Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30852 Sequoiadendron giganteum HOM05D000483 ORTHO05D000158 3.5e-106 388.3 190 100.0
CSS0018521 Camellia sinensis var. sinensis HOM05D000483 ORTHO05D000158 4.2e-11 72.4 136 36.8
HanXRQChr13g0413111 Helianthus annuus HOM05D000483 ORTHO05D000158 4.2e-11 72.4 145 36.6
SEGI_17856 Sequoiadendron giganteum HOM05D000483 ORTHO05D000158 7.2e-11 71.6 143 37.8
Eucgr.H01151 Eucalyptus grandis HOM05D000483 ORTHO05D000158 3.6e-10 69.3 140 37.1
arahy.Tifrunner.gnm1.ann1.3Q6I1N Arachis hypogaea HOM05D000483 ORTHO05D000158 7.9e-10 68.2 130 36.2
TPR.G9607 Trifolium pratense HOM05D000483 ORTHO05D000158 7.9e-10 68.2 135 35.6
Ah.15g093290 Amaranthus hybridus HOM05D000483 ORTHO05D000158 1.0e-09 67.8 143 35.0
MSTRG.21733 Avicennia marina HOM05D000483 ORTHO05D000158 1.0e-09 67.8 141 33.3
Lj2A1193G32 Lonicera japonica HOM05D000483 ORTHO05D000158 1.4e-09 67.4 139 35.3
Lalb_Chr09g0330171 Lupinus albus HOM05D000483 ORTHO05D000158 1.4e-09 67.4 136 35.3
Actinidia00015 Actinidia chinensis HOM05D000483 ORTHO05D000158 1.8e-09 67.0 129 38.0
Cpa.g.sc9.227 Carica papaya HOM05D000483 ORTHO05D000158 1.8e-09 67.0 143 31.5
CsaV3_7G029200 Cucumis sativus L. HOM05D000483 ORTHO05D000158 1.8e-09 67.0 142 35.9
PGR044G0245 Punica granatum HOM05D000483 ORTHO05D000158 1.8e-09 67.0 136 34.6
RcHm_v2.0_Chr6g0293841 Rosa chinensis HOM05D000483 ORTHO05D000158 1.8e-09 67.0 141 33.3
PGSC0003DMG400024035 Solanum tuberosum HOM05D000483 ORTHO05D000158 1.8e-09 67.0 138 36.2
EL10Ac1g01932 Beta vulgaris HOM05D000483 ORTHO05D000158 2.3e-09 66.6 140 35.0
Ca_09154_v3 Cicer arietinum L. HOM05D000483 ORTHO05D000158 2.3e-09 66.6 145 35.2
MELO3C016007.2 Cucumis melo HOM05D000483 ORTHO05D000158 3.0e-09 66.2 142 35.2
Thecc.01G298900 Theobroma cacao HOM05D000483 ORTHO05D000158 3.0e-09 66.2 147 33.3
HanXRQChr10g0284501 Helianthus annuus HOM05D000483 ORTHO05D000158 3.9e-09 65.9 135 33.3
SGA_v2.0_scaffold36G14342 Striga asiatica HOM05D000483 ORTHO05D000158 3.9e-09 65.9 132 34.8
Duzib138G0865 Durio zibethinus HOM05D000483 ORTHO05D000158 5.1e-09 65.5 145 33.1
Lsat_1_v5_gn_5_191161 Lactuca sativa HOM05D000483 ORTHO05D000158 5.1e-09 65.5 139 35.3
Sed0017202 Sechium edule HOM05D000483 ORTHO05D000158 5.1e-09 65.5 142 33.1
Actinidia32222 Actinidia chinensis HOM05D000483 ORTHO05D000158 6.7e-09 65.1 141 34.0
MSTRG.18157 Avicennia marina HOM05D000483 ORTHO05D000158 6.7e-09 65.1 141 34.8
FAN27G2739 Fragaria x ananassa HOM05D000483 ORTHO05D000158 6.7e-09 65.1 141 31.2
TAR365G0550 Trochodendron aralioides HOM05D000483 ORTHO05D000158 6.7e-09 65.1 141 32.6
Nitab4.5_0009558g0010 Nicotiana tabacum HOM05D000483 ORTHO05D000158 8.8e-09 64.7 141 36.2
Prupe.8G260100 Prunus persica HOM05D000483 ORTHO05D000158 8.8e-09 64.7 139 34.5
GSVIVG01027994001 Vitis vinifera HOM05D000483 ORTHO05D000158 8.8e-09 64.7 141 33.3
Atru.chr5.1158 Acer truncatum HOM05D000483 ORTHO05D000158 1.1e-08 64.3 138 33.3
MSTRG.18159 Avicennia marina HOM05D000483 ORTHO05D000158 1.1e-08 64.3 139 32.4
CiPaw.07G107600 Carya illinoinensis HOM05D000483 ORTHO05D000158 1.1e-08 64.3 141 34.8
Dinv33047 Davidia involucrata HOM05D000483 ORTHO05D000158 1.1e-08 64.3 141 34.0
ClCG09G005920 Citrullus lanatus HOM05D000483 ORTHO05D000158 1.5e-08 63.9 142 34.5
Ciclev10029382m.g Citrus clementina HOM05D000483 ORTHO05D000158 1.5e-08 63.9 161 31.1
Lj1g0010076 Lotus japonicus HOM05D000483 ORTHO05D000158 1.5e-08 63.9 138 34.8
MD16G1167500 Malus domestica HOM05D000483 ORTHO05D000158 1.5e-08 63.9 138 32.6
VMungo0251G2649 Vigna mungo HOM05D000483 ORTHO05D000158 1.5e-08 63.9 134 33.6
VMungo1383G0469 Vigna mungo HOM05D000483 ORTHO05D000158 1.5e-08 63.9 133 36.8
CiPaw.07G107500 Carya illinoinensis HOM05D000483 ORTHO05D000158 2.0e-08 63.5 147 34.0
AUR62033121 Chenopodium quinoa HOM05D000483 ORTHO05D000158 2.0e-08 63.5 139 33.1
Dinv19700 Davidia involucrata HOM05D000483 ORTHO05D000158 2.0e-08 63.5 147 34.0
Migut.D00209 Erythranthe guttata HOM05D000483 ORTHO05D000158 2.0e-08 63.5 142 33.8
Gorai.004G089400 Gossypium raimondii HOM05D000483 ORTHO05D000158 2.0e-08 63.5 138 32.6
MD11G1311000 Malus domestica HOM05D000483 ORTHO05D000158 2.0e-08 63.5 136 35.3
Medtr7g108830 Medicago truncatula HOM05D000483 ORTHO05D000158 2.0e-08 63.5 143 34.3
Medtr8g058620 Medicago truncatula HOM05D000483 ORTHO05D000158 2.0e-08 63.5 143 34.3
AUR62008647 Chenopodium quinoa HOM05D000483 ORTHO05D000158 2.6e-08 63.2 139 33.1
Cc09_g05490 Coffea canephora HOM05D000483 ORTHO05D000158 2.6e-08 63.2 143 31.5
PGR044G1904 Punica granatum HOM05D000483 ORTHO05D000158 2.6e-08 63.2 147 30.6
COL.COLO4_23357 Corchorus olitorius HOM05D000483 ORTHO05D000158 3.3e-08 62.8 141 32.6
Peaxi162Scf00140g01119 Petunia axillaris HOM05D000483 ORTHO05D000158 3.3e-08 62.8 137 33.6
TAR622G0863 Trochodendron aralioides HOM05D000483 ORTHO05D000158 3.3e-08 62.8 129 38.8
Cfa005926 Carpinus fangiana HOM05D000483 ORTHO05D000158 4.4e-08 62.4 145 31.7
Cfa015395 Carpinus fangiana HOM05D000483 ORTHO05D000158 4.4e-08 62.4 131 36.6
Gohir.D08G085000 Gossypium hirsutum HOM05D000483 ORTHO05D000158 4.4e-08 62.4 138 32.6
Nitab4.5_0004367g0010 Nicotiana tabacum HOM05D000483 ORTHO05D000158 4.4e-08 62.4 144 33.3
Phvul.001G206900 Phaseolus vulgaris HOM05D000483 ORTHO05D000158 4.4e-08 62.4 140 37.1
Sc24g0003810 Simmondsia chinensis HOM05D000483 ORTHO05D000158 4.4e-08 62.4 140 32.9
VMungo0720G1469 Vigna mungo HOM05D000483 ORTHO05D000158 4.4e-08 62.4 137 34.3
Sc18g0003970 Simmondsia chinensis HOM05D000483 ORTHO05D000158 5.7e-08 62.0 141 31.9
Haze_01191 Corylus avellana HOM05D000483 ORTHO05D000158 9.7e-08 61.2 131 36.6
FAN15G3300 Fragaria x ananassa HOM05D000483 ORTHO05D000158 9.7e-08 61.2 141 29.1
Nn4g25813 Nelumbo nucifera HOM05D000483 ORTHO05D000158 9.7e-08 61.2 141 31.9
QL12p027556 Quercus lobata HOM05D000483 ORTHO05D000158 9.7e-08 61.2 145 32.4
MSTRG.18160 Avicennia marina HOM05D000483 ORTHO05D000158 1.3e-07 60.8 139 31.7
Haze_04915 Corylus avellana HOM05D000483 ORTHO05D000158 1.3e-07 60.8 145 32.4
Glyma.13G331200 Glycine max HOM05D000483 ORTHO05D000158 1.3e-07 60.8 139 36.7
Phvul.002G333200 Phaseolus vulgaris HOM05D000483 ORTHO05D000158 1.3e-07 60.8 134 33.6
Potri.014G130100 Populus trichocarpa HOM05D000483 ORTHO05D000158 1.3e-07 60.8 142 32.4
QL12p027539 Quercus lobata HOM05D000483 ORTHO05D000158 1.3e-07 60.8 141 32.6
Solyc06g084540.3 Solanum lycopersicum HOM05D000483 ORTHO05D000158 1.3e-07 60.8 138 34.1
Sopen06g035920 Solanum pennellii HOM05D000483 ORTHO05D000158 1.3e-07 60.8 138 34.1
Ah.15g093280 Amaranthus hybridus HOM05D000483 ORTHO05D000158 1.7e-07 60.5 135 35.6
CSS0042643 Camellia sinensis var. sinensis HOM05D000483 ORTHO05D000158 1.7e-07 60.5 137 32.1
Dinv33048 Davidia involucrata HOM05D000483 ORTHO05D000158 1.7e-07 60.5 141 34.0
MD11G1312900 Malus domestica HOM05D000483 ORTHO05D000158 1.7e-07 60.5 132 34.1
PGR044G1207 Punica granatum HOM05D000483 ORTHO05D000158 1.7e-07 60.5 136 33.1
Actinidia24343 Actinidia chinensis HOM05D000483 ORTHO05D000158 2.2e-07 60.1 141 31.2
CSS0037568 Camellia sinensis var. sinensis HOM05D000483 ORTHO05D000158 2.2e-07 60.1 134 31.3
CSS0038911 Camellia sinensis var. sinensis HOM05D000483 ORTHO05D000158 2.2e-07 60.1 134 31.3
FAN20G2938 Fragaria x ananassa HOM05D000483 ORTHO05D000158 2.2e-07 60.1 135 30.4
Psat3g022240 Pisum sativum HOM05D000483 ORTHO05D000158 2.2e-07 60.1 145 33.1
Potri.002G205275 Populus trichocarpa HOM05D000483 ORTHO05D000158 2.2e-07 60.1 140 32.1
PGR119G1092 Punica granatum HOM05D000483 ORTHO05D000158 2.2e-07 60.1 132 31.8
QL06p009074 Quercus lobata HOM05D000483 ORTHO05D000158 2.2e-07 60.1 137 32.8
Rhsim01G0284300 Rhododendron simsii HOM05D000483 ORTHO05D000158 2.2e-07 60.1 141 34.0
MELO3C016005.2 Cucumis melo HOM05D000483 ORTHO05D000158 2.8e-07 59.7 133 34.6
Manes.01G218100 Manihot esculenta HOM05D000483 ORTHO05D000158 2.8e-07 59.7 143 32.2
unitig_749.g13748 Utricularia gibba HOM05D000483 ORTHO05D000158 2.8e-07 59.7 137 35.0
GSVIVG01027993001 Vitis vinifera HOM05D000483 ORTHO05D000158 2.8e-07 59.7 147 32.0
MSTRG.18158 Avicennia marina HOM05D000483 ORTHO05D000158 3.7e-07 59.3 137 31.4
AUR62008645 Chenopodium quinoa HOM05D000483 ORTHO05D000158 3.7e-07 59.3 127 33.1
ECA248G0587 Erigeron canadensis HOM05D000483 ORTHO05D000158 3.7e-07 59.3 133 33.8
Gohir.A08G075300 Gossypium hirsutum HOM05D000483 ORTHO05D000158 3.7e-07 59.3 138 31.9
Manes.05G062900 Manihot esculenta HOM05D000483 ORTHO05D000158 3.7e-07 59.3 142 34.5
Hund18143 Selenicereus undatus HOM05D000483 ORTHO05D000158 3.7e-07 59.3 138 31.9
COL.COLO4_23358 Corchorus olitorius HOM05D000483 ORTHO05D000158 4.8e-07 58.9 147 32.7
Glyma.19G211000 Glycine max HOM05D000483 ORTHO05D000158 4.8e-07 58.9 133 33.8
MSTRG.21626 Avicennia marina HOM05D000483 ORTHO05D000158 6.3e-07 58.5 137 31.4
CANSAT25G1200 Cannabis sativa HOM05D000483 ORTHO05D000158 6.3e-07 58.5 143 31.5
CANSAT25G3623 Cannabis sativa HOM05D000483 ORTHO05D000158 6.3e-07 58.5 143 31.5
Ciclev10030179m.g Citrus clementina HOM05D000483 ORTHO05D000158 6.3e-07 58.5 141 30.5
ECA247G0939 Erigeron canadensis HOM05D000483 ORTHO05D000158 6.3e-07 58.5 134 34.3
FvH4_2g25600 Fragaria vesca HOM05D000483 ORTHO05D000158 6.3e-07 58.5 141 28.4
FAN24G2111 Fragaria x ananassa HOM05D000483 ORTHO05D000158 6.3e-07 58.5 141 28.4
PGR119G1152 Punica granatum HOM05D000483 ORTHO05D000158 6.3e-07 58.5 139 30.9
PGR119G2549 Punica granatum HOM05D000483 ORTHO05D000158 6.3e-07 58.5 139 30.9
Sabra14G0096700 Salix brachista HOM05D000483 ORTHO05D000158 6.3e-07 58.5 146 30.1
GSVIVG01017725001 Vitis vinifera HOM05D000483 ORTHO05D000158 6.3e-07 58.5 138 32.6
Zm00001eb410170 Zea mays HOM05D000483 ORTHO05D000158 6.3e-07 58.5 137 34.3
arahy.Tifrunner.gnm1.ann1.7A33FI Arachis hypogaea HOM05D000483 ORTHO05D000158 8.2e-07 58.2 129 32.6
CDE05G1596 Ceratophyllum demersum HOM05D000483 ORTHO05D000158 8.2e-07 58.2 128 35.2
Peaxi162Scf00399g00918 Petunia axillaris HOM05D000483 ORTHO05D000158 8.2e-07 58.2 141 33.3
TWI23G0712 Tripterygium wilfordii HOM05D000483 ORTHO05D000158 8.2e-07 58.2 144 31.9
ECA247G2820 Erigeron canadensis HOM05D000483 ORTHO05D000158 1.1e-06 57.8 127 31.5
PSO210G5141 Papaver somniferum HOM05D000483 ORTHO05D000158 1.1e-06 57.8 142 28.9
Hund05419 Selenicereus undatus HOM05D000483 ORTHO05D000158 1.1e-06 57.8 134 33.6
Aqoxy5G00745 Aquilegia oxysepala HOM05D000483 ORTHO05D000158 1.4e-06 57.4 136 32.4
arahy.Tifrunner.gnm1.ann1.4Z93EL Arachis hypogaea HOM05D000483 ORTHO05D000158 1.4e-06 57.4 145 33.1
arahy.Tifrunner.gnm1.ann1.QAN1HW Arachis hypogaea HOM05D000483 ORTHO05D000158 1.4e-06 57.4 145 33.1
CDE11G0465 Ceratophyllum demersum HOM05D000483 ORTHO05D000158 1.4e-06 57.4 130 34.6
Thhalv10001666m.g Eutrema salsugineum HOM05D000483 ORTHO05D000158 1.4e-06 57.4 142 33.1
MBI11_g22248_MAGBIO Magnolia biondii HOM05D000483 ORTHO05D000158 1.4e-06 57.4 132 34.1
Nn3g21465 Nelumbo nucifera HOM05D000483 ORTHO05D000158 1.4e-06 57.4 140 31.4
Oeu011453.1 Olea europaea HOM05D000483 ORTHO05D000158 1.4e-06 57.4 137 32.8
PGR004G2202 Punica granatum HOM05D000483 ORTHO05D000158 1.4e-06 57.4 141 33.3
SHI00259 Sapria himalayana HOM05D000483 ORTHO05D000158 1.4e-06 57.4 136 33.8
vmacro15000 Vaccinium macrocarpon HOM05D000483 ORTHO05D000158 1.4e-06 57.4 141 29.8
Ah.08g213110 Amaranthus hybridus HOM05D000483 ORTHO05D000158 1.8e-06 57.0 143 31.5
EL10Ac7g17456 Beta vulgaris HOM05D000483 ORTHO05D000158 1.8e-06 57.0 138 31.2
Eucgr.K03471 Eucalyptus grandis HOM05D000483 ORTHO05D000158 1.8e-06 57.0 139 30.2
Nitab4.5_0005805g0030 Nicotiana tabacum HOM05D000483 ORTHO05D000158 1.8e-06 57.0 140 34.3
PSO832G0152 Papaver somniferum HOM05D000483 ORTHO05D000158 1.8e-06 57.0 140 32.1
ATR0796G142 Amborella trichopoda HOM05D000483 ORTHO05D000158 2.4e-06 56.6 130 34.6
CAN.G1209.28 Capsicum annuum HOM05D000483 ORTHO05D000158 2.4e-06 56.6 141 32.6
Oeu035679.1 Olea europaea HOM05D000483 ORTHO05D000158 2.4e-06 56.6 134 32.8
Solyc05g054270.2 Solanum lycopersicum HOM05D000483 ORTHO05D000158 2.4e-06 56.6 134 31.3
unitig_26.g10169 Utricularia gibba HOM05D000483 ORTHO05D000158 2.4e-06 56.6 132 32.6
Aqoxy2G02963 Aquilegia oxysepala HOM05D000483 ORTHO05D000158 3.1e-06 56.2 137 32.1
Ciclev10007124m.g Citrus clementina HOM05D000483 ORTHO05D000158 3.1e-06 56.2 145 32.4
Dinv44373 Davidia involucrata HOM05D000483 ORTHO05D000158 3.1e-06 56.2 133 31.6
Nn2g15902 Nelumbo nucifera HOM05D000483 ORTHO05D000158 3.1e-06 56.2 141 34.0
Os12g0552500 Oryza sativa ssp. japonica HOM05D000483 ORTHO05D000158 3.1e-06 56.2 134 32.1
Peaxi162Scf01533g00023 Petunia axillaris HOM05D000483 ORTHO05D000158 3.1e-06 56.2 134 32.1
QL12p027439 Quercus lobata HOM05D000483 ORTHO05D000158 3.1e-06 56.2 144 30.6
SGA_v2.0_scaffold198G41150 Striga asiatica HOM05D000483 ORTHO05D000158 3.1e-06 56.2 139 32.4
MD03G1287300 Malus domestica HOM05D000483 ORTHO05D000158 4.1e-06 55.8 136 32.4
Nitab4.5_0000960g0020 Nicotiana tabacum HOM05D000483 ORTHO05D000158 4.1e-06 55.8 132 32.6
PSO210G7188 Papaver somniferum HOM05D000483 ORTHO05D000158 4.1e-06 55.8 140 31.4
Prupe.1G135000 Prunus persica HOM05D000483 ORTHO05D000158 4.1e-06 55.8 128 32.0
Sabra02G0154000 Salix brachista HOM05D000483 ORTHO05D000158 4.1e-06 55.8 140 32.1
PGSC0003DMG400014628 Solanum tuberosum HOM05D000483 ORTHO05D000158 4.1e-06 55.8 136 31.6
Aa31sc180G10 Aethionema arabicum HOM05D000483 ORTHO05D000158 5.3e-06 55.5 143 33.6
CsaV3_3G014720 Cucumis sativus L. HOM05D000483 ORTHO05D000158 5.3e-06 55.5 132 31.8
MD03G1287100 Malus domestica HOM05D000483 ORTHO05D000158 5.3e-06 55.5 139 31.7
Sopen05g032760 Solanum pennellii HOM05D000483 ORTHO05D000158 5.3e-06 55.5 137 31.4
CAN.G1715.12 Capsicum annuum HOM05D000483 ORTHO05D000158 7.0e-06 55.1 141 30.5
Cpa.g.sc1597.2 Carica papaya HOM05D000483 ORTHO05D000158 7.0e-06 55.1 132 33.3
Nitab4.5_0001904g0040 Nicotiana tabacum HOM05D000483 ORTHO05D000158 7.0e-06 55.1 139 31.7
Nitab4.5_0002470g0080 Nicotiana tabacum HOM05D000483 ORTHO05D000158 7.0e-06 55.1 141 32.6
Lj5g0012080 Lotus japonicus HOM05D000483 ORTHO05D000158 9.1e-06 54.7 139 30.9
MBI19_g13198_MAGBIO Magnolia biondii HOM05D000483 ORTHO05D000158 9.1e-06 54.7 140 30.0
Potri.013G009800 Populus trichocarpa HOM05D000483 ORTHO05D000158 9.1e-06 54.7 148 31.8


User provided reference genes

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