Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30314 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 2.5e-49 198.4 92 100.0
SEGI_21352 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 5.7e-38 160.6 76 94.7
SEGI_28596 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 8.2e-37 156.8 73 97.3
SEGI_02165 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 3.5e-35 151.4 76 90.8
SEGI_11287 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 8.0e-32 140.2 75 92.0
SEGI_21411 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 4.0e-23 111.3 52 96.2
AagrBONN_evm.TU.Sc2ySwM_228.3219 Anthoceros agrestis HOM05D003482 ORTHO05D004194 9.8e-22 106.7 57 80.7
Pp3c5_19100 Physcomitrium patens HOM05D003482 ORTHO05D004194 1.3e-21 106.3 57 77.2
HPP92_015810 Vanilla planifolia HOM05D003482 ORTHO05D004194 1.7e-21 105.9 69 65.2
Pp3c16_18060 Physcomitrium patens HOM05D003482 ORTHO05D004194 2.8e-21 105.1 63 69.8
DCAR_004550 Daucus carota HOM05D003482 ORTHO05D004194 4.8e-21 104.4 65 69.2
Lsat_1_v5_gn_6_15541 Lactuca sativa HOM05D003482 ORTHO05D004194 4.8e-21 104.4 65 69.2
Eucgr.C03989 Eucalyptus grandis HOM05D003482 ORTHO05D004194 6.3e-21 104.0 65 67.7
MBI13_g31548_MAGBIO Magnolia biondii HOM05D003482 ORTHO05D004194 1.1e-20 103.2 57 75.4
PSO423G0073 Papaver somniferum HOM05D003482 ORTHO05D004194 1.1e-20 103.2 65 67.7
PSO596G0002 Papaver somniferum HOM05D003482 ORTHO05D004194 1.1e-20 103.2 65 67.7
PSO755G0001 Papaver somniferum HOM05D003482 ORTHO05D004194 1.1e-20 103.2 65 67.7
MSTRG.11822 Avicennia marina HOM05D003482 ORTHO05D004194 1.4e-20 102.8 65 66.2
CsaV3_3G047320 Cucumis sativus L. HOM05D003482 ORTHO05D004194 1.4e-20 102.8 65 67.7
Lsat_1_v5_gn_5_60380 Lactuca sativa HOM05D003482 ORTHO05D004194 1.4e-20 102.8 65 67.7
CDE05G0655 Ceratophyllum demersum HOM05D003482 ORTHO05D004194 1.8e-20 102.4 57 75.4
Oeu059294.1 Olea europaea HOM05D003482 ORTHO05D004194 1.8e-20 102.4 65 67.7
ECA233G2479 Erigeron canadensis HOM05D003482 ORTHO05D004194 2.4e-20 102.1 65 67.7
Nn8g40986 Nelumbo nucifera HOM05D003482 ORTHO05D004194 2.4e-20 102.1 65 66.2
Ciclev10007354m.g Citrus clementina HOM05D003482 ORTHO05D004194 3.1e-20 101.7 57 73.7
COL.COLO4_18624 Corchorus olitorius HOM05D003482 ORTHO05D004194 3.1e-20 101.7 57 75.4
Dinv11875 Davidia involucrata HOM05D003482 ORTHO05D004194 3.1e-20 101.7 65 66.2
ECA240G1915 Erigeron canadensis HOM05D003482 ORTHO05D004194 3.1e-20 101.7 65 66.2
HanXRQChr13g0411821 Helianthus annuus HOM05D003482 ORTHO05D004194 3.1e-20 101.7 65 66.2
SalBow4G3081 Salvia bowleyana HOM05D003482 ORTHO05D004194 3.1e-20 101.7 65 66.2
GSVIVG01035556001 Vitis vinifera HOM05D003482 ORTHO05D004194 3.1e-20 101.7 57 75.4
CANSAT25G1343 Cannabis sativa HOM05D003482 ORTHO05D004194 4.1e-20 101.3 65 67.7
Hund19390 Selenicereus undatus HOM05D003482 ORTHO05D004194 4.1e-20 101.3 61 72.1
HPP92_015798 Vanilla planifolia HOM05D003482 ORTHO05D004194 4.1e-20 101.3 65 66.2
Zm00001eb272880 Zea mays HOM05D003482 ORTHO05D004194 4.1e-20 101.3 65 61.5
Aqoxy7G02727 Aquilegia oxysepala HOM05D003482 ORTHO05D004194 5.4e-20 100.9 57 75.4
CSS0039275 Camellia sinensis var. sinensis HOM05D003482 ORTHO05D004194 5.4e-20 100.9 57 73.7
Gohir.A05G066000 Gossypium hirsutum HOM05D003482 ORTHO05D004194 5.4e-20 100.9 57 75.4
Gohir.D05G068400 Gossypium hirsutum HOM05D003482 ORTHO05D004194 5.4e-20 100.9 57 75.4
Gorai.009G069300 Gossypium raimondii HOM05D003482 ORTHO05D004194 5.4e-20 100.9 57 75.4
Lj7C753G1 Lonicera japonica HOM05D003482 ORTHO05D004194 5.4e-20 100.9 57 73.7
Os06g0701300 Oryza sativa ssp. japonica HOM05D003482 ORTHO05D004194 5.4e-20 100.9 57 71.9
Sed0005804 Sechium edule HOM05D003482 ORTHO05D004194 5.4e-20 100.9 65 67.7
Sc14g0002010 Simmondsia chinensis HOM05D003482 ORTHO05D004194 5.4e-20 100.9 65 69.2
vmacro05100 Vaccinium macrocarpon HOM05D003482 ORTHO05D004194 5.4e-20 100.9 65 64.6
Actinidia14155 Actinidia chinensis HOM05D003482 ORTHO05D004194 7.0e-20 100.5 57 70.2
ClCG11G013930 Citrullus lanatus HOM05D003482 ORTHO05D004194 7.0e-20 100.5 57 73.7
Mapoly0007s0194 Marchantia polymorpha HOM05D003482 ORTHO05D004194 7.0e-20 100.5 57 77.2
PGR044G0156 Punica granatum HOM05D003482 ORTHO05D004194 7.0e-20 100.5 57 75.4
QL12p026010 Quercus lobata HOM05D003482 ORTHO05D004194 7.0e-20 100.5 57 73.7
TWI32G0788 Tripterygium wilfordii HOM05D003482 ORTHO05D004194 7.0e-20 100.5 65 66.2
Atru.chr7.2677 Acer truncatum HOM05D003482 ORTHO05D004194 9.1e-20 100.1 57 73.7
MELO3C003597.2 Cucumis melo HOM05D003482 ORTHO05D004194 9.1e-20 100.1 57 73.7
Duzib168G0916 Durio zibethinus HOM05D003482 ORTHO05D004194 9.1e-20 100.1 57 71.9
Rhsim07G0170800 Rhododendron simsii HOM05D003482 ORTHO05D004194 9.1e-20 100.1 57 71.9
SGA_v2.0_scaffold27G11648 Striga asiatica HOM05D003482 ORTHO05D004194 9.1e-20 100.1 65 64.6
Migut.A00459 Erythranthe guttata HOM05D003482 ORTHO05D004194 1.2e-19 99.8 65 64.6
CiPaw.07G208900 Carya illinoinensis HOM05D003482 ORTHO05D004194 1.6e-19 99.4 57 73.7
Solyc08g074280.4 Solanum lycopersicum HOM05D003482 ORTHO05D004194 1.6e-19 99.4 65 66.2
Thecc.09G004000 Theobroma cacao HOM05D003482 ORTHO05D004194 1.6e-19 99.4 57 71.9
TAR626G0827 Trochodendron aralioides HOM05D003482 ORTHO05D004194 1.6e-19 99.4 57 73.7
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 1.6e-19 99.4 57 73.7
Manes.16G137200 Manihot esculenta HOM05D003482 ORTHO05D004194 2.0e-19 99.0 57 71.9
Prupe.1G455100 Prunus persica HOM05D003482 ORTHO05D004194 2.0e-19 99.0 57 71.9
Sopen08g022930 Solanum pennellii HOM05D003482 ORTHO05D004194 2.0e-19 99.0 65 64.6
Cpa.g.sc328.6 Carica papaya HOM05D003482 ORTHO05D004194 2.7e-19 98.6 57 71.9
Cfa013321 Carpinus fangiana HOM05D003482 ORTHO05D004194 2.7e-19 98.6 57 71.9
Nitab4.5_0000970g0010 Nicotiana tabacum HOM05D003482 ORTHO05D004194 2.7e-19 98.6 65 66.2
SMO353G0165 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 2.7e-19 98.6 57 70.2
TAR506G0002 Trochodendron aralioides HOM05D003482 ORTHO05D004194 2.7e-19 98.6 57 73.7
CAN.G195.3 Capsicum annuum HOM05D003482 ORTHO05D004194 3.5e-19 98.2 65 66.2
Glyma.14G139800 Glycine max HOM05D003482 ORTHO05D004194 3.5e-19 98.2 57 71.9
Glyma.17G188300 Glycine max HOM05D003482 ORTHO05D004194 3.5e-19 98.2 57 71.9
Lalb_Chr14g0362391 Lupinus albus HOM05D003482 ORTHO05D004194 3.5e-19 98.2 57 73.7
Manes.03G001800 Manihot esculenta HOM05D003482 ORTHO05D004194 3.5e-19 98.2 57 70.2
Peaxi162Scf00213g01025 Petunia axillaris HOM05D003482 ORTHO05D004194 3.5e-19 98.2 65 66.2
ATR0626G323 Amborella trichopoda HOM05D003482 ORTHO05D004194 4.5e-19 97.8 63 66.7
EL10Ac2g03705 Beta vulgaris HOM05D003482 ORTHO05D004194 4.5e-19 97.8 57 75.4
HanXRQChr03g0081371 Helianthus annuus HOM05D003482 ORTHO05D004194 4.5e-19 97.8 65 63.1
HanXRQChr03g0082881 Helianthus annuus HOM05D003482 ORTHO05D004194 4.5e-19 97.8 65 64.6
MD08G1123100 Malus domestica HOM05D003482 ORTHO05D004194 4.5e-19 97.8 57 70.2
MD15G1101900 Malus domestica HOM05D003482 ORTHO05D004194 4.5e-19 97.8 59 66.1
Nitab4.5_0000919g0060 Nicotiana tabacum HOM05D003482 ORTHO05D004194 4.5e-19 97.8 65 64.6
THA.LOC104814963 Tarenaya hassleriana HOM05D003482 ORTHO05D004194 4.5e-19 97.8 57 71.9
Medtr1g008980 Medicago truncatula HOM05D003482 ORTHO05D004194 5.9e-19 97.4 57 73.7
Phvul.001G077100 Phaseolus vulgaris HOM05D003482 ORTHO05D004194 5.9e-19 97.4 57 71.9
Psat6g006000 Pisum sativum HOM05D003482 ORTHO05D004194 5.9e-19 97.4 57 73.7
A06p35580 Brassica napus HOM05D003482 ORTHO05D004194 7.7e-19 97.1 57 70.2
C07p42960 Brassica napus HOM05D003482 ORTHO05D004194 7.7e-19 97.1 57 70.2
BolC7t44825H Brassica oleracea HOM05D003482 ORTHO05D004194 7.7e-19 97.1 57 70.2
BraA06t26483Z Brassica rapa HOM05D003482 ORTHO05D004194 7.7e-19 97.1 57 70.2
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 1.0e-18 96.7 57 75.4
arahy.Tifrunner.gnm1.ann1.N6E37M Arachis hypogaea HOM05D003482 ORTHO05D004194 1.0e-18 96.7 57 70.2
BcaB07g29924 Brassica carinata HOM05D003482 ORTHO05D004194 1.0e-18 96.7 57 70.2
BcaC03g17943 Brassica carinata HOM05D003482 ORTHO05D004194 1.0e-18 96.7 57 70.2
A02p40080 Brassica napus HOM05D003482 ORTHO05D004194 1.0e-18 96.7 57 70.2
C02p60040 Brassica napus HOM05D003482 ORTHO05D004194 1.0e-18 96.7 57 70.2
BolC2t12059H Brassica oleracea HOM05D003482 ORTHO05D004194 1.0e-18 96.7 57 70.2
BraA02t08971Z Brassica rapa HOM05D003482 ORTHO05D004194 1.0e-18 96.7 57 70.2
Thhalv10003586m.g Eutrema salsugineum HOM05D003482 ORTHO05D004194 1.0e-18 96.7 57 70.2
MD15G1100800 Malus domestica HOM05D003482 ORTHO05D004194 1.0e-18 96.7 57 68.4
Sp2g22640 Schrenkiella parvula HOM05D003482 ORTHO05D004194 1.0e-18 96.7 57 70.2
Carub.0006s2266 Capsella rubella HOM05D003482 ORTHO05D004194 1.3e-18 96.3 57 70.2
Ca_12826_v3 Cicer arietinum L. HOM05D003482 ORTHO05D004194 1.7e-18 95.9 57 71.9
Lj1g0006594 Lotus japonicus HOM05D003482 ORTHO05D004194 1.7e-18 95.9 57 70.2
Hund03269 Selenicereus undatus HOM05D003482 ORTHO05D004194 1.7e-18 95.9 65 64.6
Aa31LG11G4020 Aethionema arabicum HOM05D003482 ORTHO05D004194 2.2e-18 95.5 57 70.2
FvH4_2g36370 Fragaria vesca HOM05D003482 ORTHO05D004194 2.2e-18 95.5 57 68.4
FAN15G0261 Fragaria x ananassa HOM05D003482 ORTHO05D004194 2.2e-18 95.5 57 68.4
FAN20G1504 Fragaria x ananassa HOM05D003482 ORTHO05D004194 2.2e-18 95.5 57 68.4
FAN27G0167 Fragaria x ananassa HOM05D003482 ORTHO05D004194 2.2e-18 95.5 57 68.4
RcHm_v2.0_Chr6g0305511 Rosa chinensis HOM05D003482 ORTHO05D004194 2.2e-18 95.5 57 68.4
BcaNung01256 Brassica carinata HOM05D003482 ORTHO05D004194 2.9e-18 95.1 57 68.4
Sabra06G0214300 Salix brachista HOM05D003482 ORTHO05D004194 2.9e-18 95.1 61 65.6
Lalb_Chr22g0361011 Lupinus albus HOM05D003482 ORTHO05D004194 3.8e-18 94.7 57 71.9
AL6G36450 Arabidopsis lyrata HOM05D003482 ORTHO05D004194 5.0e-18 94.4 57 68.4
AT5G24810 Arabidopsis thaliana HOM05D003482 ORTHO05D004194 5.0e-18 94.4 57 68.4
CARHR188650 Cardamine hirsuta HOM05D003482 ORTHO05D004194 5.0e-18 94.4 57 68.4
Sabra18G0002200 Salix brachista HOM05D003482 ORTHO05D004194 5.0e-18 94.4 57 68.4
Sabra18G0009100 Salix brachista HOM05D003482 ORTHO05D004194 5.0e-18 94.4 57 68.4
CBR_g4189 Chara braunii HOM05D003482 ORTHO05D004194 8.5e-18 93.6 63 63.5
Potri.018G003600 Populus trichocarpa HOM05D003482 ORTHO05D004194 8.5e-18 93.6 57 66.7
Potri.018G003400 Populus trichocarpa HOM05D003482 ORTHO05D004194 1.5e-17 92.8 57 66.7
Potri.018G000101 Populus trichocarpa HOM05D003482 ORTHO05D004194 4.2e-17 91.3 56 66.1
Potri.006G276600 Populus trichocarpa HOM05D003482 ORTHO05D004194 5.5e-17 90.9 57 64.9
COL.COLO4_18622 Corchorus olitorius HOM05D003482 ORTHO05D004194 9.5e-17 90.1 62 61.3
SMO353G0164 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 4.7e-16 87.8 74 54.1
arahy.Tifrunner.gnm1.ann1.21Z9DD Arachis hypogaea HOM05D003482 ORTHO05D004194 6.8e-15 84.0 85 49.4
MELO3C031142.2 Cucumis melo HOM05D003482 ORTHO05D004194 1.2e-08 63.2 35 65.7


User provided reference genes

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