Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30310 Sequoiadendron giganteum HOM05D059367 ORTHO05D386732 1.7e-114 416.0 210 100.0
SEGI_15935 Sequoiadendron giganteum HOM05D059367 ORTHO05D384589 9.7e-25 117.9 107 58.9
SEGI_00772 Sequoiadendron giganteum HOM05D005231 ORTHO05D006387 1.6e-24 117.1 199 41.2
SEGI_37350 Sequoiadendron giganteum HOM05D005231 ORTHO05D006387 9.7e-17 91.3 91 57.1
MBI16_g09338_MAGBIO Magnolia biondii HOM05D000290 ORTHO05D008298 5.7e-09 65.5 82 46.3
SEGI_36661 Sequoiadendron giganteum HOM05D001164 ORTHO05D018381 5.7e-09 65.5 102 41.2
TAR383G0030 Trochodendron aralioides HOM05D000290 ORTHO05D008298 7.4e-09 65.1 79 48.1
CiPaw.07G233600 Carya illinoinensis HOM05D000290 ORTHO05D008298 9.7e-09 64.7 89 47.2
Duzib168G0098 Durio zibethinus HOM05D000290 ORTHO05D008298 9.7e-09 64.7 90 44.4
GSVIVG01036033001 Vitis vinifera HOM05D000290 ORTHO05D008298 9.7e-09 64.7 85 45.9
EL10Ac2g02437 Beta vulgaris HOM05D000290 ORTHO05D008298 1.3e-08 64.3 82 50.0
AUR62037695 Chenopodium quinoa HOM05D000290 ORTHO05D008298 1.3e-08 64.3 78 50.0
CANSAT25G2474 Cannabis sativa HOM05D000290 ORTHO05D008298 2.2e-08 63.5 84 44.0
COL.COLO4_18991 Corchorus olitorius HOM05D000290 ORTHO05D008298 3.7e-08 62.8 90 41.1
Atru.BG.5.p Acer truncatum HOM05D000290 ORTHO05D008298 4.8e-08 62.4 90 43.3
Gorai.009G065400 Gossypium raimondii HOM05D000290 ORTHO05D008298 4.8e-08 62.4 82 48.8
ATR0580G105 Amborella trichopoda HOM05D000290 ORTHO05D008298 6.3e-08 62.0 81 45.7
Cfa013005 Carpinus fangiana HOM05D000290 ORTHO05D008298 6.3e-08 62.0 87 42.5
Haze_21360 Corylus avellana HOM05D000290 ORTHO05D008298 6.3e-08 62.0 87 42.5
Haze_21366 Corylus avellana HOM05D000290 ORTHO05D008298 6.3e-08 62.0 87 42.5
Dinv10141 Davidia involucrata HOM05D000290 ORTHO05D008298 6.3e-08 62.0 87 43.7
PGR044G1628 Punica granatum HOM05D000290 ORTHO05D008298 6.3e-08 62.0 82 43.9
Actinidia14143 Actinidia chinensis HOM05D000290 ORTHO05D008298 1.1e-07 61.2 81 45.7
AUR62020309 Chenopodium quinoa HOM05D000290 ORTHO05D008298 1.1e-07 61.2 61 54.1
CAN.G273.8 Capsicum annuum HOM05D000290 ORTHO05D008298 1.4e-07 60.8 82 47.6
Cpa.g.sc40.20 Carica papaya HOM05D000290 ORTHO05D008298 1.4e-07 60.8 116 37.9
ClCG08G013850 Citrullus lanatus HOM05D000290 ORTHO05D008298 1.4e-07 60.8 82 43.9
Migut.E01437 Erythranthe guttata HOM05D000290 ORTHO05D008298 1.4e-07 60.8 79 44.3
Gohir.A05G062200 Gossypium hirsutum HOM05D000290 ORTHO05D008298 1.4e-07 60.8 82 48.8
Medtr3g105760 Medicago truncatula HOM05D000290 ORTHO05D008298 1.4e-07 60.8 86 41.9
HanXRQChr17g0537191 Helianthus annuus HOM05D000290 ORTHO05D008298 1.8e-07 60.5 83 44.6
Lj7C741G3 Lonicera japonica HOM05D000290 ORTHO05D008298 1.8e-07 60.5 79 48.1
Sp2g22500 Schrenkiella parvula HOM05D000290 ORTHO05D008298 1.8e-07 60.5 83 45.8
Sc23g0006290 Simmondsia chinensis HOM05D000290 ORTHO05D008298 1.8e-07 60.5 131 34.4
CARHR188460 Cardamine hirsuta HOM05D000290 ORTHO05D008298 2.4e-07 60.1 83 44.6
DCAR_024369 Daucus carota HOM05D000290 ORTHO05D008298 2.4e-07 60.1 61 54.1
Mapoly0011s0039 Marchantia polymorpha HOM05D000290 ORTHO05D008298 2.4e-07 60.1 57 54.4
QL02p017911 Quercus lobata HOM05D000290 ORTHO05D008298 2.4e-07 60.1 82 43.9
Gohir.D06G105800 Gossypium hirsutum HOM05D000290 ORTHO05D008298 3.1e-07 59.7 83 45.8
Solyc08g068920.4 Solanum lycopersicum HOM05D000290 ORTHO05D008298 3.1e-07 59.7 79 48.1
Sopen08g022600 Solanum pennellii HOM05D000290 ORTHO05D008298 3.1e-07 59.7 79 48.1
vmacro05114 Vaccinium macrocarpon HOM05D000290 ORTHO05D008298 3.1e-07 59.7 82 46.3
HPP92_021959 Vanilla planifolia HOM05D000290 ORTHO05D008298 3.1e-07 59.7 87 41.4
A02p39990 Brassica napus HOM05D000290 ORTHO05D008298 4.1e-07 59.3 71 47.9
C02p59880 Brassica napus HOM05D000290 ORTHO05D008298 4.1e-07 59.3 83 44.6
BraA02t08962Z Brassica rapa HOM05D000290 ORTHO05D008298 4.1e-07 59.3 71 47.9
CSS0024666 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D008298 4.1e-07 59.3 61 52.5
Nitab4.5_0000341g0060 Nicotiana tabacum HOM05D000290 ORTHO05D008298 4.1e-07 59.3 79 48.1
TPR.G1883 Trifolium pratense HOM05D000290 ORTHO05D008298 4.1e-07 59.3 86 41.9
AL6G36630 Arabidopsis lyrata HOM05D000290 ORTHO05D008298 5.3e-07 58.9 83 43.4
BolC2t12046H Brassica oleracea HOM05D000290 ORTHO05D008298 5.3e-07 58.9 83 44.6
MELO3C011316.2 Cucumis melo HOM05D000290 ORTHO05D008298 5.3e-07 58.9 83 43.4
Lsat_1_v5_gn_3_23500 Lactuca sativa HOM05D000290 ORTHO05D008298 5.3e-07 58.9 84 42.9
Manes.03G006200 Manihot esculenta HOM05D000290 ORTHO05D008298 5.3e-07 58.9 88 42.0
Rhsim07G0167800 Rhododendron simsii HOM05D000290 ORTHO05D008298 5.3e-07 58.9 82 46.3
unitig_46.g18220 Utricularia gibba HOM05D000290 ORTHO05D008298 5.3e-07 58.9 84 41.7
HPP92_021994 Vanilla planifolia HOM05D000290 ORTHO05D008298 5.3e-07 58.9 87 41.4
Aa31LG11G4140 Aethionema arabicum HOM05D000290 ORTHO05D008298 7.0e-07 58.5 77 41.6
Duzib187G0924 Durio zibethinus HOM05D000223 ORTHO05D008298 7.0e-07 58.5 80 43.8
Thhalv10003765m.g Eutrema salsugineum HOM05D000290 ORTHO05D008298 7.0e-07 58.5 96 39.6
FvH4_2g41400 Fragaria vesca HOM05D000290 ORTHO05D008298 7.0e-07 58.5 82 43.9
FAN15G2489 Fragaria x ananassa HOM05D000290 ORTHO05D008298 7.0e-07 58.5 82 43.9
FAN27G0560 Fragaria x ananassa HOM05D000290 ORTHO05D008298 7.0e-07 58.5 82 43.9
Oeu006853.1 Olea europaea HOM05D000290 ORTHO05D008298 7.0e-07 58.5 66 50.0
THA.LOC104803329 Tarenaya hassleriana HOM05D000290 ORTHO05D008298 7.0e-07 58.5 78 42.3
AT5G24970 Arabidopsis thaliana HOM05D000290 ORTHO05D008298 9.1e-07 58.2 83 43.4
BcaC03g17932 Brassica carinata HOM05D000290 ORTHO05D008298 9.1e-07 58.2 61 50.8
Eucgr.C04023 Eucalyptus grandis HOM05D000290 ORTHO05D008298 9.1e-07 58.2 81 44.4
Phvul.009G085500 Phaseolus vulgaris HOM05D000290 ORTHO05D008298 9.1e-07 58.2 86 40.7
Sed0026921 Sechium edule HOM05D000290 ORTHO05D008298 9.1e-07 58.2 83 42.2
VMungo1309G1149 Vigna mungo HOM05D000290 ORTHO05D008298 9.1e-07 58.2 86 40.7
A06p35730 Brassica napus HOM05D000290 ORTHO05D008298 1.2e-06 57.8 83 43.4
C07p42810 Brassica napus HOM05D000290 ORTHO05D008298 1.2e-06 57.8 83 43.4
BolC7t44809H Brassica oleracea HOM05D000290 ORTHO05D008298 1.2e-06 57.8 83 43.4
Glyma.04G059100 Glycine max HOM05D000290 ORTHO05D008298 1.2e-06 57.8 86 40.7
AagrBONN_evm.TU.Sc2ySwM_228.536__537 Anthoceros agrestis HOM05D000290 ORTHO05D008298 1.5e-06 57.4 42 59.5
Glyma.06G059800 Glycine max HOM05D000290 ORTHO05D008298 1.5e-06 57.4 91 39.6
Lj1g0014218 Lotus japonicus HOM05D000290 ORTHO05D008298 1.5e-06 57.4 82 42.7
PSO063G1469 Papaver somniferum HOM05D000290 ORTHO05D008298 1.5e-06 57.4 78 43.6
Ciclev10010214m.g Citrus clementina HOM05D000290 ORTHO05D008298 2.0e-06 57.0 91 39.6
Gorai.010G120400 Gossypium raimondii HOM05D000290 ORTHO05D008298 2.0e-06 57.0 83 43.4
PSO170G1117 Papaver somniferum HOM05D000290 ORTHO05D008298 2.0e-06 57.0 78 43.6
Cc00_g02670 Coffea canephora HOM05D000290 ORTHO05D008298 2.6e-06 56.6 80 43.8
RcHm_v2.0_Chr6g0299071 Rosa chinensis HOM05D000290 ORTHO05D008298 2.6e-06 56.6 79 44.3
SGA_v2.0_scaffold4G02159 Striga asiatica HOM05D000290 ORTHO05D008298 2.6e-06 56.6 85 41.2
Carub.0006s2283 Capsella rubella HOM05D000290 ORTHO05D008298 3.5e-06 56.2 94 39.4
Gohir.A06G104000 Gossypium hirsutum HOM05D000290 ORTHO05D008298 3.5e-06 56.2 83 44.6
BraA06t26497Z Brassica rapa HOM05D000290 ORTHO05D008298 4.5e-06 55.8 95 37.9
Ca_15791_v3 Cicer arietinum L. HOM05D000290 ORTHO05D008298 4.5e-06 55.8 86 39.5
CsaV3_2G032630 Cucumis sativus L. HOM05D000290 ORTHO05D008298 4.5e-06 55.8 83 42.2
MD08G1050200 Malus domestica HOM05D000290 ORTHO05D008298 4.5e-06 55.8 85 38.8
SMO356G0127 Selaginella moellendorffii HOM05D000290 ORTHO05D008298 4.5e-06 55.8 66 45.5
Pp3c21_15420 Physcomitrium patens HOM05D000290 ORTHO05D008298 7.7e-06 55.1 77 42.9
Prupe.1G398500 Prunus persica HOM05D000290 ORTHO05D008298 7.7e-06 55.1 78 41.0
Zm00001eb306580 Zea mays HOM05D000290 ORTHO05D008298 7.7e-06 55.1 61 47.5


User provided reference genes

Program Settings