Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30482 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 1.4e-79 300.1 220 100.0
SEGI_31512 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 3.0e-45 186.0 97 100.0
SEGI_17562 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 2.0e-41 173.3 102 90.2
Aa31sc79G60 Aethionema arabicum HOM05D004794 ORTHO05D005875 1.6e-38 163.7 102 83.3
Lj5g0022431 Lotus japonicus HOM05D004794 ORTHO05D005875 2.1e-38 163.3 102 82.4
TWI79G0577 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 2.7e-38 162.9 102 82.4
TWI75G0950 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 3.6e-38 162.5 102 81.4
Ciclev10015744m.g Citrus clementina HOM05D004794 ORTHO05D005875 4.7e-38 162.2 102 82.4
Gohir.A12G142300 Gossypium hirsutum HOM05D004794 ORTHO05D005875 4.7e-38 162.2 102 82.4
PGR102G0643 Punica granatum HOM05D004794 ORTHO05D005875 6.1e-38 161.8 102 82.4
Gohir.D12G147200 Gossypium hirsutum HOM05D004794 ORTHO05D005875 8.0e-38 161.4 102 82.4
Gorai.008G158400 Gossypium raimondii HOM05D004794 ORTHO05D005875 8.0e-38 161.4 102 82.4
Mapoly0010s0061 Marchantia polymorpha HOM05D004794 ORTHO05D005875 8.0e-38 161.4 102 81.4
Aqoxy5G03876 Aquilegia oxysepala HOM05D004794 ORTHO05D005875 1.0e-37 161.0 104 80.8
COL.COLO4_20120 Corchorus olitorius HOM05D004794 ORTHO05D005875 1.0e-37 161.0 102 79.4
Potri.010G117200 Populus trichocarpa HOM05D004794 ORTHO05D005875 1.0e-37 161.0 102 80.4
EL10Ac6g14275 Beta vulgaris HOM05D004794 ORTHO05D005875 1.4e-37 160.6 102 81.4
Dinv16165 Davidia involucrata HOM05D004794 ORTHO05D005875 1.4e-37 160.6 102 81.4
Sed0004857 Sechium edule HOM05D004794 ORTHO05D005875 1.4e-37 160.6 102 79.4
vmacro01423 Vaccinium macrocarpon HOM05D004794 ORTHO05D005875 1.4e-37 160.6 102 82.4
AL5G10060 Arabidopsis lyrata HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
AT2G01110 Arabidopsis thaliana HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
BcaB07g30424 Brassica carinata HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
BcaC03g16998 Brassica carinata HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
BcaC06g31333 Brassica carinata HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
BcaC06g34216 Brassica carinata HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
A02p31690 Brassica napus HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
A06p44670 Brassica napus HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
C02p49070 Brassica napus HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
C07p31580 Brassica napus HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
BolC2t10997H Brassica oleracea HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
BolC7t43697H Brassica oleracea HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
BraA02t08175Z Brassica rapa HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
BraA06t27340Z Brassica rapa HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
Carub.0005s0009 Capsella rubella HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
Eucgr.B02866 Eucalyptus grandis HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
Glyma.10G268000 Glycine max HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
Manes.14G109500 Manihot esculenta HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
Sp2g12580 Schrenkiella parvula HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 81.4
SMO119G0095 Selaginella moellendorffii HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 80.4
Thecc.02G215600 Theobroma cacao HOM05D004794 ORTHO05D005875 1.8e-37 160.2 102 80.4
CSS0006530 Camellia sinensis var. sinensis HOM05D004794 ORTHO05D005875 2.3e-37 159.8 102 80.4
Duzib268G0539 Durio zibethinus HOM05D004794 ORTHO05D005875 2.3e-37 159.8 102 80.4
Lj3A877T98 Lonicera japonica HOM05D004794 ORTHO05D005875 2.3e-37 159.8 102 81.4
PSO170G3473 Papaver somniferum HOM05D004794 ORTHO05D005875 2.3e-37 159.8 102 79.4
PSO445G0020 Papaver somniferum HOM05D004794 ORTHO05D005875 2.3e-37 159.8 102 79.4
Pp3c8_3800 Physcomitrium patens HOM05D004794 ORTHO05D005875 2.3e-37 159.8 102 80.4
TAR622G1294 Trochodendron aralioides HOM05D004794 ORTHO05D005875 2.3e-37 159.8 102 80.4
CARHR143660 Cardamine hirsuta HOM05D004794 ORTHO05D005875 3.0e-37 159.5 102 80.4
CBR_g19219 Chara braunii HOM05D004794 ORTHO05D005875 3.0e-37 159.5 102 79.4
DCAR_030186 Daucus carota HOM05D004794 ORTHO05D005875 3.0e-37 159.5 102 80.4
Lalb_Chr02g0145631 Lupinus albus HOM05D004794 ORTHO05D005875 3.0e-37 159.5 102 79.4
Manes.06G063100 Manihot esculenta HOM05D004794 ORTHO05D005875 3.0e-37 159.5 102 78.4
Nn4g24023 Nelumbo nucifera HOM05D004794 ORTHO05D005875 3.0e-37 159.5 102 80.4
TAR374G0638 Trochodendron aralioides HOM05D004794 ORTHO05D005875 3.0e-37 159.5 102 80.4
Actinidia31991 Actinidia chinensis HOM05D004794 ORTHO05D005875 4.0e-37 159.1 102 79.4
arahy.Tifrunner.gnm1.ann1.B80FEM Arachis hypogaea HOM05D004794 ORTHO05D005875 4.0e-37 159.1 102 80.4
Cfa015814 Carpinus fangiana HOM05D004794 ORTHO05D005875 4.0e-37 159.1 102 78.4
DCAR_007276 Daucus carota HOM05D004794 ORTHO05D005875 4.0e-37 159.1 102 79.4
Lj6A750T92 Lonicera japonica HOM05D004794 ORTHO05D005875 4.0e-37 159.1 102 80.4
SGA_v2.0_scaffold376G50295 Striga asiatica HOM05D004794 ORTHO05D005875 4.0e-37 159.1 102 79.4
Atru.chr11.334 Acer truncatum HOM05D004794 ORTHO05D005875 5.2e-37 158.7 102 79.4
Atru.chr11.341 Acer truncatum HOM05D004794 ORTHO05D005875 5.2e-37 158.7 102 79.4
AUR62002773 Chenopodium quinoa HOM05D004794 ORTHO05D005875 5.2e-37 158.7 102 79.4
Phvul.007G034300 Phaseolus vulgaris HOM05D004794 ORTHO05D005875 5.2e-37 158.7 102 78.4
Sabra10G0086800 Salix brachista HOM05D004794 ORTHO05D005875 5.2e-37 158.7 102 79.4
Sabra10G0088400 Salix brachista HOM05D004794 ORTHO05D005875 5.2e-37 158.7 102 79.4
THA.LOC104805049 Tarenaya hassleriana HOM05D004794 ORTHO05D005875 5.2e-37 158.7 102 80.4
HanXRQChr15g0477711 Helianthus annuus HOM05D004794 ORTHO05D005875 6.8e-37 158.3 104 77.9
Ah.03g138420 Amaranthus hybridus HOM05D004794 ORTHO05D005875 8.8e-37 157.9 102 79.4
Medtr1g109080 Medicago truncatula HOM05D004794 ORTHO05D005875 8.8e-37 157.9 99 80.8
Pp3c3_36440 Physcomitrium patens HOM05D004794 ORTHO05D005875 8.8e-37 157.9 99 81.8
Sc04g0005890 Simmondsia chinensis HOM05D004794 ORTHO05D005875 8.8e-37 157.9 102 79.4
TPR.G4856 Trifolium pratense HOM05D004794 ORTHO05D005875 8.8e-37 157.9 99 80.8
HPP92_020138 Vanilla planifolia HOM05D004794 ORTHO05D005875 8.8e-37 157.9 102 78.4
CDE07G0253 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 1.2e-36 157.5 102 77.5
Prupe.1G320000 Prunus persica HOM05D004794 ORTHO05D005875 1.2e-36 157.5 102 78.4
HPP92_027135 Vanilla planifolia HOM05D004794 ORTHO05D005875 1.2e-36 157.5 102 79.4
Ca_23704_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 1.5e-36 157.1 102 78.4
Ca_30211_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 1.5e-36 157.1 102 78.4
Migut.E00392 Erythranthe guttata HOM05D004794 ORTHO05D005875 1.5e-36 157.1 102 78.4
Glyma.20G123100 Glycine max HOM05D004794 ORTHO05D005875 1.5e-36 157.1 102 80.4
HanXRQChr01g0013251 Helianthus annuus HOM05D004794 ORTHO05D005875 1.5e-36 157.1 104 76.9
MD13G1032500 Malus domestica HOM05D004794 ORTHO05D005875 1.5e-36 157.1 104 76.9
CiPaw.05G245300 Carya illinoinensis HOM05D004794 ORTHO05D005875 2.0e-36 156.8 102 78.4
Haze_00684 Corylus avellana HOM05D004794 ORTHO05D005875 2.0e-36 156.8 103 76.7
CsaV3_5G034760 Cucumis sativus L. HOM05D004794 ORTHO05D005875 2.0e-36 156.8 102 78.4
ECA246G3704 Erigeron canadensis HOM05D004794 ORTHO05D005875 2.0e-36 156.8 104 76.9
MBI16_g29821_MAGBIO Magnolia biondii HOM05D004794 ORTHO05D005875 2.0e-36 156.8 102 79.4
MD16G1034600 Malus domestica HOM05D004794 ORTHO05D005875 2.0e-36 156.8 102 77.5
Oeu048392.1 Olea europaea HOM05D004794 ORTHO05D005875 2.0e-36 156.8 102 80.4
QL01p003046 Quercus lobata HOM05D004794 ORTHO05D005875 2.0e-36 156.8 102 79.4
EL10Ac4g08742 Beta vulgaris HOM05D004794 ORTHO05D005875 2.6e-36 156.4 102 78.4
AUR62037257 Chenopodium quinoa HOM05D004794 ORTHO05D005875 2.6e-36 156.4 102 79.4
ClCG05G022340 Citrullus lanatus HOM05D004794 ORTHO05D005875 2.6e-36 156.4 102 78.4
MELO3C012288.2 Cucumis melo HOM05D004794 ORTHO05D005875 2.6e-36 156.4 102 78.4
Psat6g222720 Pisum sativum HOM05D004794 ORTHO05D005875 2.6e-36 156.4 99 79.8
SalBow8G5373 Salvia bowleyana HOM05D004794 ORTHO05D005875 2.6e-36 156.4 102 76.5
Hund25018 Selenicereus undatus HOM05D004794 ORTHO05D005875 2.6e-36 156.4 102 78.4
GSVIVG01011805001 Vitis vinifera HOM05D004794 ORTHO05D005875 2.6e-36 156.4 102 77.5
MSTRG.13564 Avicennia marina HOM05D004794 ORTHO05D005875 3.4e-36 156.0 102 78.4
CANSAT01G0565 Cannabis sativa HOM05D004794 ORTHO05D005875 3.4e-36 156.0 102 77.5
Lalb_Chr06g0165741 Lupinus albus HOM05D004794 ORTHO05D005875 3.4e-36 156.0 102 78.4
Oeu022847.1 Olea europaea HOM05D004794 ORTHO05D005875 3.4e-36 156.0 97 83.5
arahy.Tifrunner.gnm1.ann1.9SFQ4R Arachis hypogaea HOM05D004794 ORTHO05D005875 4.4e-36 155.6 102 78.4
FvH4_4g26390 Fragaria vesca HOM05D004794 ORTHO05D005875 4.4e-36 155.6 102 78.4
FAN07G1519 Fragaria x ananassa HOM05D004794 ORTHO05D005875 4.4e-36 155.6 102 78.4
FAN12G0017 Fragaria x ananassa HOM05D004794 ORTHO05D005875 4.4e-36 155.6 102 78.4
FAN12G0914 Fragaria x ananassa HOM05D004794 ORTHO05D005875 4.4e-36 155.6 102 78.4
FAN17G0450 Fragaria x ananassa HOM05D004794 ORTHO05D005875 4.4e-36 155.6 102 78.4
FAN22G0499 Fragaria x ananassa HOM05D004794 ORTHO05D005875 4.4e-36 155.6 102 78.4
Lsat_1_v5_gn_3_54000 Lactuca sativa HOM05D004794 ORTHO05D005875 4.4e-36 155.6 104 76.0
RcHm_v2.0_Chr4g0434021 Rosa chinensis HOM05D004794 ORTHO05D005875 5.7e-36 155.2 102 77.5
HPP92_021566 Vanilla planifolia HOM05D004794 ORTHO05D005875 5.7e-36 155.2 102 78.4
CDE06G2233 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 7.5e-36 154.8 102 75.5
Hma1.2p1_0114F.1_g055470 Hydrangea macrophylla HOM05D004794 ORTHO05D005875 7.5e-36 154.8 102 74.5
Rhsim12G0088300 Rhododendron simsii HOM05D004794 ORTHO05D005875 9.8e-36 154.5 97 82.5
AagrBONN_evm.TU.Sc2ySwM_368.2774 Anthoceros agrestis HOM05D004794 ORTHO05D005875 1.3e-35 154.1 104 74.0
CAN.G1489.14 Capsicum annuum HOM05D004794 ORTHO05D005875 1.3e-35 154.1 102 78.4
Dinv04904 Davidia involucrata HOM05D004794 ORTHO05D005875 1.3e-35 154.1 102 75.5
Nitab4.5_0013146g0030 Nicotiana tabacum HOM05D004794 ORTHO05D005875 1.3e-35 154.1 102 78.4
Peaxi162Scf00205g01022 Petunia axillaris HOM05D004794 ORTHO05D005875 1.3e-35 154.1 102 78.4
Solyc05g008530.3 Solanum lycopersicum HOM05D004794 ORTHO05D005875 1.3e-35 154.1 102 78.4
Sopen05g004370 Solanum pennellii HOM05D004794 ORTHO05D005875 1.3e-35 154.1 102 78.4
ATR0691G049 Amborella trichopoda HOM05D004794 ORTHO05D005875 1.7e-35 153.7 102 76.5
Oeu029170.1 Olea europaea HOM05D004794 ORTHO05D005875 2.8e-35 152.9 102 77.5
Zm00001eb009240 Zea mays HOM05D004794 ORTHO05D005875 2.8e-35 152.9 102 74.5
Nitab4.5_0000350g0140 Nicotiana tabacum HOM05D004794 ORTHO05D005875 3.7e-35 152.5 102 77.5
PGSC0003DMG400030563 Solanum tuberosum HOM05D004794 ORTHO05D005875 3.7e-35 152.5 102 77.5
Migut.L01019 Erythranthe guttata HOM05D004794 ORTHO05D005875 4.8e-35 152.1 102 76.5
Os01g0501700 Oryza sativa ssp. japonica HOM05D004794 ORTHO05D005875 8.3e-35 151.4 102 75.5
SalBow8G4147 Salvia bowleyana HOM05D004794 ORTHO05D005875 1.4e-34 150.6 102 75.5
PRCOL_00000588 Prasinoderma coloniale HOM05D004794 ORTHO05D005875 1.3e-32 144.1 101 68.3
MCO02G003 Micromonas commoda HOM05D004794 ORTHO05D005875 5.0e-32 142.1 104 67.3
Cc11_g09270 Coffea canephora HOM05D004794 ORTHO05D005875 4.2e-31 139.0 102 70.6
Duzib251G0273 Durio zibethinus HOM05D004794 ORTHO05D005875 9.5e-31 137.9 102 71.6
Thhalv10000946m.g Eutrema salsugineum HOM05D004794 ORTHO05D005875 1.6e-30 137.1 91 78.0
Lsat_1_v5_gn_4_15760 Lactuca sativa HOM05D004794 ORTHO05D005875 1.4e-29 134.0 104 69.2
Cre03.g145887 Chlamydomonas reinhardtii HOM05D004794 ORTHO05D005875 8.8e-29 131.3 101 68.3
ECA234G2688 Erigeron canadensis HOM05D004794 ORTHO05D005875 1.2e-28 131.0 102 67.6
HanXRQChr17g0567091 Helianthus annuus HOM05D004794 ORTHO05D005875 5.7e-28 128.6 102 67.6
A09p23220 Brassica napus HOM05D004794 ORTHO05D005875 1.3e-19 100.9 83 69.9
BraA09t37925Z Brassica rapa HOM05D004794 ORTHO05D005875 1.3e-19 100.9 83 69.9
unitig_8.g3987 Utricularia gibba HOM05D000722 ORTHO05D000590 2.7e-17 93.2 58 79.3
Zm00001eb399680 Zea mays HOM05D004794 ORTHO05D005875 2.0e-09 67.0 102 42.2
Cpa.g.sc65.92 Carica papaya HOM05D004794 ORTHO05D005875 3.5e-09 66.2 43 79.1
BcaC03g16992 Brassica carinata HOM05D004794 ORTHO05D005875 3.9e-08 62.8 39 74.4
BolC2t10985H Brassica oleracea HOM05D004794 ORTHO05D005875 3.9e-08 62.8 39 74.4


User provided reference genes

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