Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30621 Sequoiadendron giganteum HOM05D005582 ORTHO05D007028 6.3e-128 460.7 219 100.0
SEGI_19987 Sequoiadendron giganteum HOM05D005582 ORTHO05D007028 2.4e-79 299.3 143 100.0
Dinv29525 Davidia involucrata HOM05D005582 ORTHO05D007028 8.5e-24 114.8 104 52.9
MBI18_g09609_MAGBIO Magnolia biondii HOM05D005582 ORTHO05D007028 1.9e-23 113.6 104 51.9
TPR.G26104 Trifolium pratense HOM05D005582 ORTHO05D007028 2.5e-23 113.2 104 54.8
Duzib151G0781 Durio zibethinus HOM05D005582 ORTHO05D007028 4.2e-23 112.5 104 55.8
Duzib151G1162 Durio zibethinus HOM05D005582 ORTHO05D007028 4.2e-23 112.5 104 55.8
Sc25g0001750 Simmondsia chinensis HOM05D005582 ORTHO05D007028 4.2e-23 112.5 104 52.9
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 5.5e-23 112.1 136 46.3
Prupe.1G108200 Prunus persica HOM05D005582 ORTHO05D007028 7.2e-23 111.7 104 53.8
GSVIVG01017603001 Vitis vinifera HOM05D005582 ORTHO05D007028 7.2e-23 111.7 104 53.8
GSVIVG01017662001 Vitis vinifera HOM05D005582 ORTHO05D007028 7.2e-23 111.7 104 53.8
CSS0025323 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 9.4e-23 111.3 104 51.0
FvH4_4g21250 Fragaria vesca HOM05D005582 ORTHO05D007028 9.4e-23 111.3 104 51.9
TWI53G0357 Tripterygium wilfordii HOM05D005582 ORTHO05D007028 1.2e-22 110.9 104 52.9
ATR0796G139 Amborella trichopoda HOM05D005582 ORTHO05D007028 2.1e-22 110.2 106 53.8
Cfa015717 Carpinus fangiana HOM05D005582 ORTHO05D007028 2.1e-22 110.2 104 52.9
Lj5g0009067 Lotus japonicus HOM05D005582 ORTHO05D007028 2.1e-22 110.2 104 52.9
Medtr1g102710 Medicago truncatula HOM05D005582 ORTHO05D007028 2.1e-22 110.2 104 52.9
Nn4g25411 Nelumbo nucifera HOM05D005582 ORTHO05D007028 2.1e-22 110.2 136 47.1
Psat6g203520 Pisum sativum HOM05D005582 ORTHO05D007028 2.1e-22 110.2 104 52.9
RcHm_v2.0_Chr4g0426871 Rosa chinensis HOM05D005582 ORTHO05D007028 2.7e-22 109.8 104 51.9
Aqoxy5G02775 Aquilegia oxysepala HOM05D005582 ORTHO05D007028 3.6e-22 109.4 104 53.8
FAN07G0038 Fragaria x ananassa HOM05D005582 ORTHO05D007028 3.6e-22 109.4 104 51.9
MELO3C021237.2 Cucumis melo HOM05D005582 ORTHO05D007028 4.7e-22 109.0 104 51.0
MD13G1143700 Malus domestica HOM05D005582 ORTHO05D007028 4.7e-22 109.0 128 46.9
Lj3C839G18 Lonicera japonica HOM05D005582 ORTHO05D007028 6.1e-22 108.6 104 51.0
PSO170G3214 Papaver somniferum HOM05D005582 ORTHO05D007028 6.1e-22 108.6 104 51.9
QL06p013845 Quercus lobata HOM05D005582 ORTHO05D007028 6.1e-22 108.6 104 50.0
QL93p1872_0012 Quercus lobata HOM05D005582 ORTHO05D007028 6.1e-22 108.6 104 50.0
TAR362G0979 Trochodendron aralioides HOM05D005582 ORTHO05D007028 6.1e-22 108.6 128 46.9
arahy.Tifrunner.gnm1.ann1.ZZ97E1 Arachis hypogaea HOM05D005582 ORTHO05D007028 8.0e-22 108.2 104 51.0
Lalb_Chr06g0160761 Lupinus albus HOM05D005582 ORTHO05D007028 8.0e-22 108.2 104 52.9
Sed0007110 Sechium edule HOM05D005582 ORTHO05D007028 8.0e-22 108.2 118 44.1
Ca_10846_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 1.0e-21 107.8 104 51.9
arahy.Tifrunner.gnm1.ann1.6ZCT8S Arachis hypogaea HOM05D005582 ORTHO05D007028 1.4e-21 107.5 104 51.0
ClCG06G004260 Citrullus lanatus HOM05D005582 ORTHO05D007028 1.4e-21 107.5 104 50.0
Actinidia01057 Actinidia chinensis HOM05D005582 ORTHO05D007028 1.8e-21 107.1 104 51.9
FAN12G2136 Fragaria x ananassa HOM05D005582 ORTHO05D007028 1.8e-21 107.1 104 51.0
Rhsim04G0247200 Rhododendron simsii HOM05D005582 ORTHO05D007028 1.8e-21 107.1 118 47.5
CiPaw.02G071000 Carya illinoinensis HOM05D005582 ORTHO05D007028 2.3e-21 106.7 135 45.2
CsaV3_6G000150 Cucumis sativus L. HOM05D005582 ORTHO05D007028 2.3e-21 106.7 104 50.0
CANSAT01G1159 Cannabis sativa HOM05D005582 ORTHO05D007028 3.0e-21 106.3 104 50.0
PGR031G2985 Punica granatum HOM05D005582 ORTHO05D007028 3.0e-21 106.3 102 48.0
Hund12246 Selenicereus undatus HOM05D005582 ORTHO05D007028 3.0e-21 106.3 106 54.7
Thecc.04G310500 Theobroma cacao HOM05D005582 ORTHO05D007028 3.0e-21 106.3 104 51.9
vmacro08001 Vaccinium macrocarpon HOM05D005582 ORTHO05D007028 3.0e-21 106.3 118 45.8
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 5.2e-21 105.5 104 51.9
ECA246G0223 Erigeron canadensis HOM05D005582 ORTHO05D007028 6.8e-21 105.1 110 50.0
Nitab4.5_0004665g0020 Nicotiana tabacum HOM05D005582 ORTHO05D007028 6.8e-21 105.1 135 42.2
Ciclev10004134m.g Citrus clementina HOM05D005582 ORTHO05D007028 8.8e-21 104.8 104 50.0
Potri.010G153300 Populus trichocarpa HOM05D005582 ORTHO05D007028 8.8e-21 104.8 137 44.5
Atru.chr11.54 Acer truncatum HOM05D005582 ORTHO05D007028 1.2e-20 104.4 135 42.2
Peaxi162Scf01194g00137 Petunia axillaris HOM05D005582 ORTHO05D007028 2.6e-20 103.2 112 50.0
Glyma.10G243400 Glycine max HOM05D005582 ORTHO05D007028 4.4e-20 102.4 104 51.0
Gohir.D09G066800 Gossypium hirsutum HOM05D005582 ORTHO05D007028 5.7e-20 102.1 104 52.9
Gorai.006G081300 Gossypium raimondii HOM05D005582 ORTHO05D007028 5.7e-20 102.1 104 52.9
Oeu022697.1 Olea europaea HOM05D005582 ORTHO05D007028 5.7e-20 102.1 104 50.0
Cpa.g.sc146.39 Carica papaya HOM05D005582 ORTHO05D007028 7.5e-20 101.7 136 44.9
Gohir.A09G067200 Gossypium hirsutum HOM05D005582 ORTHO05D007028 7.5e-20 101.7 104 51.9
Nitab4.5_0000895g0160 Nicotiana tabacum HOM05D005582 ORTHO05D007028 9.8e-20 101.3 135 42.2
HanXRQChr05g0148391 Helianthus annuus HOM05D005582 ORTHO05D007028 2.2e-19 100.1 104 46.2
Phvul.007G062300 Phaseolus vulgaris HOM05D005582 ORTHO05D007028 2.8e-19 99.8 104 50.0
MSTRG.19398 Avicennia marina HOM05D005582 ORTHO05D007028 3.7e-19 99.4 135 43.0
Eucgr.B02209 Eucalyptus grandis HOM05D005582 ORTHO05D007028 4.8e-19 99.0 104 51.0
AUR62029987 Chenopodium quinoa HOM05D005582 ORTHO05D007028 6.3e-19 98.6 104 48.1
Glyma.20G150800 Glycine max HOM05D005582 ORTHO05D007028 8.3e-19 98.2 104 50.0
Zm00001eb131030 Zea mays HOM05D005582 ORTHO05D007028 8.3e-19 98.2 102 52.9
AUR62002565 Chenopodium quinoa HOM05D005582 ORTHO05D007028 1.4e-18 97.4 104 47.1
DCAR_023392 Daucus carota HOM05D005582 ORTHO05D007028 1.8e-18 97.1 104 48.1
DCAR_023431 Daucus carota HOM05D005582 ORTHO05D007028 1.8e-18 97.1 104 48.1
Ah.07g203770 Amaranthus hybridus HOM05D005582 ORTHO05D007028 2.4e-18 96.7 104 48.1
Lsat_1_v5_gn_6_117861 Lactuca sativa HOM05D001037 ORTHO05D007028 2.4e-18 96.7 104 48.1
VMungo0720G3059 Vigna mungo HOM05D005582 ORTHO05D007028 2.4e-18 96.7 104 51.0
EL10Ac3g06266 Beta vulgaris HOM05D005582 ORTHO05D007028 3.1e-18 96.3 135 44.4
Sabra10G0117900 Salix brachista HOM05D005582 ORTHO05D007028 4.1e-18 95.9 137 42.3
THA.LOC104818852 Tarenaya hassleriana HOM05D005582 ORTHO05D007028 2.0e-17 93.6 132 43.2
HPP92_010030 Vanilla planifolia HOM05D005582 ORTHO05D007028 2.0e-17 93.6 133 42.9
Solyc12g099010.3 Solanum lycopersicum HOM05D005582 ORTHO05D007028 2.7e-17 93.2 104 48.1
Sopen12g033750 Solanum pennellii HOM05D005582 ORTHO05D007028 2.7e-17 93.2 104 48.1
CSS0001073 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 3.5e-17 92.8 110 46.4
Migut.N00012 Erythranthe guttata HOM05D005582 ORTHO05D007028 5.9e-17 92.0 104 45.2
Cc03_g00260 Coffea canephora HOM05D005582 ORTHO05D007028 1.3e-16 90.9 135 38.5
Aa31LG11G11190 Aethionema arabicum HOM05D005582 ORTHO05D007028 5.0e-16 89.0 124 43.5
Migut.K01509 Erythranthe guttata HOM05D005582 ORTHO05D007028 5.0e-16 89.0 104 46.2
SGA_v2.0_scaffold227G43203 Striga asiatica HOM05D005582 ORTHO05D007028 1.1e-15 87.8 104 43.3
Manes.15G004000 Manihot esculenta HOM05D005582 ORTHO05D007028 4.2e-15 85.9 102 43.1
unitig_26.g10616 Utricularia gibba HOM05D005582 ORTHO05D007028 4.2e-15 85.9 104 45.2
BcaC04g18671 Brassica carinata HOM05D005582 ORTHO05D007028 1.6e-14 84.0 104 42.3
C09p57960 Brassica napus HOM05D005582 ORTHO05D007028 1.6e-14 84.0 104 42.3
BolC9t58663H Brassica oleracea HOM05D005582 ORTHO05D007028 1.6e-14 84.0 104 42.3
Thhalv10012423m.g Eutrema salsugineum HOM05D005582 ORTHO05D007028 1.6e-14 84.0 104 46.2
BcaB08g36665 Brassica carinata HOM05D005582 ORTHO05D007028 2.8e-14 83.2 104 42.3
BcaB08g36669 Brassica carinata HOM05D005582 ORTHO05D007028 2.8e-14 83.2 104 42.3
Mapoly0075s0059 Marchantia polymorpha HOM05D005582 ORTHO05D007028 3.6e-14 82.8 130 38.5
Sp6g25800 Schrenkiella parvula HOM05D005582 ORTHO05D007028 4.7e-14 82.4 104 43.3
A10p21030 Brassica napus HOM05D005582 ORTHO05D007028 2.3e-13 80.1 106 41.5
BraA10t44167Z Brassica rapa HOM05D005582 ORTHO05D007028 2.3e-13 80.1 106 41.5
Carub.0006s1680 Capsella rubella HOM05D005582 ORTHO05D007028 5.2e-13 79.0 104 43.3
AT5G18525 Arabidopsis thaliana HOM05D005582 ORTHO05D007028 1.2e-12 77.8 104 41.3
SMO203G0276 Selaginella moellendorffii HOM05D005582 ORTHO05D007028 3.4e-12 76.3 104 42.3
Nitab4.5_0006377g0020 Nicotiana tabacum HOM05D002159 ORTHO05D005625 1.7e-11 73.9 81 45.7
SEGI_37027 Sequoiadendron giganteum HOM05D000181 ORTHO05D014369 1.0e-08 64.7 58 58.6
AagrBONN_evm.TU.Sc2ySwM_344.3353 Anthoceros agrestis HOM05D005582 ORTHO05D007028 2.3e-08 63.5 107 34.6
SEGI_29964 Sequoiadendron giganteum HOM05D000557 ORTHO05D007028 2.5e-07 60.1 34 79.4


User provided reference genes

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