Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 1.0e-58 229.9 121 100.0
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 1.3e-18 96.7 87 59.8
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 8.6e-18 94.0 81 60.5
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 1.9e-17 92.8 90 60.0
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 9.5e-17 90.5 81 60.5
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 9.5e-17 90.5 84 61.9
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.2e-16 90.1 81 60.5
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 1.6e-16 89.7 91 56.0
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.6e-16 89.7 82 62.2
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 3.6e-16 88.6 83 56.6
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 6.2e-16 87.8 93 57.0
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 6.2e-16 87.8 75 65.3
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 6.2e-16 87.8 84 58.3
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 6.2e-16 87.8 87 56.3
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 6.2e-16 87.8 75 62.7
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 1.1e-15 87.0 83 57.8
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 1.1e-15 87.0 80 62.5
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.1e-15 87.0 88 55.7
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.1e-15 87.0 81 61.7
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.4e-15 86.7 83 55.4
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 3.1e-15 85.5 85 57.6
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 3.1e-15 85.5 91 53.8
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 4.0e-15 85.1 95 52.6
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 5.2e-15 84.7 78 59.0
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 1.2e-14 83.6 86 58.1
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 2.0e-14 82.8 75 61.3
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 2.6e-14 82.4 81 58.0
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 4.4e-14 81.6 74 59.5
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 4.4e-14 81.6 92 50.0
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 5.8e-14 81.3 84 54.8
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 5.8e-14 81.3 75 58.7
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 5.8e-14 81.3 84 56.0
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 7.5e-14 80.9 75 58.7
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 7.5e-14 80.9 90 50.0
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 7.5e-14 80.9 82 56.1
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 1.3e-13 80.1 82 54.9
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.3e-13 80.1 91 51.6
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.7e-13 79.7 75 57.3
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 1.7e-13 79.7 77 57.1
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.7e-13 79.7 83 55.4
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 1.7e-13 79.7 75 56.0
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 2.2e-13 79.3 84 54.8
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 4.9e-13 78.2 84 53.6
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 4.9e-13 78.2 84 53.6
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 4.9e-13 78.2 75 56.0
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 4.9e-13 78.2 75 61.3
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 6.4e-13 77.8 72 58.3
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 6.4e-13 77.8 83 51.8
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 8.3e-13 77.4 89 53.9
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 8.3e-13 77.4 90 54.4
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 8.3e-13 77.4 82 52.4
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.1e-12 77.0 75 54.7
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 1.1e-12 77.0 72 58.3
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.1e-12 77.0 89 53.9
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.1e-12 77.0 78 59.0
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.4e-12 76.6 76 57.9
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.4e-12 76.6 89 52.8
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 1.9e-12 76.3 86 48.8
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 1.9e-12 76.3 89 53.9
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.9e-12 76.3 87 54.0
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.9e-12 76.3 80 51.2
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.9e-12 76.3 80 51.2
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.9e-12 76.3 80 58.8
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 1.9e-12 76.3 74 55.4
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 2.4e-12 75.9 75 54.7
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 2.4e-12 75.9 94 52.1
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 2.4e-12 75.9 75 54.7
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 3.2e-12 75.5 92 47.8
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 3.2e-12 75.5 90 54.4
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 3.2e-12 75.5 84 52.4
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 4.1e-12 75.1 82 54.9
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 4.1e-12 75.1 90 52.2
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 4.1e-12 75.1 80 51.2
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 5.4e-12 74.7 81 51.9
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 7.1e-12 74.3 82 51.2
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 7.1e-12 74.3 74 56.8
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 9.2e-12 73.9 83 48.2
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 1.2e-11 73.6 75 50.7
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.2e-11 73.6 88 47.7
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.2e-11 73.6 74 58.1
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 1.2e-11 73.6 71 62.0
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.6e-11 73.2 91 48.4
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 1.6e-11 73.2 82 50.0
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 2.7e-11 72.4 84 51.2
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 3.5e-11 72.0 87 51.7
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 4.6e-11 71.6 78 52.6
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 6.0e-11 71.2 78 52.6
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 6.0e-11 71.2 78 52.6
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 6.0e-11 71.2 75 50.7
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 7.8e-11 70.9 78 56.4
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 1.0e-10 70.5 78 52.6
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 1.3e-10 70.1 84 48.8
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 1.3e-10 70.1 87 44.8
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.3e-10 70.1 72 54.2
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 1.7e-10 69.7 91 42.9
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.7e-10 69.7 75 52.0
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.7e-10 69.7 75 52.0
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 2.3e-10 69.3 75 52.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 3.0e-10 68.9 71 46.5
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 5.1e-10 68.2 72 54.2
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 5.1e-10 68.2 82 48.8
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 6.6e-10 67.8 79 50.6
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 6.6e-10 67.8 79 50.6
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 6.6e-10 67.8 79 50.6
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.5e-09 66.6 79 49.4
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.9e-09 66.2 89 49.4
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 2.5e-09 65.9 79 49.4
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 2.5e-09 65.9 79 49.4
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 7.3e-09 64.3 75 46.7
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 9.5e-09 63.9 76 51.3


User provided reference genes

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