Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30577 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.4e-89 332.8 159 100.0
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 6.8e-55 217.6 105 98.1
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 4.9e-13 78.6 105 37.1
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 2.7e-11 72.8 112 38.4
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 3.5e-11 72.4 117 36.8
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 7.9e-11 71.2 113 35.4
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 7.9e-11 71.2 98 39.8
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 1.0e-10 70.9 98 38.8
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 1.7e-10 70.1 130 32.3
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 1.7e-10 70.1 130 32.3
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.7e-10 70.1 105 39.0
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 2.3e-10 69.7 104 39.4
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 3.0e-10 69.3 104 39.4
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 3.0e-10 69.3 137 32.8
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 3.9e-10 68.9 111 34.2
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 5.1e-10 68.6 112 34.8
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 5.1e-10 68.6 105 38.1
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 5.1e-10 68.6 104 37.5
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 5.1e-10 68.6 100 38.0
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 6.6e-10 68.2 122 33.6
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 8.7e-10 67.8 122 32.0
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 1.1e-09 67.4 113 33.6
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 1.1e-09 67.4 112 33.0
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 1.5e-09 67.0 113 34.5
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 2.5e-09 66.2 104 38.5
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 2.5e-09 66.2 140 32.1
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 3.3e-09 65.9 104 36.5
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 3.3e-09 65.9 99 36.4
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 3.3e-09 65.9 98 37.8
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 4.3e-09 65.5 98 37.8
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 5.6e-09 65.1 103 35.0
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 5.6e-09 65.1 104 35.6
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 5.6e-09 65.1 104 35.6
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 5.6e-09 65.1 98 37.8
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 5.6e-09 65.1 99 35.4
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 5.6e-09 65.1 104 35.6
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 7.3e-09 64.7 112 31.2
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 7.3e-09 64.7 98 37.8
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 9.6e-09 64.3 99 35.4
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 9.6e-09 64.3 104 35.6
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 1.3e-08 63.9 112 33.0
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 1.6e-08 63.5 101 35.6
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.6e-08 63.5 99 34.3
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 4.8e-08 62.0 98 33.7
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 4.8e-08 62.0 107 35.5
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 4.8e-08 62.0 104 35.6
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 8.1e-08 61.2 98 34.7
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 8.1e-08 61.2 98 36.7
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 8.1e-08 61.2 98 37.8
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 1.1e-07 60.8 98 35.7
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 1.1e-07 60.8 98 34.7
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 1.1e-07 60.8 103 29.1
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 1.1e-07 60.8 107 32.7
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 1.4e-07 60.5 117 34.2
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 1.8e-07 60.1 143 32.2
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 2.4e-07 59.7 105 29.5
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 3.1e-07 59.3 98 33.7
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 3.1e-07 59.3 121 28.1
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 3.1e-07 59.3 100 32.0
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 4.0e-07 58.9 104 29.8
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 5.3e-07 58.5 110 30.9
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 5.3e-07 58.5 101 33.7
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 9.0e-07 57.8 104 32.7
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 9.0e-07 57.8 98 31.6
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 9.0e-07 57.8 104 30.8
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 1.2e-06 57.4 105 31.4
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 2.0e-06 56.6 104 31.7
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 2.0e-06 56.6 104 31.7
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 2.6e-06 56.2 104 32.7
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 2.6e-06 56.2 105 31.4
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 2.6e-06 56.2 100 31.0
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 4.5e-06 55.5 104 33.7
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 5.8e-06 55.1 93 32.3
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 7.6e-06 54.7 104 29.8


User provided reference genes

Program Settings