Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 7.6e-169 597.0 292 100.0
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 1.8e-93 346.7 262 61.8
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 7.5e-92 341.3 273 59.7
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 2.8e-91 339.3 268 60.4
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.8e-91 338.6 268 60.4
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 8.3e-91 337.8 268 60.1
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 1.8e-90 336.7 269 59.5
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 4.1e-90 335.5 268 59.7
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 5.4e-90 335.1 263 61.2
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 7.0e-90 334.7 263 59.3
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 7.0e-90 334.7 265 60.4
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 7.0e-90 334.7 263 59.7
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 9.1e-90 334.3 263 59.7
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.6e-89 333.6 263 57.8
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 2.7e-89 332.8 263 60.5
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 2.7e-89 332.8 261 59.8
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 4.5e-89 332.0 275 57.8
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.0e-88 330.9 257 59.9
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.0e-88 330.9 263 58.9
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 1.0e-88 330.9 263 58.9
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 1.7e-88 330.1 262 59.5
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 1.7e-88 330.1 261 59.0
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 2.2e-88 329.7 262 57.3
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 2.9e-88 329.3 263 57.8
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 3.8e-88 328.9 262 58.0
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 3.8e-88 328.9 263 58.9
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 5.0e-88 328.6 261 58.6
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 5.0e-88 328.6 261 58.6
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 8.5e-88 327.8 263 57.8
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 8.5e-88 327.8 263 58.2
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.1e-87 327.4 262 60.7
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 1.5e-87 327.0 263 58.6
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 1.5e-87 327.0 262 57.6
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.5e-87 326.2 267 59.9
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 2.5e-87 326.2 265 57.7
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 2.5e-87 326.2 262 57.3
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 3.2e-87 325.9 261 57.9
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 4.2e-87 325.5 263 57.4
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 5.5e-87 325.1 260 58.5
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 7.2e-87 324.7 262 57.3
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 7.2e-87 324.7 262 58.0
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 7.2e-87 324.7 262 58.0
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 9.5e-87 324.3 262 56.9
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 1.2e-86 323.9 262 57.3
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 1.2e-86 323.9 260 57.7
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 2.1e-86 323.2 265 57.4
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 2.1e-86 323.2 272 56.2
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 3.6e-86 322.4 260 58.1
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 4.7e-86 322.0 263 57.4
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 4.7e-86 322.0 269 57.2
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 6.1e-86 321.6 273 57.1
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 6.1e-86 321.6 263 57.0
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 6.1e-86 321.6 265 56.2
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 6.1e-86 321.6 263 57.8
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 8.0e-86 321.2 258 58.1
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 1.4e-85 320.5 263 57.4
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 1.8e-85 320.1 305 52.5
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 3.0e-85 319.3 277 54.5
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 8.8e-85 317.8 259 56.8
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.5e-84 317.0 272 55.1
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 1.5e-84 317.0 275 56.0
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.5e-84 317.0 263 55.5
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 1.5e-84 317.0 258 57.8
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 2.0e-84 316.6 273 55.3
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 3.4e-84 315.8 263 55.5
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 3.4e-84 315.8 263 55.1
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 4.4e-84 315.5 262 57.3
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 5.7e-84 315.1 275 55.6
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 5.7e-84 315.1 275 54.2
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 5.7e-84 315.1 263 54.4
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 7.5e-84 314.7 273 54.6
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 9.8e-84 314.3 259 57.5
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 9.8e-84 314.3 272 55.5
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 1.7e-83 313.5 259 56.4
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 2.2e-83 313.2 261 58.6
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 2.8e-83 312.8 275 55.6
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 4.9e-83 312.0 259 56.4
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 4.9e-83 312.0 259 56.4
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 8.3e-83 311.2 263 54.8
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 1.8e-82 310.1 271 55.7
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 2.4e-82 309.7 264 54.5
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 2.4e-82 309.7 264 54.5
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 4.1e-82 308.9 275 53.5
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 7.0e-82 308.1 262 57.6
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 9.2e-82 307.8 255 56.5
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 9.2e-82 307.8 259 56.0
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 1.6e-81 307.0 263 52.9
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 4.5e-81 305.4 260 54.2
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 7.7e-81 304.7 286 51.7
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 1.3e-80 303.9 259 55.6
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 5.6e-79 298.5 233 62.7
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.6e-78 297.0 275 52.7
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.6e-78 297.0 239 57.7
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 3.6e-78 295.8 249 56.2
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 3.6e-78 295.8 261 53.6
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 6.8e-77 291.6 255 54.1
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.2e-73 280.8 234 57.3
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 2.0e-73 280.0 265 51.7
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 4.0e-69 265.8 263 49.0
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 7.5e-68 261.5 257 48.2
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 3.0e-64 249.6 198 59.6
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.6e-62 243.8 256 44.1
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 2.8e-62 243.0 259 45.2
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 7.6e-52 208.4 160 60.6
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 5.8e-44 182.2 253 38.3
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.3e-32 144.4 149 48.3
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.8e-30 136.7 97 64.9
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 4.9e-27 125.9 227 36.1
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.2e-25 121.3 186 36.6
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 1.6e-25 120.9 95 55.8
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 1.6e-25 120.9 141 46.1
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 4.3e-23 112.8 93 53.8
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 3.7e-22 109.8 84 61.9
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.9e-19 100.1 95 49.5
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 5.1e-16 89.4 71 57.7
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 1.5e-15 87.8 78 52.6
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 4.3e-15 86.3 63 61.9


User provided reference genes

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