Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31079 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 1.2e-144 516.5 268 100.0
SEGI_25790 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 3.2e-73 279.3 171 83.0
Ca_08520_v3 Cicer arietinum L. HOM05D004472 ORTHO05D007169 5.5e-57 225.3 171 62.6
Thecc.05G171300 Theobroma cacao HOM05D004472 ORTHO05D007169 2.7e-56 223.0 169 61.5
arahy.Tifrunner.gnm1.ann1.VM941Y Arachis hypogaea HOM05D004472 ORTHO05D007169 7.9e-56 221.5 169 62.7
arahy.Tifrunner.gnm1.ann1.W50LA9 Arachis hypogaea HOM05D004472 ORTHO05D007169 1.4e-55 220.7 169 62.1
Glyma.19G147500 Glycine max HOM05D004472 ORTHO05D007169 1.8e-55 220.3 172 61.0
PGR142G1378 Punica granatum HOM05D004472 ORTHO05D007169 1.8e-55 220.3 167 60.5
FAN02G0232 Fragaria x ananassa HOM05D004472 ORTHO05D007169 3.9e-55 219.2 175 60.0
Gohir.A04G055778 Gossypium hirsutum HOM05D004472 ORTHO05D007169 3.9e-55 219.2 227 49.8
FAN05G5703 Fragaria x ananassa HOM05D004472 ORTHO05D007169 8.8e-55 218.0 169 60.9
Psat3g068520 Pisum sativum HOM05D004472 ORTHO05D007169 8.8e-55 218.0 171 60.2
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 1.1e-54 217.6 235 50.2
FAN09G4048 Fragaria x ananassa HOM05D004472 ORTHO05D007169 2.0e-54 216.9 169 60.9
Glyma.03G144600 Glycine max HOM05D004472 ORTHO05D007169 2.0e-54 216.9 170 60.6
Aqoxy1G00476 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 2.5e-54 216.5 169 62.7
FvH4_6g22330 Fragaria vesca HOM05D004472 ORTHO05D007169 3.3e-54 216.1 169 60.9
Gorai.012G101400 Gossypium raimondii HOM05D004472 ORTHO05D007169 3.3e-54 216.1 227 49.3
TPR.G18209 Trifolium pratense HOM05D004472 ORTHO05D007169 5.7e-54 215.3 171 60.8
TWI74G0546 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 5.7e-54 215.3 166 62.0
FAN14G1969 Fragaria x ananassa HOM05D004472 ORTHO05D007169 7.4e-54 214.9 169 60.4
Lalb_Chr15g0079011 Lupinus albus HOM05D004472 ORTHO05D007169 7.4e-54 214.9 216 50.0
Nn3g18269 Nelumbo nucifera HOM05D004472 ORTHO05D007169 7.4e-54 214.9 169 61.5
CDE04G2547 Ceratophyllum demersum HOM05D004472 ORTHO05D007169 1.7e-53 213.8 209 54.5
RcHm_v2.0_Chr3g0479691 Rosa chinensis HOM05D004472 ORTHO05D007169 2.2e-53 213.4 169 60.4
QL07p023729 Quercus lobata HOM05D004472 ORTHO05D007169 2.8e-53 213.0 169 58.6
TAR623G1736 Trochodendron aralioides HOM05D004472 ORTHO05D007169 6.3e-53 211.8 233 49.8
CSS0032720 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 8.2e-53 211.5 169 60.4
Gohir.D04G090500 Gossypium hirsutum HOM05D004472 ORTHO05D007169 8.2e-53 211.5 227 48.5
Manes.08G044600 Manihot esculenta HOM05D004472 ORTHO05D007169 8.2e-53 211.5 227 48.0
COL.COLO4_33983 Corchorus olitorius HOM05D004472 ORTHO05D007169 1.4e-52 210.7 221 48.4
Sabra06G0147500 Salix brachista HOM05D004472 ORTHO05D007169 1.8e-52 210.3 201 51.7
Atru.chr8.1111 Acer truncatum HOM05D004472 ORTHO05D007169 2.4e-52 209.9 166 60.2
Phvul.001G143200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 2.4e-52 209.9 170 60.0
Sabra16G0049800 Salix brachista HOM05D004472 ORTHO05D007169 2.4e-52 209.9 201 52.2
Sed0005670 Sechium edule HOM05D004472 ORTHO05D007169 2.4e-52 209.9 166 59.0
GSVIVG01033498001 Vitis vinifera HOM05D004472 ORTHO05D007169 3.1e-52 209.5 169 59.8
Hma1.2p1_0386F.1_g141865 Hydrangea macrophylla HOM05D004472 ORTHO05D007169 4.1e-52 209.1 216 51.4
Lj1g0006426 Lotus japonicus HOM05D004472 ORTHO05D007169 4.1e-52 209.1 171 58.5
MD14G1057800 Malus domestica HOM05D004472 ORTHO05D007169 4.1e-52 209.1 169 58.6
THA.LOC104824475 Tarenaya hassleriana HOM05D004472 ORTHO05D007169 4.1e-52 209.1 169 58.6
CSS0031939 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 6.9e-52 208.4 169 59.8
CsaV3_3G038830 Cucumis sativus L. HOM05D004472 ORTHO05D007169 6.9e-52 208.4 166 59.6
Medtr7g093210 Medicago truncatula HOM05D004472 ORTHO05D007169 6.9e-52 208.4 169 61.5
TWI77G0336 Tripterygium wilfordii HOM05D004472 ORTHO05D007169 6.9e-52 208.4 166 61.4
AT2G42120 Arabidopsis thaliana HOM05D004472 ORTHO05D007169 9.1e-52 208.0 169 56.8
SGA_v2.0_scaffold69G23061 Striga asiatica HOM05D004472 ORTHO05D007169 9.1e-52 208.0 233 48.1
Thhalv10016664m.g Eutrema salsugineum HOM05D004472 ORTHO05D007169 1.2e-51 207.6 169 58.0
CANSAT64G0932 Cannabis sativa HOM05D004472 ORTHO05D007169 1.5e-51 207.2 169 60.4
Cpa.g.sc85.67 Carica papaya HOM05D004472 ORTHO05D007169 1.5e-51 207.2 169 58.6
Lsat_1_v5_gn_5_163440 Lactuca sativa HOM05D004472 ORTHO05D007169 1.5e-51 207.2 196 52.6
Rhsim03G0006000 Rhododendron simsii HOM05D004472 ORTHO05D007169 1.5e-51 207.2 168 58.3
Eucgr.K01838 Eucalyptus grandis HOM05D004472 ORTHO05D007169 2.0e-51 206.8 221 48.0
HanXRQChr13g0390871 Helianthus annuus HOM05D004472 ORTHO05D007169 2.0e-51 206.8 196 52.6
Lj2C366G13 Lonicera japonica HOM05D004472 ORTHO05D007169 2.0e-51 206.8 175 60.6
Dinv24072 Davidia involucrata HOM05D004472 ORTHO05D007169 2.6e-51 206.5 216 50.9
CiPaw.10G026500 Carya illinoinensis HOM05D004472 ORTHO05D007169 3.4e-51 206.1 221 47.5
Oeu007762.1 Olea europaea HOM05D004472 ORTHO05D007169 3.4e-51 206.1 169 58.6
Potri.006G192400 Populus trichocarpa HOM05D004472 ORTHO05D007169 4.5e-51 205.7 241 46.9
Actinidia22035 Actinidia chinensis HOM05D004472 ORTHO05D007169 5.9e-51 205.3 169 57.4
ATR0807G137 Amborella trichopoda HOM05D004472 ORTHO05D007169 5.9e-51 205.3 169 59.8
MSTRG.6484 Avicennia marina HOM05D004472 ORTHO05D007169 5.9e-51 205.3 169 57.4
Prupe.7G076900 Prunus persica HOM05D004472 ORTHO05D007169 5.9e-51 205.3 169 58.6
Sc25g0005090 Simmondsia chinensis HOM05D004472 ORTHO05D007169 1.0e-50 204.5 169 58.6
Zm00001eb002170 Zea mays HOM05D004472 ORTHO05D007169 1.0e-50 204.5 167 58.1
PSO384G4825 Papaver somniferum HOM05D004472 ORTHO05D007169 1.3e-50 204.1 169 59.8
Potri.016G045800 Populus trichocarpa HOM05D004472 ORTHO05D007169 1.3e-50 204.1 227 46.7
Phvul.001G142200 Phaseolus vulgaris HOM05D004472 ORTHO05D007169 1.7e-50 203.8 170 57.6
Ciclev10012551m.g Citrus clementina HOM05D004472 ORTHO05D007169 2.2e-50 203.4 229 47.6
Sp4g24330 Schrenkiella parvula HOM05D004472 ORTHO05D007169 2.2e-50 203.4 169 56.2
ECA248G2191 Erigeron canadensis HOM05D004472 ORTHO05D007169 2.9e-50 203.0 196 51.5
Ah.13g075820 Amaranthus hybridus HOM05D004472 ORTHO05D007169 3.8e-50 202.6 166 59.0
BcaB06g29226 Brassica carinata HOM05D004472 ORTHO05D007169 3.8e-50 202.6 169 56.8
BcaC02g07263 Brassica carinata HOM05D004472 ORTHO05D007169 3.8e-50 202.6 232 44.8
PSO339G4742 Papaver somniferum HOM05D004472 ORTHO05D007169 3.8e-50 202.6 169 59.2
MD12G1057200 Malus domestica HOM05D004472 ORTHO05D007169 6.5e-50 201.8 169 58.0
AL4G40490 Arabidopsis lyrata HOM05D004472 ORTHO05D007169 8.5e-50 201.4 231 43.7
Aa31LG1G24100 Aethionema arabicum HOM05D004472 ORTHO05D007169 1.1e-49 201.1 175 56.0
Sed0018995 Sechium edule HOM05D004472 ORTHO05D007169 1.1e-49 201.1 166 57.2
A04p32010 Brassica napus HOM05D004472 ORTHO05D007169 1.4e-49 200.7 170 56.5
Migut.J01839 Erythranthe guttata HOM05D004472 ORTHO05D007169 2.5e-49 199.9 217 49.3
BraA04t18658Z Brassica rapa HOM05D004472 ORTHO05D007169 4.2e-49 199.1 170 55.9
Os03g0128500 Oryza sativa ssp. japonica HOM05D004472 ORTHO05D007169 4.2e-49 199.1 168 57.7
Nitab4.5_0001137g0080 Nicotiana tabacum HOM05D004472 ORTHO05D007169 7.2e-49 198.4 169 55.6
Pp3c3_28090 Physcomitrium patens HOM05D004472 ORTHO05D007169 1.2e-48 197.6 165 58.2
VMungo1383G3660 Vigna mungo HOM05D004472 ORTHO05D007169 1.6e-48 197.2 170 56.5
MELO3C030998.2 Cucumis melo HOM05D004472 ORTHO05D007169 2.7e-48 196.4 199 49.2
Solyc03g063340.3 Solanum lycopersicum HOM05D004472 ORTHO05D007169 2.7e-48 196.4 169 56.2
PGSC0003DMG400014974 Solanum tuberosum HOM05D004472 ORTHO05D007169 2.7e-48 196.4 169 56.2
BolC4t28450H Brassica oleracea HOM05D004472 ORTHO05D007169 4.7e-48 195.7 232 43.5
Nitab4.5_0007619g0020 Nicotiana tabacum HOM05D004472 ORTHO05D007169 4.7e-48 195.7 169 54.4
Hund19203 Selenicereus undatus HOM05D004472 ORTHO05D007169 4.7e-48 195.7 169 55.6
CSS0048424 Camellia sinensis var. sinensis HOM05D004472 ORTHO05D007169 6.1e-48 195.3 163 57.7
Sopen03g016030 Solanum pennellii HOM05D004472 ORTHO05D007169 7.9e-48 194.9 169 56.2
EL10Ac3g06916 Beta vulgaris HOM05D004472 ORTHO05D007169 1.0e-47 194.5 169 54.4
C04p69510 Brassica napus HOM05D004472 ORTHO05D007169 1.8e-47 193.7 228 46.5
CAN.G273.20 Capsicum annuum HOM05D004472 ORTHO05D007169 3.0e-47 193.0 169 54.4
vmacro07908 Vaccinium macrocarpon HOM05D004472 ORTHO05D007169 1.3e-45 187.6 173 55.5
HPP92_018591 Vanilla planifolia HOM05D004472 ORTHO05D007169 2.8e-45 186.4 166 58.4
Carub.0004s2446 Capsella rubella HOM05D004472 ORTHO05D007169 1.8e-44 183.7 229 41.9
SMO111G0006 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 5.3e-44 182.2 167 50.9
HPP92_006516 Vanilla planifolia HOM05D004472 ORTHO05D007169 1.5e-43 180.6 162 57.4
Mapoly0039s0092 Marchantia polymorpha HOM05D004472 ORTHO05D007169 2.0e-43 180.3 171 52.0
SMO339G0063 Selaginella moellendorffii HOM05D004472 ORTHO05D007169 3.5e-43 179.5 178 50.6
AagrBONN_evm.TU.Sc2ySwM_362.678 Anthoceros agrestis HOM05D004472 ORTHO05D007169 1.3e-42 177.6 168 54.8
Peaxi162Scf00258g00730 Petunia axillaris HOM05D004472 ORTHO05D007169 6.5e-42 175.3 162 53.1
CBR_g38861 Chara braunii HOM05D004472 ORTHO05D000002 1.1e-36 157.9 177 46.3
CBR_g63079 Chara braunii HOM05D004472 ORTHO05D007169 1.1e-36 157.9 177 46.3
MBI06_g29491_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 1.7e-34 150.6 107 64.5
SHI33668 Sapria himalayana HOM05D004472 ORTHO05D007169 3.8e-34 149.4 110 63.6
SEGI_06501 Sequoiadendron giganteum HOM05D004472 ORTHO05D007169 1.8e-31 140.6 135 60.0
SalBow6G5437 Salvia bowleyana HOM05D004472 ORTHO05D007169 2.7e-27 126.7 168 44.0
ClCG10G017520 Citrullus lanatus HOM05D004472 ORTHO05D007169 6.5e-26 122.1 166 43.4
PRCOL_00001477 Prasinoderma coloniale HOM05D004472 ORTHO05D007169 6.1e-24 115.5 165 38.8
MCO03G010 Micromonas commoda HOM05D004472 ORTHO05D007169 4.0e-23 112.8 168 39.3
Haze_19988 Corylus avellana HOM05D004472 ORTHO05D007169 1.5e-22 110.9 281 31.0
Duzib128G1617 Durio zibethinus HOM05D004472 ORTHO05D007169 3.7e-21 106.3 90 57.8
Haze_19990 Corylus avellana HOM05D004472 ORTHO05D007169 6.3e-21 105.5 245 32.7
Aqoxy2G02978 Aquilegia oxysepala HOM05D004472 ORTHO05D007169 4.5e-19 99.4 89 59.6
Cre08.g374050 Chlamydomonas reinhardtii HOM05D004472 ORTHO05D007169 3.8e-18 96.3 206 30.6
AUR62015368 Chenopodium quinoa HOM05D004472 ORTHO05D007169 3.3e-17 93.2 93 52.7
AUR62012036 Chenopodium quinoa HOM05D004472 ORTHO05D007169 4.2e-17 92.8 93 51.6
MBI06_g29494_MAGBIO Magnolia biondii HOM05D004472 ORTHO05D007169 1.0e-10 71.6 58 53.4
SHI42174 Sapria himalayana HOM05D004472 ORTHO05D007169 5.6e-09 65.9 56 51.8
CARHR137180 Cardamine hirsuta HOM05D004472 ORTHO05D007169 1.2e-08 64.7 55 56.4
CARHR228020 Cardamine hirsuta HOM05D004472 ORTHO05D007169 4.0e-07 59.7 63 47.6


User provided reference genes

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