Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30520 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 1.3e-69 266.2 124 100.0
SEGI_27865 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 1.1e-52 209.9 97 100.0
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 1.8e-39 166.0 97 77.3
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 1.8e-39 166.0 97 79.4
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 5.3e-39 164.5 95 78.9
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 6.9e-39 164.1 93 79.6
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 6.9e-39 164.1 93 79.6
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 3.4e-38 161.8 97 77.3
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 4.5e-38 161.4 95 77.9
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 4.5e-38 161.4 96 76.0
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 1.0e-37 160.2 96 75.0
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 1.3e-37 159.8 96 75.0
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 1.3e-37 159.8 97 74.2
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 1.7e-37 159.5 96 69.8
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 1.7e-37 159.5 93 75.3
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 2.2e-37 159.1 96 74.0
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 2.9e-37 158.7 96 74.0
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 2.9e-37 158.7 94 74.5
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 8.5e-37 157.1 93 76.3
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 1.1e-36 156.8 95 73.7
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 1.1e-36 156.8 95 75.8
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 1.4e-36 156.4 94 76.6
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 1.4e-36 156.4 95 74.7
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 5.5e-36 154.5 94 72.3
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 5.5e-36 154.5 96 71.9
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 7.2e-36 154.1 94 73.4
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 9.4e-36 153.7 95 74.7
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 9.4e-36 153.7 95 72.6
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 9.4e-36 153.7 95 73.7
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 1.2e-35 153.3 96 70.8
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 1.2e-35 153.3 96 70.8
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 2.1e-35 152.5 94 72.3
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 2.1e-35 152.5 94 71.3
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 2.1e-35 152.5 93 74.2
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 2.1e-35 152.5 97 71.1
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 2.7e-35 152.1 95 71.6
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 2.7e-35 152.1 95 72.6
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 2.7e-35 152.1 93 73.1
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 3.6e-35 151.8 95 72.6
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 3.6e-35 151.8 93 71.0
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 4.7e-35 151.4 96 70.8
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 4.7e-35 151.4 93 72.0
Sp1g16080 Schrenkiella parvula HOM05D006376 ORTHO05D008046 4.7e-35 151.4 93 72.0
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 6.1e-35 151.0 93 69.9
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 6.1e-35 151.0 93 71.0
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 6.1e-35 151.0 93 71.0
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 6.1e-35 151.0 93 69.9
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 6.1e-35 151.0 94 70.2
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 6.1e-35 151.0 95 72.6
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 6.1e-35 151.0 95 70.5
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 7.9e-35 150.6 96 69.8
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 7.9e-35 150.6 93 73.1
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 7.9e-35 150.6 95 73.7
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 1.4e-34 149.8 93 71.0
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 1.4e-34 149.8 93 71.0
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 1.4e-34 149.8 93 71.0
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 1.4e-34 149.8 94 70.2
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 1.4e-34 149.8 95 69.5
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 1.8e-34 149.4 94 72.3
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 1.8e-34 149.4 94 72.3
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 1.8e-34 149.4 96 67.7
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 2.3e-34 149.1 94 71.3
MD06G1223100 Malus domestica HOM05D006376 ORTHO05D008046 2.3e-34 149.1 93 68.8
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 3.0e-34 148.7 95 70.5
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 3.0e-34 148.7 93 69.9
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 3.0e-34 148.7 96 67.7
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 3.9e-34 148.3 95 70.5
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 6.7e-34 147.5 93 68.8
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 6.7e-34 147.5 95 69.5
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 6.7e-34 147.5 93 72.0
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 8.8e-34 147.1 94 70.2
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 8.8e-34 147.1 93 68.8
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 8.8e-34 147.1 93 68.8
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 8.8e-34 147.1 96 65.6
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 1.5e-33 146.4 93 71.0
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.5e-33 146.4 93 68.8
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 1.5e-33 146.4 94 69.1
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 2.0e-33 146.0 93 68.8
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 2.0e-33 146.0 94 68.1
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 2.0e-33 146.0 95 66.3
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 3.3e-33 145.2 92 69.6
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 3.3e-33 145.2 97 70.1
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 4.4e-33 144.8 95 71.6
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 5.7e-33 144.4 96 63.5
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.3e-32 143.3 93 66.7
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 1.3e-32 143.3 93 68.8
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 1.3e-32 143.3 95 64.2
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 2.2e-32 142.5 93 66.7
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 2.2e-32 142.5 96 63.5
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 2.2e-32 142.5 93 65.6
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 4.8e-32 141.4 94 66.0
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 6.3e-32 141.0 95 63.2
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 6.3e-32 141.0 95 64.2
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 6.3e-32 141.0 95 64.2
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 8.2e-32 140.6 96 63.5
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 8.2e-32 140.6 95 64.2
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 1.8e-31 139.4 94 64.9
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 3.1e-31 138.7 95 63.2
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 3.1e-31 138.7 93 63.4
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 5.3e-31 137.9 94 59.6
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 2.6e-30 135.6 90 67.8
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.9e-28 129.4 91 61.5
SEGI_17791 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 1.9e-28 129.4 60 100.0
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 2.7e-27 125.6 94 62.8
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 4.7e-27 124.8 82 67.1
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 5.2e-26 121.3 91 59.3
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 4.8e-24 114.8 75 69.3
Mapoly0001s0324 Marchantia polymorpha HOM05D006376 ORTHO05D008046 1.1e-23 113.6 93 55.9
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 1.2e-22 110.2 93 51.6
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 1.6e-11 73.2 91 40.7
Cre09.g401350 Chlamydomonas reinhardtii HOM05D006376 ORTHO05D008046 4.0e-10 68.6 92 38.0


User provided reference genes

Program Settings