Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 8.8e-81 303.5 148 100.0
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 1.9e-22 109.8 87 56.3
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 1.3e-20 103.6 91 52.7
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 1.3e-20 103.6 90 52.2
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 1.7e-20 103.2 92 48.9
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 2.3e-20 102.8 91 52.7
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 5.1e-20 101.7 94 48.9
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 5.1e-20 101.7 94 52.1
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 5.1e-20 101.7 91 51.6
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 6.6e-20 101.3 88 54.5
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 6.6e-20 101.3 91 52.7
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 8.6e-20 100.9 91 52.7
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 1.1e-19 100.5 94 50.0
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 1.1e-19 100.5 91 50.5
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 1.1e-19 100.5 91 49.5
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 1.1e-19 100.5 91 47.3
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.5e-19 100.1 91 47.3
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 1.9e-19 99.8 91 49.5
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 3.3e-19 99.0 91 47.3
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.3e-19 99.0 91 48.4
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 4.3e-19 98.6 91 46.2
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 4.3e-19 98.6 87 50.6
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 4.3e-19 98.6 91 48.4
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 7.3e-19 97.8 91 49.5
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 9.5e-19 97.4 80 53.8
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.8e-18 95.9 91 45.1
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 2.8e-18 95.9 90 52.2
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 3.6e-18 95.5 91 46.2
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 3.6e-18 95.5 87 50.6
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 4.7e-18 95.1 88 51.1
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 4.7e-18 95.1 88 51.1
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 4.7e-18 95.1 87 47.1
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 8.1e-18 94.4 91 48.4
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 1.1e-17 94.0 91 46.2
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 1.1e-17 94.0 72 55.6
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 1.8e-17 93.2 89 44.9
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 2.3e-17 92.8 88 48.9
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 3.1e-17 92.4 80 51.2
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 3.1e-17 92.4 88 47.7
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 3.1e-17 92.4 94 43.6
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 3.1e-17 92.4 142 36.6
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 3.1e-17 92.4 88 48.9
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 5.2e-17 91.7 89 42.7
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 1.2e-16 90.5 89 43.8
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 1.2e-16 90.5 88 47.7
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 1.5e-16 90.1 91 45.1
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 1.5e-16 90.1 63 58.7
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 2.0e-16 89.7 89 46.1
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 2.6e-16 89.4 91 42.9
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 2.6e-16 89.4 131 35.1
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 2.6e-16 89.4 87 47.1
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 2.6e-16 89.4 88 47.7
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 5.8e-16 88.2 63 57.1
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 7.5e-16 87.8 88 47.7
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 9.9e-16 87.4 76 51.3
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 9.9e-16 87.4 92 46.7
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 1.3e-15 87.0 94 44.7
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 2.2e-15 86.3 87 42.5
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 2.2e-15 86.3 80 45.0
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 2.2e-15 86.3 77 48.1
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 2.2e-15 86.3 91 46.2
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 2.9e-15 85.9 96 44.8
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.9e-15 85.9 77 50.6
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 2.9e-15 85.9 91 44.0
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 2.9e-15 85.9 88 44.3
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 3.7e-15 85.5 91 48.4
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 3.7e-15 85.5 133 36.1
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 4.9e-15 85.1 82 43.9
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 6.4e-15 84.7 91 40.7
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 6.4e-15 84.7 77 49.4
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 8.3e-15 84.3 91 41.8
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 1.1e-14 84.0 91 41.8
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 1.1e-14 84.0 92 40.2
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 1.1e-14 84.0 61 55.7
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 1.1e-14 84.0 60 58.3
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.4e-14 83.6 91 40.7
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 1.4e-14 83.6 91 40.7
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 1.4e-14 83.6 98 39.8
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 7.1e-14 81.3 117 37.6
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 7.1e-14 81.3 63 52.4
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 9.2e-14 80.9 91 40.7
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 1.2e-13 80.5 88 38.6
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 1.6e-13 80.1 91 39.6
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 2.1e-13 79.7 91 40.7
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 3.5e-13 79.0 94 38.3
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 6.0e-13 78.2 90 37.8
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 6.0e-13 78.2 86 43.0
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.7e-12 76.6 89 39.3
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 1.7e-12 76.6 70 48.6
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 3.0e-12 75.9 72 48.6
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 8.6e-12 74.3 80 42.5
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 1.9e-11 73.2 80 41.2
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 5.6e-11 71.6 100 37.0
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 7.3e-11 71.2 88 39.8
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 7.3e-11 71.2 69 46.4
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 4.7e-10 68.6 93 32.3
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 3.8e-07 58.9 62 46.8


User provided reference genes

Program Settings