Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30466 Sequoiadendron giganteum HOM05D004998 ORTHO05D006104 2.1e-80 302.4 157 100.0
Lj1A149T62 Lonicera japonica HOM05D004998 ORTHO05D006104 1.2e-16 90.5 141 41.8
GSVIVG01024930001 Vitis vinifera HOM05D004998 ORTHO05D006104 2.8e-16 89.4 140 39.3
Dinv17028 Davidia involucrata HOM05D004998 ORTHO05D006104 3.0e-15 85.9 134 41.8
Dinv42976 Davidia involucrata HOM05D004998 ORTHO05D006104 3.0e-15 85.9 134 41.8
Dinv43123 Davidia involucrata HOM05D004998 ORTHO05D006104 3.0e-15 85.9 134 41.8
MBI14_g12121_MAGBIO Magnolia biondii HOM05D004998 ORTHO05D006104 8.9e-15 84.3 141 42.6
Peaxi162Scf00122g01415 Petunia axillaris HOM05D004998 ORTHO05D006104 3.4e-14 82.4 149 39.6
Ciclev10029345m.g Citrus clementina HOM05D004998 ORTHO05D006104 4.4e-14 82.0 139 40.3
Glyma.15G036800 Glycine max HOM05D004998 ORTHO05D006104 5.7e-14 81.6 134 41.8
CDE02G2808 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 1.7e-13 80.1 150 36.7
Migut.D02075 Erythranthe guttata HOM05D004998 ORTHO05D006104 2.2e-13 79.7 138 39.1
Hma1.2p1_0615F.1_g189810 Hydrangea macrophylla HOM05D004998 ORTHO05D006104 2.8e-13 79.3 141 38.3
vmacro03047 Vaccinium macrocarpon HOM05D004998 ORTHO05D006104 2.8e-13 79.3 144 38.9
VMungo1080G1028 Vigna mungo HOM05D004998 ORTHO05D006104 3.7e-13 79.0 133 40.6
Aqoxy1G00915 Aquilegia oxysepala HOM05D004998 ORTHO05D006104 4.9e-13 78.6 145 42.1
Psat5g285160 Pisum sativum HOM05D004998 ORTHO05D006104 4.9e-13 78.6 131 38.2
Rhsim13G0078800 Rhododendron simsii HOM05D004998 ORTHO05D006104 4.9e-13 78.6 141 41.1
ATR0559G067 Amborella trichopoda HOM05D004998 ORTHO05D006104 8.3e-13 77.8 135 34.8
CSS0032367 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 1.1e-12 77.4 140 37.9
CSS0033668 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 1.4e-12 77.0 141 38.3
DCAR_005961 Daucus carota HOM05D004998 ORTHO05D006104 1.4e-12 77.0 135 41.5
Duzib150G0269 Durio zibethinus HOM05D004998 ORTHO05D006104 1.4e-12 77.0 132 39.4
PGR102G0830 Punica granatum HOM05D004998 ORTHO05D006104 1.4e-12 77.0 141 39.7
Atru.chr3.3979 Acer truncatum HOM05D004998 ORTHO05D006104 1.8e-12 76.6 132 39.4
Medtr2g097480 Medicago truncatula HOM05D004998 ORTHO05D006104 2.4e-12 76.3 138 37.0
Phvul.L006843 Phaseolus vulgaris HOM05D004998 ORTHO05D006104 4.1e-12 75.5 134 40.3
Actinidia23927 Actinidia chinensis HOM05D004998 ORTHO05D006104 5.4e-12 75.1 137 35.0
ClCG02G020020 Citrullus lanatus HOM05D004998 ORTHO05D006104 5.4e-12 75.1 135 40.7
Nn2g11147 Nelumbo nucifera HOM05D004998 ORTHO05D006104 9.2e-12 74.3 143 37.8
Actinidia34418 Actinidia chinensis HOM05D004998 ORTHO05D006104 1.2e-11 73.9 137 35.8
Lj3g0014072 Lotus japonicus HOM05D004998 ORTHO05D006104 1.2e-11 73.9 137 38.7
Thecc.09G318900 Theobroma cacao HOM05D004998 ORTHO05D006104 1.6e-11 73.6 132 40.9
PGSC0003DMG400002149 Solanum tuberosum HOM05D004998 ORTHO05D006104 2.0e-11 73.2 141 38.3
Cfa011521 Carpinus fangiana HOM05D004998 ORTHO05D006104 2.7e-11 72.8 140 37.1
Glyma.13G337700 Glycine max HOM05D004998 ORTHO05D006104 3.5e-11 72.4 132 39.4
EL10Ac7g16043 Beta vulgaris HOM05D004998 ORTHO05D006104 5.9e-11 71.6 138 38.4
MELO3C025903.2 Cucumis melo HOM05D004998 ORTHO05D006104 7.8e-11 71.2 132 36.4
Gohir.A05G094300 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.3e-10 70.5 131 38.2
TWI75G0636 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 1.3e-10 70.5 141 37.6
Sabra09G0023800 Salix brachista HOM05D004998 ORTHO05D006104 1.7e-10 70.1 132 37.9
Sopen06g001560 Solanum pennellii HOM05D004998 ORTHO05D006104 1.7e-10 70.1 140 36.4
Potri.009G033400 Populus trichocarpa HOM05D004998 ORTHO05D006104 2.3e-10 69.7 133 39.8
THA.LOC104810769 Tarenaya hassleriana HOM05D004998 ORTHO05D006104 2.3e-10 69.7 133 38.3
AUR62009547 Chenopodium quinoa HOM05D004998 ORTHO05D006104 2.9e-10 69.3 137 37.2
arahy.Tifrunner.gnm1.ann1.JSTV8M Arachis hypogaea HOM05D004998 ORTHO05D006104 3.8e-10 68.9 143 35.0
Duzib168G2185 Durio zibethinus HOM05D004998 ORTHO05D006104 3.8e-10 68.9 131 37.4
Os01g0144600 Oryza sativa ssp. japonica HOM05D004998 ORTHO05D006104 3.8e-10 68.9 135 38.5
Solyc06g005600.3 Solanum lycopersicum HOM05D004998 ORTHO05D006104 3.8e-10 68.9 140 36.4
TAR636G1117 Trochodendron aralioides HOM05D004998 ORTHO05D006104 5.0e-10 68.6 142 35.2
QL01p031100 Quercus lobata HOM05D004998 ORTHO05D006104 8.6e-10 67.8 139 38.1
CsaV3_6G016720 Cucumis sativus L. HOM05D004998 ORTHO05D006104 1.1e-09 67.4 133 38.3
Eucgr.B02327 Eucalyptus grandis HOM05D004998 ORTHO05D006104 1.1e-09 67.4 139 35.3
HanXRQChr12g0374241 Helianthus annuus HOM05D004998 ORTHO05D006104 1.1e-09 67.4 131 38.9
Lalb_Chr03g0026531 Lupinus albus HOM05D004998 ORTHO05D006104 1.1e-09 67.4 133 36.8
MD03G1088800 Malus domestica HOM05D004998 ORTHO05D006104 1.1e-09 67.4 141 36.9
MD11G1097800 Malus domestica HOM05D004998 ORTHO05D006104 1.1e-09 67.4 141 36.2
SGA_v2.0_scaffold41G15739 Striga asiatica HOM05D004998 ORTHO05D006104 1.1e-09 67.4 140 37.9
Manes.01G171600 Manihot esculenta HOM05D004998 ORTHO05D006104 1.9e-09 66.6 139 38.8
CiPaw.14G067400 Carya illinoinensis HOM05D004998 ORTHO05D006104 2.5e-09 66.2 137 36.5
AUR62001761 Chenopodium quinoa HOM05D004998 ORTHO05D006104 2.5e-09 66.2 137 36.5
CiPaw.13G091800 Carya illinoinensis HOM05D004998 ORTHO05D006104 3.3e-09 65.9 130 38.5
Sc12g0001370 Simmondsia chinensis HOM05D004998 ORTHO05D006104 3.3e-09 65.9 136 36.0
arahy.Tifrunner.gnm1.ann1.AD2TJP Arachis hypogaea HOM05D004998 ORTHO05D006104 4.3e-09 65.5 139 36.0
Gohir.D05G094800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 4.3e-09 65.5 132 38.6
COL.COLO4_18543 Corchorus olitorius HOM05D004998 ORTHO05D006104 5.6e-09 65.1 134 38.8
Gorai.009G098000 Gossypium raimondii HOM05D004998 ORTHO05D006104 5.6e-09 65.1 132 38.6
Oeu053883.1 Olea europaea HOM05D004998 ORTHO05D006104 5.6e-09 65.1 142 35.9
Prupe.6G073200 Prunus persica HOM05D004998 ORTHO05D006104 5.6e-09 65.1 138 37.7
Peaxi162Scf00092g01117 Petunia axillaris HOM05D004998 ORTHO05D006104 9.5e-09 64.3 138 34.1
TWI79G0863 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 9.5e-09 64.3 141 35.5
Nn2g13381 Nelumbo nucifera HOM05D004998 ORTHO05D006104 1.2e-08 63.9 142 36.6
Lsat_1_v5_gn_9_23841 Lactuca sativa HOM05D004998 ORTHO05D006104 1.6e-08 63.5 137 35.8
Nitab4.5_0000272g0050 Nicotiana tabacum HOM05D004998 ORTHO05D006104 2.8e-08 62.8 139 38.8
FAN16G3214 Fragaria x ananassa HOM05D004998 ORTHO05D006104 3.6e-08 62.4 140 37.1
FvH4_3g36750 Fragaria vesca HOM05D004998 ORTHO05D006104 6.1e-08 61.6 140 37.1
Ah.08g219770 Amaranthus hybridus HOM05D004998 ORTHO05D006104 8.0e-08 61.2 146 32.9
Carub.0008s2013 Capsella rubella HOM05D004998 ORTHO05D006104 8.0e-08 61.2 138 37.7
Cc01_g13080 Coffea canephora HOM05D004998 ORTHO05D006104 8.0e-08 61.2 139 35.3
FAN21G1380 Fragaria x ananassa HOM05D004998 ORTHO05D006104 8.0e-08 61.2 146 37.0
TAR633G0520 Trochodendron aralioides HOM05D004998 ORTHO05D006104 8.0e-08 61.2 142 32.4
HanXRQChr07g0197281 Helianthus annuus HOM05D004998 ORTHO05D006104 1.4e-07 60.5 133 35.3
Oeu002429.1 Olea europaea HOM05D004998 ORTHO05D006104 1.4e-07 60.5 36 75.0
ECA247G2861 Erigeron canadensis HOM05D004998 ORTHO05D006104 1.8e-07 60.1 142 35.2
FAN11G2014 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.8e-07 60.1 139 36.7
Hund18896 Selenicereus undatus HOM05D004998 ORTHO05D006104 2.3e-07 59.7 146 30.1
AL8G35930 Arabidopsis lyrata HOM05D004998 ORTHO05D006104 3.0e-07 59.3 144 33.3
SalBow3G1756 Salvia bowleyana HOM05D004998 ORTHO05D006104 3.0e-07 59.3 138 33.3
HPP92_006623 Vanilla planifolia HOM05D004998 ORTHO05D006104 3.0e-07 59.3 167 32.3
AT5G59460 Arabidopsis thaliana HOM05D004998 ORTHO05D006104 4.0e-07 58.9 138 37.0
MSTRG.18567 Avicennia marina HOM05D004998 ORTHO05D006104 4.0e-07 58.9 139 34.5
CARHR285830 Cardamine hirsuta HOM05D004998 ORTHO05D006104 4.0e-07 58.9 136 36.0
CDE08G1537 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 5.2e-07 58.5 107 36.4
Medtr4g064210 Medicago truncatula HOM05D004998 ORTHO05D006104 5.2e-07 58.5 37 67.6
Aa31LG1G11810 Aethionema arabicum HOM05D000959 ORTHO05D000775 6.8e-07 58.2 146 33.6
RcHm_v2.0_Chr5g0065711 Rosa chinensis HOM05D004998 ORTHO05D006104 6.8e-07 58.2 140 35.7
CANSAT54G1321 Cannabis sativa HOM05D004998 ORTHO05D006104 8.9e-07 57.8 131 37.4
Dinv06259 Davidia involucrata HOM05D004998 ORTHO05D006104 1.5e-06 57.0 60 46.7
Gohir.A03G043800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 2.6e-06 56.2 127 40.2
Pp3c16_15780 Physcomitrium patens HOM05D004998 ORTHO05D006104 2.6e-06 56.2 145 33.8
Gohir.D03G123600 Gossypium hirsutum HOM05D004998 ORTHO05D006104 3.4e-06 55.8 130 39.2
Haze_24126 Corylus avellana HOM05D004998 ORTHO05D006104 5.8e-06 55.1 31 77.4
Sp6g21150 Schrenkiella parvula HOM05D004998 ORTHO05D006104 7.5e-06 54.7 141 34.0


User provided reference genes

Program Settings