Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22370 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 4.9e-210 734.2 360 100.0
SEGI_30633 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 4.9e-210 734.2 360 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis HOM05D005395 ORTHO05D006352 1.2e-75 287.7 350 43.1
Mapoly0009s0015 Marchantia polymorpha HOM05D005395 ORTHO05D006352 7.8e-75 285.0 349 43.6
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 1.3e-69 267.7 340 44.1
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 2.2e-69 266.9 347 43.5
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 4.2e-68 262.7 351 44.4
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 2.7e-67 260.0 345 43.2
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 3.0e-66 256.5 357 39.2
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 8.7e-66 255.0 352 40.3
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 5.6e-65 252.3 347 42.1
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 7.3e-65 251.9 345 43.2
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 1.6e-64 250.8 345 41.4
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 4.0e-63 246.1 358 38.3
Pp3c1_42700 Physcomitrium patens HOM05D005395 ORTHO05D006352 5.3e-63 245.7 342 42.4
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 9.0e-63 245.0 348 41.1
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 1.2e-62 244.6 325 42.8
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 1.5e-62 244.2 345 40.9
Atru.chr11.731 Acer truncatum HOM05D005395 ORTHO05D006352 3.4e-62 243.0 357 38.9
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 9.9e-62 241.5 345 40.3
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 1.3e-61 241.1 345 40.3
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 1.7e-61 240.7 343 42.3
QL02p026227 Quercus lobata HOM05D005395 ORTHO05D006352 1.7e-61 240.7 345 40.0
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 6.4e-61 238.8 343 40.5
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 6.4e-61 238.8 345 41.2
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 1.1e-60 238.0 328 42.7
Manes.10G091300 Manihot esculenta HOM05D005395 ORTHO05D006352 1.4e-60 237.7 350 40.9
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 1.4e-60 237.7 352 39.5
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.9e-60 237.3 345 40.0
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.9e-60 237.3 345 40.0
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 2.4e-60 236.9 345 40.6
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 2.4e-60 236.9 356 39.3
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 3.2e-60 236.5 345 39.4
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 1.2e-59 234.6 351 40.2
Sopen01g034170 Solanum pennellii HOM05D005395 ORTHO05D006352 1.2e-59 234.6 345 40.0
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 2.1e-59 233.8 343 38.8
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 2.1e-59 233.8 360 39.2
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 2.7e-59 233.4 347 39.5
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 2.7e-59 233.4 345 39.1
QL12p011919 Quercus lobata HOM05D005395 ORTHO05D006352 2.7e-59 233.4 346 39.9
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 3.5e-59 233.0 352 38.9
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 7.9e-59 231.9 345 39.4
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 1.3e-58 231.1 348 39.7
Solyc01g087095.2 Solanum lycopersicum HOM05D005395 ORTHO05D006352 1.3e-58 231.1 345 39.1
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 1.8e-58 230.7 345 39.4
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 1.8e-58 230.7 354 39.0
Lalb_Chr13g0291151 Lupinus albus HOM05D005395 ORTHO05D006352 2.3e-58 230.3 354 39.3
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 3.0e-58 229.9 345 40.3
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 3.9e-58 229.6 359 37.6
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 8.7e-58 228.4 352 38.9
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 3.3e-57 226.5 355 39.4
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 9.6e-57 224.9 345 39.1
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 1.3e-56 224.6 336 39.0
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 1.6e-56 224.2 346 39.3
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 2.1e-56 223.8 344 39.2
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 3.7e-56 223.0 346 40.2
SHI19148 Sapria himalayana HOM05D005395 ORTHO05D006352 3.7e-56 223.0 321 41.1
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 3.7e-56 223.0 334 39.2
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 1.4e-55 221.1 334 38.9
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 1.8e-55 220.7 346 37.6
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 2.4e-55 220.3 343 38.5
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 3.1e-55 219.9 343 39.7
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 3.1e-55 219.9 345 38.6
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 9.0e-55 218.4 345 38.3
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 4.5e-54 216.1 344 38.1
PGR042G3169 Punica granatum HOM05D005395 ORTHO05D006352 4.5e-54 216.1 345 37.1
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 7.6e-54 215.3 345 36.8
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 9.3e-52 208.4 345 36.2
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 1.2e-51 208.0 333 38.4
TPR.G30923 Trifolium pratense HOM05D005395 ORTHO05D006352 1.6e-51 207.6 352 36.9
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 1.8e-50 204.1 332 36.7
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 6.7e-50 202.2 346 35.8
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 6.7e-50 202.2 194 53.1
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 6.3e-48 195.7 333 36.3
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 2.4e-47 193.7 332 36.1
HPP92_011265 Vanilla planifolia HOM05D005395 ORTHO05D006352 2.4e-47 193.7 182 56.0
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 4.1e-47 193.0 344 35.8
Cpa.g.sc245.16 Carica papaya HOM05D005395 ORTHO05D006352 1.2e-46 191.4 196 49.0
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 5.9e-46 189.1 333 36.3
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 1.0e-45 188.3 334 35.9
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 6.5e-45 185.7 333 36.3
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 7.2e-44 182.2 333 35.4
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 9.3e-44 181.8 333 35.4
AUR62014136 Chenopodium quinoa HOM05D005395 ORTHO05D006352 1.3e-42 177.9 184 48.9
Nitab4.5_0002179g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 5.1e-42 176.0 185 51.4
Thecc.10G136000 Theobroma cacao HOM05D005395 ORTHO05D006352 8.7e-42 175.3 266 41.0
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 2.6e-30 137.1 166 44.0
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 4.5e-30 136.3 280 33.6
Sc04g0005700 Simmondsia chinensis HOM05D005395 ORTHO05D006352 1.3e-29 134.8 252 34.1
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 7.2e-28 129.0 345 29.3
Cre04.g213652 Chlamydomonas reinhardtii HOM05D005395 ORTHO05D006352 4.7e-27 126.3 124 47.6
MCO03G604 Micromonas commoda HOM05D005395 ORTHO05D006352 7.0e-23 112.5 351 25.4
CBR_g45710 Chara braunii HOM05D005395 ORTHO05D006352 2.6e-17 94.0 93 47.3
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 9.7e-17 92.0 232 28.0
PSO384G2197 Papaver somniferum HOM05D005395 ORTHO05D006352 1.9e-12 77.8 64 50.0
Aa31sc690G30 Aethionema arabicum HOM05D005395 ORTHO05D006352 3.4e-09 67.0 89 42.7
Cfa026815 Carpinus fangiana HOM05D005395 ORTHO05D006352 2.0e-06 57.8 44 52.3


User provided reference genes

Program Settings