Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_31029 Sequoiadendron giganteum HOM05D006584 ORTHO05D007640 3.1e-41 171.4 87 100.0
SEGI_11187 Sequoiadendron giganteum HOM05D006584 ORTHO05D007640 2.0e-24 115.5 58 94.8
ATR0716G054 Amborella trichopoda HOM05D006584 ORTHO05D007640 6.6e-20 100.5 58 77.6
AUR62009158 Chenopodium quinoa HOM05D006584 ORTHO05D007640 6.6e-20 100.5 89 56.2
Lalb_Chr14g0367721 Lupinus albus HOM05D006584 ORTHO05D007640 1.6e-18 95.9 61 68.9
HanXRQChr17g0538441 Helianthus annuus HOM05D006584 ORTHO05D007640 2.8e-18 95.1 61 67.2
CANSAT25G1083 Cannabis sativa HOM05D006584 ORTHO05D007640 3.6e-18 94.7 61 65.6
GSVIVG01035364001 Vitis vinifera HOM05D006584 ORTHO05D007640 4.7e-18 94.4 61 65.6
arahy.Tifrunner.gnm1.ann1.3J87F1 Arachis hypogaea HOM05D006584 ORTHO05D007640 6.2e-18 94.0 61 67.2
arahy.Tifrunner.gnm1.ann1.U8SEXI Arachis hypogaea HOM05D006584 ORTHO05D007640 6.2e-18 94.0 61 67.2
QL02p001321 Quercus lobata HOM05D006584 ORTHO05D007640 1.1e-17 93.2 61 63.9
CiPaw.15G039500 Carya illinoinensis HOM05D006584 ORTHO05D007640 1.4e-17 92.8 89 51.7
Eucgr.C00641 Eucalyptus grandis HOM05D006584 ORTHO05D007640 1.4e-17 92.8 61 63.9
AUR62009159 Chenopodium quinoa HOM05D006584 ORTHO05D007640 1.8e-17 92.4 61 65.6
Lj8A542T16 Lonicera japonica HOM05D006584 ORTHO05D007640 1.8e-17 92.4 68 63.2
SalBow4G2021 Salvia bowleyana HOM05D006584 ORTHO05D007640 1.8e-17 92.4 58 67.2
Haze_18198 Corylus avellana HOM05D006584 ORTHO05D007640 2.4e-17 92.0 61 63.9
PGR031G2613 Punica granatum HOM05D006584 ORTHO05D007640 2.4e-17 92.0 61 65.6
CDE05G0889 Ceratophyllum demersum HOM05D006584 ORTHO05D007640 3.1e-17 91.7 58 70.7
AUR62022066 Chenopodium quinoa HOM05D006584 ORTHO05D007640 3.1e-17 91.7 61 65.6
Rhsim11G0044500 Rhododendron simsii HOM05D006584 ORTHO05D007640 3.1e-17 91.7 89 48.3
vmacro00145 Vaccinium macrocarpon HOM05D006584 ORTHO05D007640 3.1e-17 91.7 89 51.7
Actinidia01191 Actinidia chinensis HOM05D006584 ORTHO05D007640 4.0e-17 91.3 89 48.3
Aqoxy7G01236 Aquilegia oxysepala HOM05D006584 ORTHO05D007640 4.0e-17 91.3 89 50.6
CAN.G181.69 Capsicum annuum HOM05D006584 ORTHO05D007640 4.0e-17 91.3 58 62.1
Cfa017949 Carpinus fangiana HOM05D006584 ORTHO05D007640 4.0e-17 91.3 61 62.3
Migut.A00139 Erythranthe guttata HOM05D006584 ORTHO05D007640 4.0e-17 91.3 58 65.5
FAN20G0896 Fragaria x ananassa HOM05D006584 ORTHO05D007640 4.0e-17 91.3 61 63.9
MD08G1043300 Malus domestica HOM05D006584 ORTHO05D007640 4.0e-17 91.3 61 63.9
Hund19462 Selenicereus undatus HOM05D006584 ORTHO05D007640 4.0e-17 91.3 58 67.2
Cc08_g10530 Coffea canephora HOM05D006584 ORTHO05D007640 5.2e-17 90.9 61 63.9
FvH4_2g32010 Fragaria vesca HOM05D006584 ORTHO05D007640 5.2e-17 90.9 61 62.3
Hma1.2p1_0482F.1_g162540 Hydrangea macrophylla HOM05D006584 ORTHO05D007640 5.2e-17 90.9 61 60.7
Hma1.2p1_0482F.1_g162550 Hydrangea macrophylla HOM05D006584 ORTHO05D007640 5.2e-17 90.9 61 60.7
Prupe.1G413100 Prunus persica HOM05D006584 ORTHO05D007640 5.2e-17 90.9 61 62.3
Glyma.17G229600 Glycine max HOM05D006584 ORTHO05D007640 6.8e-17 90.5 61 62.3
Lsat_1_v5_gn_3_24361 Lactuca sativa HOM05D006584 ORTHO05D007640 6.8e-17 90.5 61 62.3
MSTRG.11661 Avicennia marina HOM05D006584 ORTHO05D007640 8.9e-17 90.1 89 50.6
Ca_13172_v3 Cicer arietinum L. HOM05D006584 ORTHO05D007640 8.9e-17 90.1 82 53.7
Ca_14355_v3 Cicer arietinum L. HOM05D000495 ORTHO05D007640 8.9e-17 90.1 82 53.7
Lj8A547G7 Lonicera japonica HOM05D006584 ORTHO05D007640 8.9e-17 90.1 61 62.3
Lj5g0009338 Lotus japonicus HOM05D006584 ORTHO05D007640 8.9e-17 90.1 61 62.3
VMungo0647G2476 Vigna mungo HOM05D006584 ORTHO05D007640 8.9e-17 90.1 61 62.3
CSS0009868 Camellia sinensis var. sinensis HOM05D006584 ORTHO05D007640 1.2e-16 89.7 61 62.3
CSS0020610 Camellia sinensis var. sinensis HOM05D006584 ORTHO05D007640 1.2e-16 89.7 61 62.3
Dinv27980 Davidia involucrata HOM05D006584 ORTHO05D007640 1.2e-16 89.7 61 59.0
FAN15G2290 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.2e-16 89.7 57 68.4
Gohir.D13G193900 Gossypium hirsutum HOM05D006584 ORTHO05D007640 1.2e-16 89.7 57 71.9
Gorai.013G220000 Gossypium raimondii HOM05D006584 ORTHO05D007640 1.2e-16 89.7 57 71.9
Duzib168G0725 Durio zibethinus HOM05D006584 ORTHO05D007640 1.5e-16 89.4 89 49.4
Peaxi162Scf00477g00010 Petunia axillaris HOM05D006584 ORTHO05D007640 1.5e-16 89.4 58 63.8
Sp2g21680 Schrenkiella parvula HOM05D006584 ORTHO05D007640 1.5e-16 89.4 89 50.6
FAN27G2179 Fragaria x ananassa HOM05D006584 ORTHO05D007640 2.0e-16 89.0 57 70.2
PSO063G1048 Papaver somniferum HOM05D006584 ORTHO05D007640 2.0e-16 89.0 58 67.2
Phvul.001G034500 Phaseolus vulgaris HOM05D006584 ORTHO05D007640 2.0e-16 89.0 61 60.7
PGSC0003DMG400029944 Solanum tuberosum HOM05D006584 ORTHO05D007640 2.0e-16 89.0 58 62.1
SGA_v2.0_scaffold88G27225 Striga asiatica HOM05D006584 ORTHO05D007640 2.0e-16 89.0 58 65.5
Atru.chr7.1052 Acer truncatum HOM05D006584 ORTHO05D007640 2.6e-16 88.6 61 59.0
Medtr1g016440 Medicago truncatula HOM05D006584 ORTHO05D007640 2.6e-16 88.6 82 52.4
Nitab4.5_0001584g0100 Nicotiana tabacum HOM05D006584 ORTHO05D007640 2.6e-16 88.6 58 60.3
Solyc08g065350.4 Solanum lycopersicum HOM05D006584 ORTHO05D007640 2.6e-16 88.6 58 62.1
Sopen08g018910 Solanum pennellii HOM05D006584 ORTHO05D007640 2.6e-16 88.6 58 62.1
HPP92_026784 Vanilla planifolia HOM05D006584 ORTHO05D007640 2.6e-16 88.6 58 63.8
Psat6g020800 Pisum sativum HOM05D006584 ORTHO05D007640 3.4e-16 88.2 82 51.2
Thecc.09G053100 Theobroma cacao HOM05D006584 ORTHO05D007640 3.4e-16 88.2 89 49.4
TPR.G13096 Trifolium pratense HOM05D006584 ORTHO05D007640 3.4e-16 88.2 82 52.4
Aa31LG11G5020 Aethionema arabicum HOM05D006584 ORTHO05D007640 4.4e-16 87.8 89 49.4
Carub.0006s2380 Capsella rubella HOM05D006584 ORTHO05D007640 4.4e-16 87.8 61 60.7
ClCG05G017800 Citrullus lanatus HOM05D006584 ORTHO05D007640 4.4e-16 87.8 61 62.3
MELO3C016865.2 Cucumis melo HOM05D006584 ORTHO05D007640 4.4e-16 87.8 61 62.3
CsaV3_4G035570 Cucumis sativus L. HOM05D006584 ORTHO05D007640 4.4e-16 87.8 61 62.3
Thhalv10004371m.g Eutrema salsugineum HOM05D006584 ORTHO05D007640 4.4e-16 87.8 89 48.3
PSO782G5661 Papaver somniferum HOM05D006584 ORTHO05D007640 4.4e-16 87.8 58 69.0
DCAR_004431 Daucus carota HOM05D006584 ORTHO05D007640 5.8e-16 87.4 58 63.8
Duzib150G0622 Durio zibethinus HOM05D006584 ORTHO05D007640 5.8e-16 87.4 58 65.5
Gohir.A13G187100 Gossypium hirsutum HOM05D006584 ORTHO05D007640 5.8e-16 87.4 57 70.2
RcHm_v2.0_Chr6g0310741 Rosa chinensis HOM05D006584 ORTHO05D007640 5.8e-16 87.4 58 67.2
AL6G38030 Arabidopsis lyrata HOM05D006584 ORTHO05D007640 7.6e-16 87.0 89 47.2
AT5G26040 Arabidopsis thaliana HOM05D006584 ORTHO05D007640 7.6e-16 87.0 89 48.3
EL10Ac2g03896 Beta vulgaris HOM05D006584 ORTHO05D007640 9.9e-16 86.7 61 60.7
Ciclev10008784m.g Citrus clementina HOM05D006584 ORTHO05D007640 9.9e-16 86.7 61 57.4
Manes.03G047600 Manihot esculenta HOM05D006584 ORTHO05D007640 9.9e-16 86.7 52 71.2
Nitab4.5_0004456g0010 Nicotiana tabacum HOM05D006584 ORTHO05D007640 9.9e-16 86.7 80 55.0
PSO832G1739 Papaver somniferum HOM05D006584 ORTHO05D007640 9.9e-16 86.7 58 65.5
THA.LOC104811245 Tarenaya hassleriana HOM05D006584 ORTHO05D007640 9.9e-16 86.7 61 59.0
CARHR187290 Cardamine hirsuta HOM05D006584 ORTHO05D007640 1.3e-15 86.3 89 48.3
Os06g0571100 Oryza sativa ssp. japonica HOM05D006584 ORTHO05D007640 1.3e-15 86.3 58 62.1
Sed0000821 Sechium edule HOM05D006584 ORTHO05D007640 1.3e-15 86.3 61 60.7
COL.COLO4_21049 Corchorus olitorius HOM05D006584 ORTHO05D007640 2.2e-15 85.5 89 47.2
AUR62022067 Chenopodium quinoa HOM05D006584 ORTHO05D007640 2.9e-15 85.1 73 56.2
Sabra06G0178400 Salix brachista HOM05D006584 ORTHO05D007640 2.9e-15 85.1 57 64.9
SMO228G0123 Selaginella moellendorffii HOM05D006584 ORTHO05D007640 6.4e-15 84.0 82 54.9
unitig_748.g7524 Utricularia gibba HOM05D006584 ORTHO05D007640 1.1e-14 83.2 61 60.7
SMO325G0002 Selaginella moellendorffii HOM05D006584 ORTHO05D007640 1.4e-14 82.8 56 66.1
Pp3c6_24640 Physcomitrium patens HOM05D006584 ORTHO05D007640 3.2e-14 81.6 69 53.6
Mapoly0007s0200 Marchantia polymorpha HOM05D006584 ORTHO05D007640 4.2e-14 81.3 61 63.9
A06p36540 Brassica napus HOM05D006584 ORTHO05D007640 3.5e-13 78.2 95 44.2
BraA06t26580Z Brassica rapa HOM05D006584 ORTHO05D007640 3.5e-13 78.2 95 44.2
BolC7t44725H Brassica oleracea HOM05D006584 ORTHO05D007640 7.8e-13 77.0 95 44.2
Pp3c16_3940 Physcomitrium patens HOM05D006584 ORTHO05D007640 1.0e-12 76.6 56 62.5
AagrBONN_evm.TU.Sc2ySwM_368.1186 Anthoceros agrestis HOM05D006584 ORTHO05D007640 4.8e-10 67.8 72 48.6
Cre03.g158200 Chlamydomonas reinhardtii HOM05D006584 ORTHO05D007640 3.4e-08 61.6 50 56.0
Cpa.g.sc7.166 Carica papaya HOM05D006584 ORTHO05D007640 4.9e-07 57.8 43 58.1


User provided reference genes

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