Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30894 Sequoiadendron giganteum HOM05D006331 ORTHO05D008043 5.0e-105 384.4 190 100.0
PGR102G1699 Punica granatum HOM05D006331 ORTHO05D008043 4.0e-54 215.3 149 70.5
Phvul.002G275600 Phaseolus vulgaris HOM05D006331 ORTHO05D008043 1.5e-53 213.4 192 57.8
ATR0665G153 Amborella trichopoda HOM05D006331 ORTHO05D008043 2.0e-53 213.0 145 71.7
Medtr8g094730 Medicago truncatula HOM05D006331 ORTHO05D008043 2.0e-53 213.0 145 71.7
Os06g0214900 Oryza sativa ssp. japonica HOM05D006331 ORTHO05D008043 2.0e-53 213.0 169 64.5
Nn5g28340 Nelumbo nucifera HOM05D006331 ORTHO05D008043 2.6e-53 212.6 148 70.3
Thecc.01G141800 Theobroma cacao HOM05D006331 ORTHO05D008043 2.6e-53 212.6 145 73.1
DCAR_013180 Daucus carota HOM05D006331 ORTHO05D008043 3.4e-53 212.2 145 69.0
Duzib264G0015 Durio zibethinus HOM05D006331 ORTHO05D008043 7.6e-53 211.1 170 63.5
Oeu042319.1 Olea europaea HOM05D006331 ORTHO05D008043 9.9e-53 210.7 172 58.7
Carub.0006s0771 Capsella rubella HOM05D006331 ORTHO05D008043 2.2e-52 209.5 147 69.4
Ciclev10000807m.g Citrus clementina HOM05D006331 ORTHO05D008043 3.8e-52 208.8 148 70.3
COL.COLO4_12111 Corchorus olitorius HOM05D006331 ORTHO05D008043 6.4e-52 208.0 146 70.5
Lalb_Chr12g0202951 Lupinus albus HOM05D006331 ORTHO05D008043 1.1e-51 207.2 193 55.4
Potri.007G098700 Populus trichocarpa HOM05D006331 ORTHO05D008043 2.4e-51 206.1 145 70.3
Sabra07G0082300 Salix brachista HOM05D006331 ORTHO05D008043 2.4e-51 206.1 145 71.7
Aqoxy6G00239 Aquilegia oxysepala HOM05D006331 ORTHO05D008043 4.2e-51 205.3 162 65.4
SalBow7G0499 Salvia bowleyana HOM05D006331 ORTHO05D008043 9.3e-51 204.1 167 60.5
Atru.BG.96.p Acer truncatum HOM05D006331 ORTHO05D008043 2.1e-50 203.0 145 68.3
Pp3c24_18540 Physcomitrium patens HOM05D006331 ORTHO05D008043 2.7e-50 202.6 150 66.0
SMO172G0167 Selaginella moellendorffii HOM05D006331 ORTHO05D008043 2.7e-50 202.6 178 61.8
Rhsim02G0171900 Rhododendron simsii HOM05D006331 ORTHO05D008043 6.0e-50 201.4 143 69.2
arahy.Tifrunner.gnm1.ann1.GTTL2Q Arachis hypogaea HOM05D006331 ORTHO05D008043 1.7e-49 199.9 188 54.8
CDE05G3097 Ceratophyllum demersum HOM05D006331 ORTHO05D008043 1.7e-49 199.9 170 59.4
TAR376G0453 Trochodendron aralioides HOM05D006331 ORTHO05D008043 3.9e-49 198.7 170 61.8
Migut.L00582 Erythranthe guttata HOM05D006331 ORTHO05D008043 5.1e-49 198.4 168 58.9
SGA_v2.0_scaffold143G35715 Striga asiatica HOM05D006331 ORTHO05D008043 5.1e-49 198.4 168 58.3
Haze_25343 Corylus avellana HOM05D006331 ORTHO05D008043 8.7e-49 197.6 138 71.0
HPP92_013148 Vanilla planifolia HOM05D006331 ORTHO05D008043 8.7e-49 197.6 150 67.3
Mapoly0183s0011 Marchantia polymorpha HOM05D006331 ORTHO05D008043 1.9e-48 196.4 150 68.0
MSTRG.3598 Avicennia marina HOM05D006331 ORTHO05D008043 2.5e-48 196.1 150 64.0
arahy.Tifrunner.gnm1.ann1.9C2QS4 Arachis hypogaea HOM05D006331 ORTHO05D008043 3.3e-48 195.7 196 52.0
HanXRQChr01g0017771 Helianthus annuus HOM05D006331 ORTHO05D008043 3.3e-48 195.7 171 58.5
Oeu050103.1 Olea europaea HOM05D006331 ORTHO05D008043 3.3e-48 195.7 163 61.3
Migut.L00271 Erythranthe guttata HOM05D006331 ORTHO05D008043 4.3e-48 195.3 168 58.3
Nitab4.5_0002100g0110 Nicotiana tabacum HOM05D006331 ORTHO05D008043 4.3e-48 195.3 147 63.9
TPR.G37385 Trifolium pratense HOM05D006331 ORTHO05D008043 4.3e-48 195.3 145 68.3
Ca_17611_v3 Cicer arietinum L. HOM05D006331 ORTHO05D008043 5.6e-48 194.9 145 67.6
Cc07_g19500 Coffea canephora HOM05D006331 ORTHO05D008043 5.6e-48 194.9 148 64.9
Prupe.5G076700 Prunus persica HOM05D006331 ORTHO05D008043 5.6e-48 194.9 148 67.6
ECA248G1760 Erigeron canadensis HOM05D006331 ORTHO05D008043 9.6e-48 194.1 174 56.9
VMungo0251G2607 Vigna mungo HOM05D006331 ORTHO05D008043 9.6e-48 194.1 192 54.7
Lj4g0002141 Lotus japonicus HOM05D006331 ORTHO05D008043 1.3e-47 193.7 145 67.6
GSVIVG01022367001 Vitis vinifera HOM05D006331 ORTHO05D008043 1.6e-47 193.4 148 64.9
AT5G08740 Arabidopsis thaliana HOM05D006331 ORTHO05D008043 2.8e-47 192.6 147 66.0
Glyma.05G195400 Glycine max HOM05D006331 ORTHO05D008043 4.8e-47 191.8 170 60.6
PSO170G3731 Papaver somniferum HOM05D006331 ORTHO05D008043 6.2e-47 191.4 148 62.8
PSO528G0231 Papaver somniferum HOM05D006331 ORTHO05D008043 1.1e-46 190.7 167 59.3
vmacro11024 Vaccinium macrocarpon HOM05D006331 ORTHO05D008043 1.4e-46 190.3 151 62.9
CARHR204260 Cardamine hirsuta HOM05D006331 ORTHO05D008043 1.8e-46 189.9 147 65.3
FAN13G1065 Fragaria x ananassa HOM05D006331 ORTHO05D008043 1.8e-46 189.9 148 64.9
Gohir.D12G001700 Gossypium hirsutum HOM05D006331 ORTHO05D008043 1.8e-46 189.9 161 63.4
BcaB08g37229 Brassica carinata HOM05D006331 ORTHO05D008043 2.4e-46 189.5 147 64.6
C09p68240 Brassica napus HOM05D006331 ORTHO05D008043 2.4e-46 189.5 147 64.6
BolC9t59572H Brassica oleracea HOM05D006331 ORTHO05D008043 2.4e-46 189.5 147 64.6
BraA10t44853Z Brassica rapa HOM05D006331 ORTHO05D008043 2.4e-46 189.5 147 64.6
RcHm_v2.0_Chr7g0202111 Rosa chinensis HOM05D006331 ORTHO05D008043 2.4e-46 189.5 148 65.5
AL6G19490 Arabidopsis lyrata HOM05D006331 ORTHO05D008043 3.1e-46 189.1 147 64.6
Psat7g043600 Pisum sativum HOM05D006331 ORTHO05D008043 3.1e-46 189.1 145 66.2
CSS0012546 Camellia sinensis var. sinensis HOM05D006331 ORTHO05D008043 4.0e-46 188.7 148 63.5
CSS0035477 Camellia sinensis var. sinensis HOM05D006331 ORTHO05D008043 4.0e-46 188.7 148 63.5
Eucgr.H05078 Eucalyptus grandis HOM05D006331 ORTHO05D008043 4.0e-46 188.7 150 64.0
Thhalv10013258m.g Eutrema salsugineum HOM05D006331 ORTHO05D008043 4.0e-46 188.7 150 63.3
Gohir.A12G001900 Gossypium hirsutum HOM05D006331 ORTHO05D008043 4.0e-46 188.7 161 62.7
CANSAT01G2335 Cannabis sativa HOM05D006331 ORTHO05D008043 5.3e-46 188.3 145 65.5
FvH4_5g00410 Fragaria vesca HOM05D006331 ORTHO05D008043 6.9e-46 188.0 148 64.2
FAN18G4276 Fragaria x ananassa HOM05D006331 ORTHO05D008043 6.9e-46 188.0 148 64.2
Dinv30329 Davidia involucrata HOM05D006331 ORTHO05D008043 9.0e-46 187.6 148 63.5
FAN04G0432 Fragaria x ananassa HOM05D006331 ORTHO05D008043 9.0e-46 187.6 148 64.9
A10p28040 Brassica napus HOM05D006331 ORTHO05D008043 1.2e-45 187.2 147 63.9
Gorai.008G001100 Gossypium raimondii HOM05D006331 ORTHO05D008043 1.5e-45 186.8 161 62.7
Sopen03g007600 Solanum pennellii HOM05D006331 ORTHO05D008043 1.5e-45 186.8 148 62.8
Solyc03g043750.3 Solanum lycopersicum HOM05D006331 ORTHO05D008043 2.0e-45 186.4 148 62.8
Sp6g34130 Schrenkiella parvula HOM05D006331 ORTHO05D008043 2.6e-45 186.0 150 62.7
MELO3C008946.2 Cucumis melo HOM05D006331 ORTHO05D008043 3.4e-45 185.7 145 62.8
QL10p040044 Quercus lobata HOM05D006331 ORTHO05D008043 3.4e-45 185.7 169 58.0
CiPaw.03G115600 Carya illinoinensis HOM05D006331 ORTHO05D008043 5.8e-45 184.9 169 58.6
CsaV3_4G030790 Cucumis sativus L. HOM05D006331 ORTHO05D008043 5.8e-45 184.9 145 63.4
PGSC0003DMG400016687 Solanum tuberosum HOM05D006331 ORTHO05D008043 9.9e-45 184.1 148 62.2
Aa31LG3G17820 Aethionema arabicum HOM05D006331 ORTHO05D008043 1.3e-44 183.7 148 64.2
CAN.G11.28 Capsicum annuum HOM05D006331 ORTHO05D008043 1.3e-44 183.7 145 63.4
Nitab4.5_0004338g0140 Nicotiana tabacum HOM05D006331 ORTHO05D008043 1.3e-44 183.7 147 61.9
Sed0028082 Sechium edule HOM05D006331 ORTHO05D008043 2.2e-44 183.0 170 58.2
TWI75G0452 Tripterygium wilfordii HOM05D006331 ORTHO05D008043 2.9e-44 182.6 148 63.5
Cfa002168 Carpinus fangiana HOM05D006331 ORTHO05D008043 8.4e-44 181.0 148 62.8
Cfa002176 Carpinus fangiana HOM05D006331 ORTHO05D008043 8.4e-44 181.0 148 62.8
MD04G1081700 Malus domestica HOM05D006331 ORTHO05D008043 1.1e-43 180.6 148 64.2
THA.LOC104819353 Tarenaya hassleriana HOM05D006331 ORTHO05D008043 1.1e-43 180.6 150 61.3
Hund07213 Selenicereus undatus HOM05D006331 ORTHO05D008043 1.8e-41 173.3 145 60.0
Actinidia16518 Actinidia chinensis HOM05D006331 ORTHO05D008043 2.3e-41 172.9 150 62.0
AUR62000551 Chenopodium quinoa HOM05D006331 ORTHO05D008043 6.7e-41 171.4 153 60.1
EL10Ac4g09668 Beta vulgaris HOM05D006331 ORTHO05D008043 2.5e-40 169.5 153 58.2
AUR62006903 Chenopodium quinoa HOM05D006331 ORTHO05D008043 2.8e-39 166.0 153 58.2
Lsat_1_v5_gn_1_81581 Lactuca sativa HOM05D006331 ORTHO05D008043 4.0e-38 162.2 173 54.3
Nn5g28377 Nelumbo nucifera HOM05D006331 ORTHO05D008043 1.4e-35 153.7 114 68.4
AagrBONN_evm.TU.Sc2ySwM_228.1808 Anthoceros agrestis HOM05D006331 ORTHO05D008043 7.1e-35 151.4 146 56.2
Glyma.08G002967 Glycine max HOM05D006331 ORTHO05D008043 7.9e-34 147.9 114 66.7
ClCG04G001810 Citrullus lanatus HOM05D006331 ORTHO05D008043 1.0e-33 147.5 145 57.2
MCO15G677 Micromonas commoda HOM05D006331 ORTHO05D008043 1.6e-31 140.2 145 49.7
PRCOL_00002259 Prasinoderma coloniale HOM05D006331 ORTHO05D008043 1.4e-30 137.1 149 45.0
Cre16.g671000 Chlamydomonas reinhardtii HOM05D006331 ORTHO05D008043 1.2e-29 134.0 146 45.9
Ah.06g188590 Amaranthus hybridus HOM05D006331 ORTHO05D008043 1.3e-28 130.6 126 55.6
Atru.chr4.1109 Acer truncatum HOM05D006331 ORTHO05D008043 2.1e-26 123.2 99 63.6
MBI06_g01071_MAGBIO Magnolia biondii HOM05D006331 ORTHO05D008043 7.4e-24 114.8 148 47.3
Sc16g0009670 Simmondsia chinensis HOM05D006331 ORTHO05D008043 2.8e-23 112.8 99 57.6
Cpa.g.sc37.37 Carica papaya HOM05D006331 ORTHO05D008043 4.8e-23 112.1 96 60.4
Manes.10G075600 Manihot esculenta HOM05D006331 ORTHO05D008043 1.4e-22 110.5 169 43.2
unitig_899.g14454 Utricularia gibba HOM05D006331 ORTHO05D008043 2.6e-21 106.3 145 44.8
Lj4C830T4 Lonicera japonica HOM05D006331 ORTHO05D008043 4.8e-15 85.5 70 57.1
DCAR_006357 Daucus carota HOM05D006331 ORTHO05D008043 9.1e-14 81.3 66 59.1
Peaxi162Scf00699g00515 Petunia axillaris HOM05D006331 ORTHO05D008043 1.4e-09 67.4 41 75.6


User provided reference genes

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