Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 5.8e-132 474.2 231 100.0
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 5.3e-40 168.7 217 39.6
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 9.9e-39 164.5 219 40.2
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 1.1e-37 161.0 219 37.4
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 1.6e-36 157.1 214 38.8
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 3.0e-35 152.9 208 38.5
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.5e-34 150.6 214 37.4
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 1.9e-34 150.2 217 38.7
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 3.3e-34 149.4 217 38.2
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 9.6e-34 147.9 214 36.0
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 2.1e-33 146.7 213 36.2
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 6.2e-33 145.2 208 36.1
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 6.2e-33 145.2 219 35.6
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 1.1e-32 144.4 214 37.4
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 1.8e-32 143.7 219 35.6
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 2.4e-32 143.3 216 37.5
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 3.1e-32 142.9 212 35.4
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 3.1e-32 142.9 217 34.6
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 5.3e-32 142.1 217 36.9
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 5.3e-32 142.1 219 34.7
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 6.9e-32 141.7 213 35.2
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 6.9e-32 141.7 213 36.2
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 1.2e-31 141.0 217 34.1
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 2.6e-31 139.8 210 33.3
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 3.4e-31 139.4 213 35.7
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 3.4e-31 139.4 229 34.1
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 3.4e-31 139.4 216 36.1
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 1.3e-30 137.5 217 35.0
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 1.3e-30 137.5 214 33.6
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 1.7e-30 137.1 202 37.1
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 2.2e-30 136.7 216 35.2
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 3.8e-30 136.0 217 37.3
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 3.8e-30 136.0 225 35.6
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 4.9e-30 135.6 209 33.0
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 6.4e-30 135.2 212 33.0
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 1.1e-29 134.4 213 33.3
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 1.1e-29 134.4 217 35.5
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 1.4e-29 134.0 216 34.7
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 3.2e-29 132.9 222 33.3
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 7.1e-29 131.7 206 33.5
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 1.2e-28 131.0 221 32.6
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 1.6e-28 130.6 223 34.5
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 2.1e-28 130.2 202 34.2
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 2.1e-28 130.2 215 32.1
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 2.7e-28 129.8 223 35.9
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 2.7e-28 129.8 214 33.2
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 2.7e-28 129.8 214 34.6
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 3.5e-28 129.4 217 33.2
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 6.0e-28 128.6 217 31.3
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 6.0e-28 128.6 214 33.2
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 1.3e-27 127.5 210 34.8
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 1.8e-27 127.1 214 32.2
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 3.0e-27 126.3 238 35.3
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 3.0e-27 126.3 223 33.6
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 3.0e-27 126.3 210 33.3
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 3.9e-27 125.9 206 31.6
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 3.9e-27 125.9 214 33.2
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 5.1e-27 125.6 215 32.1
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 5.1e-27 125.6 213 36.2
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 6.7e-27 125.2 217 32.3
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 1.9e-26 123.6 239 31.8
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 2.5e-26 123.2 215 32.1
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 2.5e-26 123.2 218 33.0
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 4.3e-26 122.5 212 30.7
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 7.4e-26 121.7 212 31.6
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 7.4e-26 121.7 235 33.2
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 1.6e-25 120.6 203 36.9
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.6e-25 120.6 209 33.0
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 1.6e-25 120.6 192 33.3
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 1.6e-25 120.6 215 32.1
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 2.1e-25 120.2 226 32.3
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 2.1e-25 120.2 211 32.7
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 3.7e-25 119.4 220 31.4
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 4.8e-25 119.0 189 33.3
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 6.2e-25 118.6 224 31.7
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 1.1e-24 117.9 211 31.8
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.1e-24 117.9 220 31.8
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 1.4e-24 117.5 213 31.9
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 1.8e-24 117.1 209 31.6
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 2.4e-24 116.7 224 32.1
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 4.0e-24 115.9 209 31.6
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 9.0e-24 114.8 189 32.3
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 2.6e-23 113.2 179 32.4
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 7.6e-23 111.7 225 30.7
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 9.9e-23 111.3 219 31.1
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 9.9e-23 111.3 209 31.1
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.2e-22 110.2 182 31.9
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.2e-22 110.2 226 29.6
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 8.4e-22 108.2 220 29.5
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 2.5e-21 106.7 231 29.9
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 3.2e-21 106.3 243 29.6
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 4.2e-21 105.9 229 29.3
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 7.9e-20 101.7 177 32.2
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 1.8e-19 100.5 184 32.6
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 8.7e-19 98.2 184 32.1
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 1.5e-18 97.4 178 32.6
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 3.3e-18 96.3 221 29.9
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 8.2e-17 91.7 179 29.6
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 8.2e-17 91.7 217 26.7
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 3.4e-15 86.3 200 26.0
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 3.4e-15 86.3 213 28.6
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 1.0e-14 84.7 142 31.7
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 6.5e-14 82.0 217 26.7
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 4.2e-13 79.3 143 30.8
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 1.3e-11 74.3 214 26.2
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 3.1e-08 63.2 171 30.4
CBR_g12009 Chara braunii HOM05D006101 ORTHO05D007422 2.6e-07 60.1 218 23.9


User provided reference genes

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