Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 0.0e+00 1380.9 699 100.0
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 5.7e-138 495.7 576 50.3
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 1.4e-131 474.6 583 49.7
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 2.2e-126 457.2 563 49.4
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 1.9e-125 454.1 583 48.0
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 4.2e-125 453.0 575 47.1
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 7.2e-125 452.2 567 48.1
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 2.1e-124 450.7 589 46.5
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 1.5e-122 444.5 565 48.3
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 2.0e-122 444.1 581 46.1
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 2.0e-122 444.1 580 47.2
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 2.6e-122 443.7 573 46.4
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 1.7e-121 441.0 563 47.4
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 4.8e-121 439.5 583 45.8
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 6.3e-121 439.1 561 48.1
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 1.4e-120 438.0 624 44.2
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 1.8e-120 437.6 583 45.6
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 3.1e-120 436.8 588 45.9
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 3.1e-120 436.8 564 48.6
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 1.6e-119 434.5 567 46.7
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 2.6e-119 433.7 562 46.1
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 2.6e-119 433.7 565 48.3
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 3.5e-119 433.3 573 46.8
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 1.0e-118 431.8 583 46.3
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 1.0e-118 431.8 564 48.2
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 1.7e-118 431.0 570 46.3
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 5.0e-118 429.5 566 45.9
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 6.5e-118 429.1 589 45.2
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 8.5e-118 428.7 566 46.3
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 1.5e-117 427.9 572 46.2
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 1.9e-117 427.6 563 46.0
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.9e-117 427.6 563 46.0
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 1.2e-116 424.9 562 46.8
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 1.6e-116 424.5 570 47.7
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 2.1e-116 424.1 585 47.2
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 2.7e-116 423.7 582 45.9
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 4.7e-116 422.9 562 46.3
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 6.1e-116 422.5 554 46.2
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 6.1e-116 422.5 570 46.7
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 1.4e-115 421.4 568 46.1
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 1.4e-115 421.4 568 44.5
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 1.8e-115 421.0 564 45.7
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 1.8e-115 421.0 561 45.8
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 2.3e-115 420.6 570 46.0
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 4.0e-115 419.9 570 45.1
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 4.0e-115 419.9 568 46.0
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 4.0e-115 419.9 572 47.0
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 5.2e-115 419.5 555 45.8
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 5.2e-115 419.5 563 45.8
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 5.2e-115 419.5 563 46.9
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 6.7e-115 419.1 568 45.8
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 6.7e-115 419.1 584 46.1
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 8.8e-115 418.7 563 44.9
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 1.2e-114 418.3 563 46.5
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 1.5e-114 417.9 570 47.4
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 2.6e-114 417.2 570 45.4
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 3.3e-114 416.8 615 44.2
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 3.3e-114 416.8 598 44.6
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 4.4e-114 416.4 562 45.6
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 4.4e-114 416.4 577 44.7
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 9.7e-114 415.2 559 43.6
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 2.2e-113 414.1 577 45.4
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 2.8e-113 413.7 570 45.4
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 3.7e-113 413.3 560 43.9
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 3.7e-113 413.3 571 45.7
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.7e-113 413.3 585 44.4
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 4.8e-113 412.9 583 44.9
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 6.3e-113 412.5 627 43.2
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.3e-113 412.5 582 45.0
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.4e-112 411.4 565 45.3
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 2.4e-112 410.6 574 44.9
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 7.0e-112 409.1 582 44.7
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 1.2e-111 408.3 592 43.4
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 1.6e-111 407.9 579 45.3
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 2.0e-111 407.5 594 44.9
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 2.0e-111 407.5 566 45.4
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 3.5e-111 406.8 569 45.0
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 3.5e-111 406.8 611 42.4
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 5.9e-111 406.0 531 46.1
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.3e-110 404.8 592 44.1
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 1.7e-110 404.4 579 44.2
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 1.7e-110 404.4 580 43.1
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 1.7e-110 404.4 564 45.9
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.7e-110 404.4 631 42.0
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 3.8e-110 403.3 592 43.9
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 5.0e-110 402.9 587 44.1
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 6.5e-110 402.5 607 43.7
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 8.5e-110 402.1 584 44.7
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 8.5e-110 402.1 571 44.8
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.1e-109 401.7 559 42.9
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 1.5e-109 401.4 497 49.5
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 1.5e-109 401.4 588 43.9
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 4.2e-109 399.8 587 43.8
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 2.7e-108 397.1 575 43.7
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 3.6e-108 396.7 591 44.7
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 3.6e-108 396.7 591 43.7
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 6.1e-108 396.0 565 45.1
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 1.4e-107 394.8 494 49.2
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 5.2e-107 392.9 558 43.9
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 8.8e-107 392.1 575 43.7
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 2.0e-106 391.0 570 45.1
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 7.5e-106 389.0 566 43.5
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 1.3e-105 388.3 503 45.7
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 1.8e-104 384.4 578 42.7
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 7.0e-104 382.5 573 41.5
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 7.0e-104 382.5 490 45.7
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.6e-103 381.3 601 42.8
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 3.5e-103 380.2 565 43.7
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 3.5e-103 380.2 579 43.4
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.8e-102 376.7 581 42.7
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 5.0e-102 376.3 568 43.7
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 8.6e-102 375.6 562 43.6
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 8.6e-102 375.6 575 42.4
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 1.9e-101 374.4 581 42.0
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 4.2e-101 373.2 541 42.7
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 1.6e-100 371.3 563 43.0
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 3.6e-100 370.2 593 41.5
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.0e-99 368.6 650 39.2
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 4.0e-99 366.7 560 42.5
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 5.7e-98 362.8 549 43.0
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 5.7e-98 362.8 596 40.8
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 5.4e-96 356.3 587 40.0
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 7.8e-95 352.4 593 41.1
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 1.3e-94 351.7 494 46.4
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.0e-91 342.0 563 41.4
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 3.1e-91 340.5 574 39.4
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 2.2e-89 334.3 521 41.5
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 3.2e-88 330.5 607 38.7
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 9.2e-88 328.9 584 39.4
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 4.6e-87 326.6 448 46.4
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 2.3e-86 324.3 603 38.6
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 3.3e-85 320.5 458 44.5
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.6e-84 317.0 512 41.0
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 1.9e-80 304.7 490 41.2
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 9.2e-80 302.4 571 37.5
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 2.8e-76 290.8 560 37.0
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 5.2e-75 286.6 281 58.7
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.5e-74 285.0 296 56.4
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 2.6e-74 284.3 623 35.2
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 5.8e-74 283.1 582 36.6
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 9.9e-74 282.3 511 38.7
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 2.9e-73 280.8 455 39.3
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.1e-72 278.9 508 39.0
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.4e-72 278.5 612 36.1
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 3.5e-71 273.9 503 39.2
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.9e-70 270.4 278 55.8
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 8.6e-70 269.2 416 40.4
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 2.5e-69 267.7 226 65.0
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 2.8e-68 264.2 320 49.4
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.3e-62 245.4 447 38.7
SEGI_14307 Sequoiadendron giganteum HOM05D002699 ORTHO05D002931 1.1e-56 225.7 138 82.6
SEGI_24714 Sequoiadendron giganteum HOM05D002699 ORTHO05D002931 1.1e-56 225.7 138 82.6
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 1.3e-49 202.2 493 33.1
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 2.4e-48 198.0 382 33.8
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 9.6e-45 186.0 249 49.4
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 6.9e-43 179.9 441 34.5
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 1.1e-35 156.0 137 65.7
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 3.8e-33 147.5 552 29.7
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 2.3e-30 138.3 192 37.5
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 3.0e-30 137.9 225 36.9
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.0e-26 125.2 228 35.5
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 7.7e-26 123.2 233 35.6
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 1.2e-23 115.9 262 32.8
SEGI_02789 Sequoiadendron giganteum HOM05D004724 ORTHO05D005734 2.7e-23 114.8 92 62.0
SEGI_06285 Sequoiadendron giganteum HOM05D001434 ORTHO05D004586 1.7e-20 105.5 99 60.6
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 5.3e-19 100.5 61 80.3
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 1.5e-18 99.0 135 48.1
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 1.7e-17 95.5 107 44.9
SEGI_33898 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.4e-16 92.4 132 40.2
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 1.4e-14 85.9 80 51.2
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 1.1e-13 82.8 50 70.0
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.5e-13 82.4 51 66.7
SEGI_09038 Sequoiadendron giganteum HOM05D018674 ORTHO05D020861 2.2e-12 78.6 49 79.6
SEGI_33128 Sequoiadendron giganteum HOM05D018674 ORTHO05D020861 3.1e-11 74.7 100 41.0
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 3.5e-10 71.2 53 66.0
SEGI_02713 Sequoiadendron giganteum HOM05D009513 ORTHO05D004505 3.5e-10 71.2 108 38.0
SEGI_15667 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.9e-08 65.5 117 39.3
SEGI_05849 Sequoiadendron giganteum HOM05D005270 ORTHO05D006239 2.5e-08 65.1 106 34.9


User provided reference genes

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