Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30345 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 1.0e-87 326.6 159 100.0
SEGI_34505 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 1.7e-58 229.6 160 71.9
SEGI_41389 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 1.4e-36 156.8 159 46.5
SEGI_03891 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 4.3e-33 145.2 157 44.6
SEGI_07353 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 1.2e-30 137.1 160 43.8
SEGI_16616 Sequoiadendron giganteum HOM05D001922 ORTHO05D001441 6.4e-29 131.3 150 42.0
Eucgr.C03777 Eucalyptus grandis HOM05D001922 ORTHO05D001441 1.8e-15 86.7 161 34.2
Eucgr.C03778 Eucalyptus grandis HOM05D001922 ORTHO05D001441 3.1e-15 85.9 161 34.2
PGR044G1735 Punica granatum HOM05D001922 ORTHO05D001441 5.3e-15 85.1 157 35.7
Mapoly0029s0035 Marchantia polymorpha HOM05D001922 ORTHO05D001441 2.0e-14 83.2 155 29.7
SMO146G0127 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 5.8e-14 81.6 158 28.5
Duzib168G0989 Durio zibethinus HOM05D001922 ORTHO05D001441 9.9e-14 80.9 159 29.6
CiPaw.03G226300 Carya illinoinensis HOM05D001922 ORTHO05D001441 1.3e-13 80.5 152 32.2
PSO210G6528 Papaver somniferum HOM05D001922 ORTHO05D001441 3.8e-13 79.0 169 30.8
RcHm_v2.0_Chr2g0091561 Rosa chinensis HOM05D001922 ORTHO05D001441 3.8e-13 79.0 157 28.0
RcHm_v2.0_Chr2g0091641 Rosa chinensis HOM05D001922 ORTHO05D001441 3.8e-13 79.0 157 28.0
Sc09g0009420 Simmondsia chinensis HOM05D001922 ORTHO05D001441 3.8e-13 79.0 143 32.9
Cfa003197 Carpinus fangiana HOM05D001922 ORTHO05D001441 4.9e-13 78.6 155 31.0
ClCG08G012170 Citrullus lanatus HOM05D001922 ORTHO05D001441 6.4e-13 78.2 153 30.1
RcHm_v2.0_Chr6g0306481 Rosa chinensis HOM05D001922 ORTHO05D001441 6.4e-13 78.2 150 29.3
CiPaw.07G202600 Carya illinoinensis HOM05D001922 ORTHO05D001441 8.4e-13 77.8 153 30.1
Oeu038809.1 Olea europaea HOM05D001922 ORTHO05D001441 1.1e-12 77.4 156 30.8
MELO3C011134.2 Cucumis melo HOM05D001922 ORTHO05D001441 1.4e-12 77.0 154 29.9
Eucgr.C02954 Eucalyptus grandis HOM05D001922 ORTHO05D001441 1.4e-12 77.0 162 30.2
Eucgr.C02972 Eucalyptus grandis HOM05D001922 ORTHO05D001441 1.4e-12 77.0 162 30.2
MSTRG.11692 Avicennia marina HOM05D001922 ORTHO05D001441 2.4e-12 76.3 149 30.2
FvH4_2g35420 Fragaria vesca HOM05D001922 ORTHO05D001441 3.2e-12 75.9 155 31.0
TAR636G2649 Trochodendron aralioides HOM05D001922 ORTHO05D001441 3.2e-12 75.9 153 30.1
Actinidia09443 Actinidia chinensis HOM05D001922 ORTHO05D001441 5.4e-12 75.1 156 30.8
Eucgr.C03768 Eucalyptus grandis HOM05D001922 ORTHO05D001441 5.4e-12 75.1 163 29.4
Eucgr.C03772 Eucalyptus grandis HOM05D001922 ORTHO05D001441 5.4e-12 75.1 163 29.4
FAN15G0048 Fragaria x ananassa HOM05D001922 ORTHO05D001441 5.4e-12 75.1 155 31.0
FAN27G0378 Fragaria x ananassa HOM05D001922 ORTHO05D001441 5.4e-12 75.1 155 31.0
SalBow4G1549 Salvia bowleyana HOM05D001922 ORTHO05D001441 5.4e-12 75.1 165 29.7
FvH4_1g05920 Fragaria vesca HOM05D001922 ORTHO05D001441 7.1e-12 74.7 153 30.1
Thecc.09G102300 Theobroma cacao HOM05D001922 ORTHO05D001441 7.1e-12 74.7 152 28.9
BolC1t00593H Brassica oleracea HOM05D001922 ORTHO05D001441 9.3e-12 74.3 154 29.9
Ciclev10009650m.g Citrus clementina HOM05D001922 ORTHO05D001441 9.3e-12 74.3 159 28.3
FAN19G2389 Fragaria x ananassa HOM05D001922 ORTHO05D001441 9.3e-12 74.3 153 30.1
COL.COLO4_34767 Corchorus olitorius HOM05D001922 ORTHO05D001441 1.2e-11 73.9 156 30.8
Gohir.D13G193300 Gossypium hirsutum HOM05D001922 ORTHO05D001441 1.2e-11 73.9 156 32.1
Prupe.7G221700 Prunus persica HOM05D001922 ORTHO05D001441 1.2e-11 73.9 158 29.7
unitig_0.g2283 Utricularia gibba HOM05D001090 ORTHO05D008663 1.6e-11 73.6 136 30.9
Gorai.013G219300 Gossypium raimondii HOM05D001922 ORTHO05D001441 2.1e-11 73.2 156 32.1
AL4G17440 Arabidopsis lyrata HOM05D001922 ORTHO05D001441 2.7e-11 72.8 157 28.0
FAN18G1617 Fragaria x ananassa HOM05D001922 ORTHO05D001441 2.7e-11 72.8 150 30.7
HanXRQChr11g0352331 Helianthus annuus HOM05D001922 ORTHO05D001441 2.7e-11 72.8 153 30.7
Psat1g046240 Pisum sativum HOM05D001922 ORTHO05D001441 2.7e-11 72.8 155 27.1
A08p17860 Brassica napus HOM05D001922 ORTHO05D001441 3.5e-11 72.4 141 30.5
BolC3t20993H Brassica oleracea HOM05D001922 ORTHO05D001441 3.5e-11 72.4 141 30.5
BraA08t33738Z Brassica rapa HOM05D001922 ORTHO05D001441 3.5e-11 72.4 141 30.5
AUR62021429 Chenopodium quinoa HOM05D001922 ORTHO05D001441 3.5e-11 72.4 153 27.5
Lj1P1172T49 Lonicera japonica HOM05D001922 ORTHO05D001441 3.5e-11 72.4 153 29.4
Manes.07G124900 Manihot esculenta HOM05D003256 ORTHO05D001441 3.5e-11 72.4 136 32.4
A01p05410 Brassica napus HOM05D001922 ORTHO05D001441 4.6e-11 72.0 154 29.9
BraA01t00515Z Brassica rapa HOM05D001922 ORTHO05D001441 4.6e-11 72.0 154 29.9
CsaV3_2G030790 Cucumis sativus L. HOM05D001922 ORTHO05D001441 4.6e-11 72.0 153 28.8
ECA248G2877 Erigeron canadensis HOM05D001922 ORTHO05D001441 4.6e-11 72.0 161 30.4
BcaC09g52086 Brassica carinata HOM05D001922 ORTHO05D001441 6.0e-11 71.6 154 28.6
C01p06010 Brassica napus HOM05D001922 ORTHO05D001441 6.0e-11 71.6 154 28.6
CSS0020504 Camellia sinensis var. sinensis HOM05D001922 ORTHO05D001441 6.0e-11 71.6 153 28.1
CSS0023390 Camellia sinensis var. sinensis HOM05D001922 ORTHO05D001441 6.0e-11 71.6 153 28.1
Gohir.A13G186500 Gossypium hirsutum HOM05D001922 ORTHO05D001441 6.0e-11 71.6 156 31.4
MD02G1061100 Malus domestica HOM05D001922 ORTHO05D001441 6.0e-11 71.6 159 27.0
BolC7t46382H Brassica oleracea HOM05D001922 ORTHO05D001441 7.9e-11 71.2 141 28.4
A03p61620 Brassica napus HOM05D001922 ORTHO05D001441 1.0e-10 70.9 155 28.4
C03p86930 Brassica napus HOM05D001922 ORTHO05D001441 1.0e-10 70.9 139 30.2
THA.LOC104803752 Tarenaya hassleriana HOM05D001922 ORTHO05D001441 1.0e-10 70.9 164 30.5
TPR.G14861 Trifolium pratense HOM05D001922 ORTHO05D001441 1.3e-10 70.5 155 29.7
Migut.F01435 Erythranthe guttata HOM05D003256 ORTHO05D001441 1.7e-10 70.1 135 31.1
LjContig00357g0006095 Lotus japonicus HOM05D003256 ORTHO05D001441 1.7e-10 70.1 134 31.3
Aa31LG5G9850 Aethionema arabicum HOM05D001922 ORTHO05D001441 2.3e-10 69.7 155 29.0
Aa31sc874G10 Aethionema arabicum HOM05D001922 ORTHO05D001441 2.3e-10 69.7 154 28.6
BraA03t15204Z Brassica rapa HOM05D001922 ORTHO05D001441 2.3e-10 69.7 155 28.4
Nn8g39100 Nelumbo nucifera HOM05D001922 ORTHO05D001441 2.3e-10 69.7 161 28.6
SMO203G0066 Selaginella moellendorffii HOM05D001922 ORTHO05D001441 2.3e-10 69.7 131 29.0
TAR383G0055 Trochodendron aralioides HOM05D001922 ORTHO05D001441 2.3e-10 69.7 152 28.3
Dinv27916 Davidia involucrata HOM05D001922 ORTHO05D001441 3.0e-10 69.3 156 28.8
Lsat_1_v5_gn_1_45660 Lactuca sativa HOM05D001922 ORTHO05D001441 3.0e-10 69.3 132 31.8
CSS0012310 Camellia sinensis var. sinensis HOM05D003256 ORTHO05D001441 3.9e-10 68.9 154 27.9
Sabra06G0185100 Salix brachista HOM05D001922 ORTHO05D001441 3.9e-10 68.9 158 29.7
AagrBONN_evm.TU.Sc2ySwM_117.997 Anthoceros agrestis HOM05D003256 ORTHO05D001441 5.1e-10 68.6 152 26.3
Migut.A00189 Erythranthe guttata HOM05D001922 ORTHO05D001441 5.1e-10 68.6 167 26.3
Thhalv10002295m.g Eutrema salsugineum HOM05D001922 ORTHO05D001441 5.1e-10 68.6 156 28.2
Sp7g30640 Schrenkiella parvula HOM05D001922 ORTHO05D001441 5.1e-10 68.6 155 27.7
Aqoxy1G00709 Aquilegia oxysepala HOM05D003256 ORTHO05D001441 6.6e-10 68.2 135 31.1
Sabra18G0044900 Salix brachista HOM05D001922 ORTHO05D001441 6.6e-10 68.2 161 27.3
SMO115G0051 Selaginella moellendorffii HOM05D001922 ORTHO05D001441 6.6e-10 68.2 149 29.5
TAR383G0559 Trochodendron aralioides HOM05D001922 ORTHO05D001441 6.6e-10 68.2 137 29.2
CSS0030450 Camellia sinensis var. sinensis HOM05D003256 ORTHO05D001441 8.7e-10 67.8 154 27.9
Eucgr.C03766 Eucalyptus grandis HOM05D001922 ORTHO05D001441 8.7e-10 67.8 166 28.3
Oeu038811.1 Olea europaea HOM05D000396 ORTHO05D001441 8.7e-10 67.8 141 31.2
Potri.006G236800 Populus trichocarpa HOM05D001922 ORTHO05D001441 8.7e-10 67.8 164 27.4
QL08p062603 Quercus lobata HOM05D003256 ORTHO05D001441 8.7e-10 67.8 139 30.9
FAN20G2890 Fragaria x ananassa HOM05D001922 ORTHO05D001441 1.1e-09 67.4 150 29.3
Cpa.g.sc19.220 Carica papaya HOM05D003256 ORTHO05D001441 1.5e-09 67.0 133 30.1
Manes.03G059750 Manihot esculenta HOM05D001922 ORTHO05D001441 1.5e-09 67.0 156 26.9
Phvul.008G226800 Phaseolus vulgaris HOM05D003256 ORTHO05D001441 1.5e-09 67.0 136 28.7
Thhalv10026440m.g Eutrema salsugineum HOM05D001922 ORTHO05D001441 1.9e-09 66.6 155 27.7
Hma1.2p1_0049F.1_g028420 Hydrangea macrophylla HOM05D001922 ORTHO05D001441 1.9e-09 66.6 132 31.1
TPR.G8048 Trifolium pratense HOM05D003256 ORTHO05D001441 1.9e-09 66.6 134 30.6
AagrBONN_evm.TU.Sc2ySwM_228.237 Anthoceros agrestis HOM05D003256 ORTHO05D001441 2.5e-09 66.2 153 26.1
Aqoxy7G01457 Aquilegia oxysepala HOM05D001922 ORTHO05D001441 2.5e-09 66.2 159 27.7
Eucgr.C03776 Eucalyptus grandis HOM05D001922 ORTHO05D001441 2.5e-09 66.2 159 27.7
Prupe.1G446400 Prunus persica HOM05D001922 ORTHO05D001441 2.5e-09 66.2 155 27.7
Atru.chr12.248 Acer truncatum HOM05D003256 ORTHO05D001441 3.3e-09 65.9 135 28.9
Carub.0004s0555 Capsella rubella HOM05D001922 ORTHO05D001441 3.3e-09 65.9 155 27.1
Potri.018G046100 Populus trichocarpa HOM05D001922 ORTHO05D001441 3.3e-09 65.9 158 26.6
Prupe.1G446600 Prunus persica HOM05D001922 ORTHO05D001441 3.3e-09 65.9 157 26.8
RcHm_v2.0_Chr6g0306471 Rosa chinensis HOM05D001922 ORTHO05D001441 3.3e-09 65.9 151 27.8
DCAR_011785 Daucus carota HOM05D003256 ORTHO05D005659 4.3e-09 65.5 136 26.5
Eucgr.C02948 Eucalyptus grandis HOM05D001922 ORTHO05D001441 4.3e-09 65.5 156 29.5
Eucgr.G03027 Eucalyptus grandis HOM05D003256 ORTHO05D001441 4.3e-09 65.5 137 29.2
Pp3c4_24970 Physcomitrium patens HOM05D001922 ORTHO05D001441 4.3e-09 65.5 136 30.1
Zm00001eb120450 Zea mays HOM05D001922 ORTHO05D001441 4.3e-09 65.5 145 29.0
BcaB08g35218 Brassica carinata HOM05D001922 ORTHO05D001441 5.6e-09 65.1 152 27.6
Dinv34426 Davidia involucrata HOM05D003256 ORTHO05D001441 5.6e-09 65.1 137 29.2
Eucgr.C02967 Eucalyptus grandis HOM05D001922 ORTHO05D001441 7.3e-09 64.7 153 28.1
Eucgr.C03779 Eucalyptus grandis HOM05D001922 ORTHO05D001441 7.3e-09 64.7 163 27.6
Medtr5g081780 Medicago truncatula HOM05D003256 ORTHO05D001441 7.3e-09 64.7 136 30.1
Zm00001eb298000 Zea mays HOM05D003256 ORTHO05D001441 7.3e-09 64.7 130 32.3
Aqoxy7G03885 Aquilegia oxysepala HOM05D001922 ORTHO05D001441 9.6e-09 64.3 160 26.9
COL.COLO4_20989 Corchorus olitorius HOM05D001922 ORTHO05D001441 9.6e-09 64.3 168 26.2
Os05g0201700 Oryza sativa ssp. japonica HOM05D001922 ORTHO05D001441 9.6e-09 64.3 155 26.5
Potri.008G063900 Populus trichocarpa HOM05D003256 ORTHO05D001441 9.6e-09 64.3 135 28.9
Prupe.2G245700 Prunus persica HOM05D003256 ORTHO05D005659 9.6e-09 64.3 136 27.9
Ah.09g230740 Amaranthus hybridus HOM05D001922 ORTHO05D001441 1.3e-08 63.9 154 26.6
Aqoxy1G04094 Aquilegia oxysepala HOM05D001922 ORTHO05D001441 1.3e-08 63.9 162 26.5
FAN10G1586 Fragaria x ananassa HOM05D003256 ORTHO05D001441 1.3e-08 63.9 137 28.5
SGA_v2.0_scaffold103G30016 Striga asiatica HOM05D001922 ORTHO05D001441 1.3e-08 63.9 151 27.8
TAR633G0704 Trochodendron aralioides HOM05D003256 ORTHO05D001441 1.3e-08 63.9 137 29.2
MD01G1146400 Malus domestica HOM05D003256 ORTHO05D001441 1.6e-08 63.5 132 29.5
Psat2g035280 Pisum sativum HOM05D003256 ORTHO05D001441 1.6e-08 63.5 136 27.9
Hma1.2p1_0049F.1_g028440 Hydrangea macrophylla HOM05D001922 ORTHO05D001441 2.1e-08 63.2 151 27.2
THA.LOC104803751 Tarenaya hassleriana HOM05D001922 ORTHO05D001441 2.1e-08 63.2 153 26.8
Thecc.09G047100 Theobroma cacao HOM05D001922 ORTHO05D001441 2.1e-08 63.2 160 28.8
FAN06G1448 Fragaria x ananassa HOM05D003256 ORTHO05D005659 2.8e-08 62.8 137 28.5
SMO367G0825 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 2.8e-08 62.8 148 26.4
Ah.16g105950 Amaranthus hybridus HOM05D001922 ORTHO05D001441 3.6e-08 62.4 150 28.7
Lsat_1_v5_gn_8_12360 Lactuca sativa HOM05D003256 ORTHO05D001441 3.6e-08 62.4 134 30.6
CARHR115470 Cardamine hirsuta HOM05D001922 ORTHO05D001441 4.8e-08 62.0 152 27.0
Hma1.2p1_0026F.1_g016990 Hydrangea macrophylla HOM05D003256 ORTHO05D001441 4.8e-08 62.0 136 30.1
AT2G25770 Arabidopsis thaliana HOM05D001922 ORTHO05D001441 6.2e-08 61.6 152 25.7
FvH4_7g23970 Fragaria vesca HOM05D003256 ORTHO05D001441 6.2e-08 61.6 137 27.7
FAN03G3030 Fragaria x ananassa HOM05D003256 ORTHO05D001441 6.2e-08 61.6 137 27.7
PGR044G2484 Punica granatum HOM05D001922 ORTHO05D001441 6.2e-08 61.6 166 25.9
Sed0024300 Sechium edule HOM05D003256 ORTHO05D001441 6.2e-08 61.6 138 27.5
ClCG07G003930 Citrullus lanatus HOM05D003256 ORTHO05D001441 8.1e-08 61.2 138 26.1
Ciclev10033656m.g Citrus clementina HOM05D003256 ORTHO05D001441 1.1e-07 60.8 138 28.3
MELO3C025149.2 Cucumis melo HOM05D003256 ORTHO05D005659 1.1e-07 60.8 138 27.5
RcHm_v2.0_Chr1g0369311 Rosa chinensis HOM05D003256 ORTHO05D001441 1.1e-07 60.8 137 27.7
A09p55450 Brassica napus HOM05D001922 ORTHO05D001441 1.8e-07 60.1 152 26.3
BraA09t40947Z Brassica rapa HOM05D001922 ORTHO05D001441 1.8e-07 60.1 152 26.3
BcaC07g40846 Brassica carinata HOM05D001922 ORTHO05D001441 2.4e-07 59.7 152 25.7
BolC8t51416H Brassica oleracea HOM05D001922 ORTHO05D001441 2.4e-07 59.7 152 25.7
MD08G1112000 Malus domestica HOM05D001922 ORTHO05D001441 2.4e-07 59.7 133 27.1
Peaxi162Scf00401g00006 Petunia axillaris HOM05D000080 ORTHO05D000053 2.4e-07 59.7 133 27.8
C08p38440 Brassica napus HOM05D001922 ORTHO05D001441 3.1e-07 59.3 152 25.7
MD02G1064000 Malus domestica HOM05D001922 ORTHO05D001441 3.1e-07 59.3 136 28.7
TWI53G0608 Tripterygium wilfordii HOM05D003256 ORTHO05D001441 3.1e-07 59.3 159 28.9
AagrBONN_evm.TU.Sc2ySwM_117.983 Anthoceros agrestis HOM05D003256 ORTHO05D001441 4.0e-07 58.9 153 26.8
Oeu003436.1 Olea europaea HOM05D003256 ORTHO05D001441 4.0e-07 58.9 136 27.9
Pp3c10_23690 Physcomitrium patens HOM05D001922 ORTHO05D001441 4.0e-07 58.9 155 24.5
SMO364G0193 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 4.0e-07 58.9 156 28.2
Pp3c3_3850 Physcomitrium patens HOM05D021802 ORTHO05D001441 5.3e-07 58.5 151 27.8
AagrBONN_evm.TU.Sc2ySwM_228.1829 Anthoceros agrestis HOM05D003256 ORTHO05D001441 6.9e-07 58.2 149 25.5
CsaV3_5G008890 Cucumis sativus L. HOM05D003256 ORTHO05D001441 6.9e-07 58.2 138 26.1
Sp4g05450 Schrenkiella parvula HOM05D001922 ORTHO05D001441 6.9e-07 58.2 157 25.5
COL.COLO4_20987 Corchorus olitorius HOM05D001922 ORTHO05D001441 9.0e-07 57.8 135 28.1
EL10Ac8g18401 Beta vulgaris HOM05D001922 ORTHO05D001441 1.2e-06 57.4 138 26.1
RcHm_v2.0_Chr7g0223821 Rosa chinensis HOM05D001922 ORTHO05D001441 1.5e-06 57.0 121 30.6
Pp3c7_25770 Physcomitrium patens HOM05D021802 ORTHO05D001441 2.0e-06 56.6 151 29.8
Os01g0198900 Oryza sativa ssp. japonica HOM05D001922 ORTHO05D001441 2.6e-06 56.2 161 26.1
SMO364G0633 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 3.4e-06 55.8 156 26.3
Thecc.09G046800 Theobroma cacao HOM05D001922 ORTHO05D001441 3.4e-06 55.8 158 25.3


User provided reference genes

Program Settings