518 38.2
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 1.1e-85 321.6 515 39.2
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 1.4e-85 321.2 520 39.4
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 2.3e-85 320.5 516 39.5
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 4.0e-85 319.7 521 39.0
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 6.8e-85 318.9 511 38.2
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 8.9e-85 318.5 513 39.0
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 1.2e-84 318.2 511 39.3
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 2.0e-84 317.4 522 38.9
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 1.3e-83 314.7 507 39.8
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 1.3e-83 314.7 518 39.0
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 2.9e-83 313.5 502 38.4
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 2.9e-83 313.5 523 39.2
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 3.7e-83 313.2 513 38.6
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 8.3e-83 312.0 511 37.2
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 1.1e-82 311.6 515 38.6
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 1.9e-82 310.8 511 39.5
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 1.6e-81 307.8 513 39.4
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 1.6e-81 307.8 513 39.4
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 1.6e-81 307.8 518 38.4
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 2.7e-81 307.0 520 38.7
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 4.6e-81 306.2 521 39.5
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 6.0e-81 305.8 515 40.2
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 7.8e-81 305.4 527 38.0
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 1.3e-80 304.7 506 39.7
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 1.7e-80 304.3 507 40.4
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 3.9e-80 303.1 515 38.4
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 5.1e-80 302.8 523 37.9
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 5.1e-80 302.8 511 38.0
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 8.6e-80 302.0 510 37.3
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 8.6e-80 302.0 519 38.0
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 1.5e-79 301.2 516 38.0
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 3.3e-79 300.1 510 37.3
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 5.6e-79 299.3 518 38.8
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 5.6e-79 299.3 525 38.1
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 9.5e-79 298.5 509 39.1
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 1.6e-78 297.7 513 39.2
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 2.1e-78 297.4 509 40.5
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 2.8e-78 297.0 516 38.0
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 2.8e-78 297.0 516 37.6
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 3.6e-78 296.6 520 37.7
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 3.6e-78 296.6 565 34.2
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 6.2e-78 295.8 511 38.2
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 6.8e-77 292.4 514 37.4
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 8.9e-77 292.0 515 37.3
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 1.2e-76 291.6 529 36.5
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 1.7e-75 287.7 576 33.0
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 3.2e-74 283.5 507 35.9
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 5.4e-74 282.7 523 35.6
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 6.0e-73 279.3 516 37.0
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 7.8e-73 278.9 523 36.9
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 1.0e-72 278.5 501 36.7
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 2.3e-72 277.3 514 38.5
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 2.5e-71 273.9 499 38.3
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 3.3e-71 273.5 529 36.3
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 5.6e-71 272.7 387 43.2
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 1.2e-70 271.6 504 38.9
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 2.1e-70 270.8 504 37.5
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 2.8e-70 270.4 524 36.1
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 8.1e-70 268.9 518 35.1
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 1.1e-69 268.5 555 32.6
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 5.8e-68 262.7 521 35.9
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 8.4e-67 258.8 508 36.4
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 5.4e-66 256.1 520 34.6
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 5.4e-66 256.1 406 41.1
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 2.7e-65 253.8 495 36.4
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 4.6e-65 253.1 553 32.7
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 5.1e-64 249.6 569 32.2
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 9.6e-63 245.4 521 35.5
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 1.6e-62 244.6 506 33.8
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 4.8e-62 243.0 524 35.5
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 1.0e-56 225.3 506 34.8
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 2.5e-55 220.7 445 36.6
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 5.3e-53 213.0 116 92.2
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 6.0e-49 199.5 389 36.2
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 1.8e-48 198.0 215 49.3
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 8.1e-46 189.1 525 30.9
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 1.1e-42 178.7 413 32.2
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 3.2e-42 177.2 182 51.1
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 9.0e-37 159.1 418 32.3
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 9.3e-34 149.1 496 28.6
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 6.7e-24 116.3 86 64.0
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 5.9e-20 103.2 247 32.8
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 2.7e-17 94.4 83 50.6
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 4.4e-15 87.0 271 31.7
TAR623G1253 Trochodendron aralioides HOM05D006963 ORTHO05D008783 4.4e-15 87.0 211 31.8
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 2.8e-14 84.3 685 21.6
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 2.8e-06 57.8 65 44.6
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 8.2e-06 56.2 37 62.2


User provided reference genes

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