Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30189 Sequoiadendron giganteum HOM05D004220 ORTHO05D006217 6.1e-222 773.9 395 100.0
ATR0763G027 Amborella trichopoda HOM05D004220 ORTHO05D006217 2.3e-168 595.9 362 82.9
PGSC0003DMG400022796 Solanum tuberosum HOM05D004220 ORTHO05D006217 2.3e-168 595.9 366 81.7
Nn4g24652 Nelumbo nucifera HOM05D004220 ORTHO05D006217 1.1e-167 593.6 348 84.2
Nitab4.5_0000640g0100 Nicotiana tabacum HOM05D004220 ORTHO05D006217 2.5e-167 592.4 345 84.9
Solyc01g005250.4 Solanum lycopersicum HOM05D004220 ORTHO05D006217 2.5e-167 592.4 385 78.7
Sopen01g001280 Solanum pennellii HOM05D004220 ORTHO05D006217 2.5e-167 592.4 385 78.7
MSTRG.13631 Avicennia marina HOM05D004220 ORTHO05D006217 1.6e-166 589.7 347 85.3
Actinidia12400 Actinidia chinensis HOM05D004220 ORTHO05D006217 4.7e-166 588.2 357 82.4
SalBow2G3345 Salvia bowleyana HOM05D004220 ORTHO05D006217 4.7e-166 588.2 364 82.7
CDE07G1395 Ceratophyllum demersum HOM05D004220 ORTHO05D006217 1.1e-165 587.0 366 79.8
Oeu044002.1 Olea europaea HOM05D004220 ORTHO05D006217 1.8e-165 586.3 348 84.2
PSO302G0185 Papaver somniferum HOM05D004220 ORTHO05D006217 4.0e-165 585.1 374 79.4
Migut.E00492 Erythranthe guttata HOM05D004220 ORTHO05D006217 1.2e-164 583.6 389 77.9
arahy.Tifrunner.gnm1.ann1.GF1W8W Arachis hypogaea HOM05D004220 ORTHO05D006217 1.5e-164 583.2 347 83.0
PSO541G1847 Papaver somniferum HOM05D004220 ORTHO05D006217 2.0e-164 582.8 374 79.1
SGA_v2.0_scaffold143G35733 Striga asiatica HOM05D004220 ORTHO05D006217 9.9e-164 580.5 348 84.2
SGA_v2.0_scaffold23G10178 Striga asiatica HOM05D004220 ORTHO05D006217 9.9e-164 580.5 389 77.4
Lsat_1_v5_gn_8_35340 Lactuca sativa HOM05D004220 ORTHO05D006217 1.3e-163 580.1 355 81.4
Mapoly0086s0044 Marchantia polymorpha HOM05D004220 ORTHO05D006217 1.7e-163 579.7 373 77.7
AagrBONN_evm.TU.Sc2ySwM_368.1674 Anthoceros agrestis HOM05D004220 ORTHO05D006217 2.2e-163 579.3 352 82.7
Dinv26357 Davidia involucrata HOM05D004220 ORTHO05D006217 2.9e-163 578.9 365 80.0
FvH4_4g33450 Fragaria vesca HOM05D004220 ORTHO05D006217 2.9e-163 578.9 347 82.7
FAN07G0058 Fragaria x ananassa HOM05D004220 ORTHO05D006217 6.4e-163 577.8 347 82.4
FAN07G1238 Fragaria x ananassa HOM05D004220 ORTHO05D006217 6.4e-163 577.8 347 82.4
PGR102G3065 Punica granatum HOM05D004220 ORTHO05D006217 6.4e-163 577.8 362 79.6
VMungo0251G0500 Vigna mungo HOM05D004220 ORTHO05D006217 8.4e-163 577.4 347 81.8
AUR62015160 Chenopodium quinoa HOM05D004220 ORTHO05D006217 1.1e-162 577.0 345 84.6
FAN12G0660 Fragaria x ananassa HOM05D004220 ORTHO05D006217 1.1e-162 577.0 347 82.4
TAR371G0933 Trochodendron aralioides HOM05D004220 ORTHO05D006217 1.9e-162 576.2 348 82.5
CAN.G282.120 Capsicum annuum HOM05D004220 ORTHO05D006217 2.4e-162 575.9 345 82.3
Gohir.D13G025700 Gossypium hirsutum HOM05D004220 ORTHO05D006217 2.4e-162 575.9 355 81.7
Gorai.013G028900 Gossypium raimondii HOM05D004220 ORTHO05D006217 2.4e-162 575.9 355 81.7
Dinv18907 Davidia involucrata HOM05D004220 ORTHO05D006217 3.2e-162 575.5 356 80.6
Eucgr.B03437 Eucalyptus grandis HOM05D004220 ORTHO05D006217 3.2e-162 575.5 347 82.1
AUR62017612 Chenopodium quinoa HOM05D004220 ORTHO05D006217 4.2e-162 575.1 345 84.3
Ciclev10015633m.g Citrus clementina HOM05D004220 ORTHO05D006217 5.4e-162 574.7 347 82.1
FAN17G0395 Fragaria x ananassa HOM05D004220 ORTHO05D006217 5.4e-162 574.7 347 81.8
Lalb_Chr05g0222081 Lupinus albus HOM05D004220 ORTHO05D006217 5.4e-162 574.7 348 80.7
RcHm_v2.0_Chr4g0442761 Rosa chinensis HOM05D004220 ORTHO05D006217 5.4e-162 574.7 365 79.2
COL.COLO4_27642 Corchorus olitorius HOM05D004220 ORTHO05D006217 7.1e-162 574.3 347 82.4
MBI05_g37451_MAGBIO Magnolia biondii HOM05D004220 ORTHO05D006217 7.1e-162 574.3 368 79.1
Pp3c5_10760 Physcomitrium patens HOM05D004220 ORTHO05D006217 7.1e-162 574.3 348 81.3
CANSAT78G0088 Cannabis sativa HOM05D004220 ORTHO05D006217 1.2e-161 573.5 383 74.9
Manes.15G135500 Manihot esculenta HOM05D004220 ORTHO05D006217 1.2e-161 573.5 357 80.4
Hund08335 Selenicereus undatus HOM05D004220 ORTHO05D006217 1.2e-161 573.5 347 82.7
Thecc.02G309700 Theobroma cacao HOM05D004220 ORTHO05D006217 1.2e-161 573.5 359 79.9
Glyma.05G240700 Glycine max HOM05D004220 ORTHO05D006217 1.6e-161 573.2 355 78.9
Potri.008G135700 Populus trichocarpa HOM05D004220 ORTHO05D006217 1.6e-161 573.2 347 82.4
TWI74G0333 Tripterygium wilfordii HOM05D004220 ORTHO05D006217 1.6e-161 573.2 355 80.6
Lj4g0025833 Lotus japonicus HOM05D004220 ORTHO05D006217 2.7e-161 572.4 347 80.4
Cpa.g.sc2.184 Carica papaya HOM05D004220 ORTHO05D006217 3.5e-161 572.0 356 80.1
FAN22G0209 Fragaria x ananassa HOM05D004220 ORTHO05D006217 3.5e-161 572.0 397 73.6
LjContig00081g0015221 Lotus japonicus HOM05D004220 ORTHO05D006217 4.6e-161 571.6 347 80.4
Gohir.A13G026900 Gossypium hirsutum HOM05D004220 ORTHO05D006217 6.0e-161 571.2 355 81.1
Sabra08G0103700 Salix brachista HOM05D004220 ORTHO05D006217 6.0e-161 571.2 347 81.6
Potri.010G105300 Populus trichocarpa HOM05D004220 ORTHO05D006217 7.8e-161 570.9 347 81.6
ECA233G3753 Erigeron canadensis HOM05D004220 ORTHO05D006217 1.7e-160 569.7 348 80.5
Lalb_Chr16g0387441 Lupinus albus HOM05D004220 ORTHO05D006217 1.7e-160 569.7 348 80.2
unitig_27.g25162 Utricularia gibba HOM05D004220 ORTHO05D006217 2.3e-160 569.3 371 77.6
Glyma.08G047800 Glycine max HOM05D004220 ORTHO05D006217 3.0e-160 568.9 347 80.4
Atru.chr11.900 Acer truncatum HOM05D004220 ORTHO05D006217 3.9e-160 568.5 347 81.8
Duzib251G0717 Durio zibethinus HOM05D004220 ORTHO05D006217 3.9e-160 568.5 357 80.1
Lalb_Chr09g0330781 Lupinus albus HOM05D004220 ORTHO05D006217 3.9e-160 568.5 363 77.7
Medtr8g105860 Medicago truncatula HOM05D004220 ORTHO05D006217 3.9e-160 568.5 347 80.4
Phvul.002G323900 Phaseolus vulgaris HOM05D004220 ORTHO05D006217 3.9e-160 568.5 347 80.4
DCAR_002675 Daucus carota HOM05D004220 ORTHO05D006217 5.1e-160 568.2 373 77.7
Duzib248G1338 Durio zibethinus HOM05D004220 ORTHO05D006217 6.6e-160 567.8 362 79.0
Lj6A736T83 Lonicera japonica HOM05D004220 ORTHO05D006217 6.6e-160 567.8 348 81.3
AT1G14810 Arabidopsis thaliana HOM05D004220 ORTHO05D006217 8.7e-160 567.4 347 81.3
AL1G26830 Arabidopsis lyrata HOM05D004220 ORTHO05D006217 1.1e-159 567.0 347 81.3
Haze_10865 Corylus avellana HOM05D004220 ORTHO05D006217 1.9e-159 566.2 355 79.7
DCAR_022139 Daucus carota HOM05D004220 ORTHO05D006217 1.9e-159 566.2 368 78.0
Prupe.1G334400 Prunus persica HOM05D004220 ORTHO05D006217 1.9e-159 566.2 384 75.0
Sc17g0004200 Simmondsia chinensis HOM05D004220 ORTHO05D006217 1.9e-159 566.2 349 81.1
HanXRQChr12g0364941 Helianthus annuus HOM05D004220 ORTHO05D006217 2.5e-159 565.8 348 81.6
BcaB02g06550 Brassica carinata HOM05D004220 ORTHO05D006217 3.3e-159 565.5 364 78.6
Gorai.008G170900 Gossypium raimondii HOM05D004220 ORTHO05D006217 3.3e-159 565.5 362 78.2
CARHR015340 Cardamine hirsuta HOM05D004220 ORTHO05D006217 4.3e-159 565.1 361 78.9
ClCG07G005480 Citrullus lanatus HOM05D004220 ORTHO05D006217 5.6e-159 564.7 362 78.2
Gohir.A12G154900 Gossypium hirsutum HOM05D004220 ORTHO05D006217 5.6e-159 564.7 362 77.9
SMO119G0035 Selaginella moellendorffii HOM05D004220 ORTHO05D006217 5.6e-159 564.7 347 81.0
BraA06t24264Z Brassica rapa HOM05D004220 ORTHO05D006217 7.3e-159 564.3 347 81.0
CiPaw.06G053400 Carya illinoinensis HOM05D004220 ORTHO05D006217 7.3e-159 564.3 355 79.7
Potri.010G105000 Populus trichocarpa HOM05D004220 ORTHO05D006217 7.3e-159 564.3 345 81.4
A06p10860 Brassica napus HOM05D004220 ORTHO05D006217 1.3e-158 563.5 347 80.7
Cfa015032 Carpinus fangiana HOM05D004220 ORTHO05D006217 1.3e-158 563.5 355 79.2
Psat4g004640 Pisum sativum HOM05D004220 ORTHO05D006217 1.3e-158 563.5 371 75.7
Carub.0001s1460 Capsella rubella HOM05D004220 ORTHO05D006217 1.6e-158 563.1 347 80.7
QL03p036195 Quercus lobata HOM05D004220 ORTHO05D006217 1.6e-158 563.1 350 80.3
MD13G1019500 Malus domestica HOM05D004220 ORTHO05D006217 2.1e-158 562.8 381 76.1
A08p31810 Brassica napus HOM05D004220 ORTHO05D006217 2.8e-158 562.4 347 80.7
Ca_17252_v3 Cicer arietinum L. HOM05D004220 ORTHO05D006217 2.8e-158 562.4 371 76.0
THA.LOC104805088 Tarenaya hassleriana HOM05D004220 ORTHO05D006217 3.6e-158 562.0 347 80.4
Thhalv10007952m.g Eutrema salsugineum HOM05D004220 ORTHO05D006217 4.8e-158 561.6 347 80.1
Aqoxy6G01748 Aquilegia oxysepala HOM05D004220 ORTHO05D006217 6.2e-158 561.2 348 79.3
BcaB03g13081 Brassica carinata HOM05D004220 ORTHO05D006217 6.2e-158 561.2 347 80.1
C05p12790 Brassica napus HOM05D004220 ORTHO05D006217 6.2e-158 561.2 364 78.0
BcaC07g38762 Brassica carinata HOM05D004220 ORTHO05D006217 8.1e-158 560.8 347 80.1
C08p16920 Brassica napus HOM05D004220 ORTHO05D006217 8.1e-158 560.8 347 80.1
BolC8t49319H Brassica oleracea HOM05D004220 ORTHO05D006217 8.1e-158 560.8 347 80.1
CsaV3_5G014440 Cucumis sativus L. HOM05D004220 ORTHO05D006217 1.4e-157 560.1 347 80.7
MELO3C010427.2 Cucumis melo HOM05D004220 ORTHO05D006217 1.8e-157 559.7 362 77.9
MD16G1017700 Malus domestica HOM05D004220 ORTHO05D006217 1.8e-157 559.7 381 75.6
BraA08t35103Z Brassica rapa HOM05D004220 ORTHO05D006217 2.4e-157 559.3 347 80.1
Sp1g13250 Schrenkiella parvula HOM05D004220 ORTHO05D006217 3.1e-157 558.9 347 79.3
Aa31LG1G290 Aethionema arabicum HOM05D004220 ORTHO05D006217 5.3e-157 558.1 347 80.4
BcaC05g25401 Brassica carinata HOM05D004220 ORTHO05D006217 5.3e-157 558.1 364 77.5
Sed0023691 Sechium edule HOM05D004220 ORTHO05D006217 6.9e-157 557.8 362 77.6
BolC5t30019H Brassica oleracea HOM05D004220 ORTHO05D006217 1.5e-156 556.6 364 77.2
EL10Ac9g22864 Beta vulgaris HOM05D004220 ORTHO05D006217 2.0e-156 556.2 405 72.1
THA.LOC104824123 Tarenaya hassleriana HOM05D004220 ORTHO05D006217 4.5e-156 555.1 345 79.7
Sed0000427 Sechium edule HOM05D004220 ORTHO05D006217 5.8e-156 554.7 362 77.1
Rhsim09G0088900 Rhododendron simsii HOM05D004220 ORTHO05D006217 4.2e-154 548.5 382 74.9
Zm00001eb214360 Zea mays HOM05D004220 ORTHO05D006217 7.9e-153 544.3 362 75.1
unitig_29.g31883 Utricularia gibba HOM05D004220 ORTHO05D006217 1.3e-152 543.5 344 79.4
Os03g0760700 Oryza sativa ssp. japonica HOM05D004220 ORTHO05D006217 1.9e-151 539.7 347 77.2
Gohir.D12G158100 Gossypium hirsutum HOM05D004220 ORTHO05D006217 8.1e-150 534.3 383 71.3
TPR.G19271 Trifolium pratense HOM05D004220 ORTHO05D006217 1.4e-149 533.5 322 81.4
HanXRQChr06g0171081 Helianthus annuus HOM05D004220 ORTHO05D006217 1.6e-145 520.0 357 75.6
Nitab4.5_0000198g0090 Nicotiana tabacum HOM05D004220 ORTHO05D006217 7.9e-145 517.7 294 86.7
Peaxi162Scf00275g00215 Petunia axillaris HOM05D004220 ORTHO05D006217 1.8e-144 516.5 347 76.4
HPP92_001024 Vanilla planifolia HOM05D004220 ORTHO05D006217 1.8e-144 516.5 341 76.8
Ah.05g168430 Amaranthus hybridus HOM05D004220 ORTHO05D006217 3.0e-144 515.8 315 82.9
CBR_g30041 Chara braunii HOM05D004220 ORTHO05D006217 2.5e-143 512.7 369 72.1
TAR622G1230 Trochodendron aralioides HOM05D004220 ORTHO05D006217 5.7e-135 485.0 294 80.3
MCO01G646 Micromonas commoda HOM05D004220 ORTHO05D006217 7.4e-135 484.6 353 69.4
Cre09.g389689 Chlamydomonas reinhardtii HOM05D004220 ORTHO05D006217 7.6e-132 474.6 358 69.3
PRCOL_00000291 Prasinoderma coloniale HOM05D004220 ORTHO05D006217 2.2e-123 446.4 305 72.1
Actinidia36618 Actinidia chinensis HOM05D004220 ORTHO05D006217 4.4e-119 432.2 316 71.5
GSVIVG01011646001 Vitis vinifera HOM05D004220 ORTHO05D006217 1.4e-104 384.0 225 84.4
Cc11_g06980 Coffea canephora HOM05D004220 ORTHO05D006217 1.2e-84 317.8 187 83.4
Nn3g18412 Nelumbo nucifera HOM05D004220 ORTHO05D006217 4.5e-84 315.8 186 85.5
TAR629G1713 Trochodendron aralioides HOM05D004220 ORTHO05D006217 5.1e-67 259.2 174 74.7
TAR629G0578 Trochodendron aralioides HOM05D004220 ORTHO05D006217 4.3e-66 256.1 174 73.6
Aqoxy6G01744 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 1.4e-53 214.5 138 73.2
MD13G1041100 Malus domestica HOM05D004220 ORTHO05D006217 2.7e-52 210.3 236 53.8
BolC8t52095H Brassica oleracea HOM05D004220 ORTHO05D001325 2.1e-49 200.7 118 79.7
C08p45410 Brassica napus HOM05D004220 ORTHO05D001325 8.1e-49 198.7 118 78.8
TAR629G0842 Trochodendron aralioides HOM05D004220 ORTHO05D006217 8.1e-49 198.7 170 62.9
TAR629G3246 Trochodendron aralioides HOM05D004220 ORTHO05D006217 8.1e-49 198.7 170 62.9
Aqoxy2G01924 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 1.1e-48 198.4 125 72.8
Aqoxy7G02277 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 1.7e-46 191.0 121 72.7
BcaC05g25398 Brassica carinata HOM05D000822 ORTHO05D002021 1.1e-45 188.3 177 57.6
RcHm_v2.0_Chr2g0166251 Rosa chinensis HOM05D004220 ORTHO05D006217 4.6e-36 156.4 102 77.5
CsaV3_5G014420 Cucumis sativus L. HOM05D004220 ORTHO05D006217 7.9e-36 155.6 97 78.4
Aqoxy3G02388 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 8.1e-33 145.6 128 57.8
CDE12G0826 Ceratophyllum demersum HOM05D004220 ORTHO05D017372 3.1e-32 143.7 113 62.8
BcaC07g41538 Brassica carinata HOM05D001471 ORTHO05D001325 4.5e-31 139.8 119 64.7
Actinidia36617 Actinidia chinensis HOM05D004220 ORTHO05D006217 1.9e-29 134.4 77 84.4
Aqoxy5G02471 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 5.5e-29 132.9 86 72.1
HanXRQChr08g0220351 Helianthus annuus HOM05D004220 ORTHO05D006217 2.1e-28 131.0 88 72.7
QL03p036261 Quercus lobata HOM05D004220 ORTHO05D006217 2.1e-28 131.0 77 83.1
AL7G45370 Arabidopsis lyrata HOM05D004220 ORTHO05D006217 2.7e-28 130.6 85 75.3
Aqoxy5G02658 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 6.0e-28 129.4 84 71.4
Aqoxy5G02966 Aquilegia oxysepala HOM05D004220 ORTHO05D017372 6.0e-28 129.4 85 70.6
MSTRG.2121 Avicennia marina HOM05D004220 ORTHO05D017372 3.9e-27 126.7 85 71.8
BraA09t39195Z Brassica rapa HOM05D004220 ORTHO05D027881 2.5e-26 124.0 71 81.7
C05p12760 Brassica napus HOM05D004220 ORTHO05D027881 4.8e-25 119.8 67 82.1
A09p36790 Brassica napus HOM05D004220 ORTHO05D027881 4.0e-24 116.7 67 80.6
BraSC56t46400Z Brassica rapa HOM05D004220 ORTHO05D027881 3.4e-23 113.6 72 76.4
TAR633G1096 Trochodendron aralioides HOM05D004220 ORTHO05D000192 2.4e-16 90.9 59 72.9
Actinidia26742 Actinidia chinensis HOM05D004220 ORTHO05D006217 5.3e-16 89.7 52 80.8
BcaB08g34410 Brassica carinata HOM05D001471 ORTHO05D001325 1.2e-15 88.6 81 58.0
Cfa024397 Carpinus fangiana HOM05D004220 ORTHO05D043712 5.0e-14 83.2 393 26.0
HanXRQChr17g0555841 Helianthus annuus HOM05D004220 ORTHO05D006217 1.9e-13 81.3 57 70.2
C09p39400 Brassica napus HOM05D004220 ORTHO05D039209 6.3e-09 66.2 40 87.5


User provided reference genes

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