Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 0.0e+00 2284.6 1169 100.0
SEGI_32546 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 4.0e-120 437.2 1180 33.0
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 6.2e-105 386.7 1097 31.4
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 1.0e-99 369.4 1123 31.4
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 1.5e-98 365.5 1083 30.1
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 7.4e-90 336.7 1091 28.9
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 6.2e-89 333.6 1086 29.1
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 3.5e-84 317.8 1097 29.1
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 1.8e-83 315.5 1095 28.9
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 1.9e-82 312.0 1080 28.9
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 2.5e-82 311.6 1101 30.0
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 4.3e-82 310.8 1089 28.4
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 9.6e-82 309.7 1082 28.5
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 5.3e-80 303.9 1093 29.2
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 1.2e-79 302.8 1082 29.7
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 1.5e-79 302.4 1089 27.9
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 2.0e-79 302.0 1091 28.9
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 1.0e-78 299.7 1095 28.1
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.7e-78 298.9 1085 27.9
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 8.4e-78 296.6 1085 27.6
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.4e-77 295.8 1085 28.3
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.5e-77 293.9 1086 28.0
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.2e-76 292.7 1081 28.4
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 3.5e-76 291.2 1092 28.2
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 1.5e-74 285.8 1088 27.9
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 2.2e-73 282.0 1094 27.9
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 3.7e-73 281.2 1094 27.8
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 4.8e-73 280.8 1094 28.8
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 1.1e-72 279.6 1085 27.7
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 1.1e-72 279.6 1089 27.3
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 4.1e-72 277.7 1153 27.1
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 6.9e-72 276.9 1075 27.6
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 2.6e-71 275.0 1088 26.9
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 5.9e-71 273.9 1104 27.5
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 1.7e-70 272.3 1087 26.2
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 2.2e-70 271.9 1096 26.3
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 6.5e-70 270.4 1086 25.9
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 8.5e-70 270.0 1093 28.4
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 2.5e-69 268.5 856 29.6
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 3.2e-69 268.1 1084 27.4
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 3.2e-69 268.1 1067 26.2
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 1.2e-68 266.2 1119 27.6
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 1.6e-68 265.8 1083 27.2
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 1.8e-67 262.3 1088 25.7
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 3.9e-67 261.2 1087 27.5
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 5.1e-67 260.8 1011 27.4
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 1.1e-66 259.6 956 28.1
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 1.1e-66 259.6 1137 26.2
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 1.5e-66 259.2 1075 25.7
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 2.5e-66 258.5 1079 27.9
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 4.3e-66 257.7 1108 27.9
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 5.7e-66 257.3 1100 27.0
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 7.4e-66 256.9 1146 26.1
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 9.7e-66 256.5 1088 27.3
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 1.3e-65 256.1 1103 25.8
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 2.2e-65 255.4 1093 27.2
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 3.7e-65 254.6 977 27.4
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 4.8e-65 254.2 1086 26.2
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 1.4e-64 252.7 1091 26.2
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 1.4e-64 252.7 1081 26.2
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 2.4e-64 251.9 950 27.4
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 1.2e-63 249.6 1096 28.0
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 1.5e-63 249.2 1091 26.0
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 1.5e-63 249.2 1081 25.7
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 2.0e-63 248.8 1105 26.7
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 2.6e-63 248.4 1083 27.1
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 3.4e-63 248.1 1083 25.4
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 2.9e-62 245.0 1074 26.6
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 8.5e-62 243.4 1088 26.5
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 8.5e-62 243.4 1088 26.5
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 1.1e-61 243.0 1089 25.7
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 2.5e-61 241.9 1053 24.1
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 5.5e-61 240.7 865 28.3
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 7.2e-61 240.4 1134 26.2
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 2.7e-60 238.4 1080 25.5
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 2.7e-60 238.4 1082 26.5
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 3.6e-60 238.0 1080 25.1
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 4.7e-60 237.7 1100 27.7
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 6.1e-60 237.3 1090 25.9
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 1.0e-59 236.5 1090 26.1
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 6.7e-59 233.8 1085 26.5
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.0e-58 232.3 893 26.9
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 2.0e-58 232.3 1089 25.2
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 1.3e-57 229.6 1073 27.1
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 8.2e-57 226.9 955 27.3
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 2.0e-55 222.2 1095 27.1
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 2.0e-55 222.2 1083 25.9
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 4.5e-55 221.1 1076 24.6
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 4.5e-55 221.1 1076 24.6
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 1.3e-54 219.5 1094 25.0
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 6.5e-54 217.2 1078 25.8
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 2.5e-53 215.3 1101 26.3
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 8.0e-52 210.3 1075 26.1
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 1.4e-51 209.5 988 25.8
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 1.8e-51 209.1 1095 24.7
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 3.0e-51 208.4 904 26.8
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 6.3e-49 200.7 1089 24.3
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 2.3e-43 182.2 1098 24.0
Pp3c15_13500 Physcomitrium patens HOM05D005720 ORTHO05D006984 7.5e-42 177.2 1231 22.0
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 1.3e-41 176.4 465 33.5
Mapoly0039s0001 Marchantia polymorpha HOM05D005720 ORTHO05D006984 1.0e-38 166.8 1132 23.9
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 1.5e-37 162.9 730 26.2
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 2.7e-36 158.7 463 32.4
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 2.7e-36 158.7 977 22.2
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 6.1e-36 157.5 494 28.9
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 2.2e-33 149.1 357 33.1
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 3.7e-33 148.3 694 24.1
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 4.9e-33 147.9 739 26.8
vmacro06588 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.4e-32 146.4 648 25.9
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 1.4e-32 146.4 1057 21.9
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 2.9e-30 138.7 363 33.6
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 1.1e-29 136.7 463 29.8
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 6.1e-28 131.0 371 29.4
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 8.9e-27 127.1 356 30.9
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 2.6e-26 125.6 512 27.7
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 3.7e-25 121.7 316 31.6
BraA10t43127Z Brassica rapa HOM05D005720 ORTHO05D006984 4.1e-24 118.2 316 30.7
Lj3P914T60 Lonicera japonica HOM05D005720 ORTHO05D006984 2.0e-23 115.9 320 28.4
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 6.6e-22 110.9 258 34.5
MBI16_g03131_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 1.5e-21 109.8 370 28.9
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 4.3e-21 108.2 1034 22.5
AagrBONN_evm.TU.Sc2ySwM_362.1777 Anthoceros agrestis HOM05D005720 ORTHO05D006984 6.2e-20 104.4 638 23.7
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 2.3e-19 102.4 285 30.5
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 1.5e-18 99.8 247 31.6
MBI16_g03132_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 1.2e-10 73.6 171 32.7
CBR_g41297 Chara braunii HOM05D005720 ORTHO05D006984 3.7e-09 68.6 356 27.2
AagrBONN_evm.TU.Sc2ySwM_117.1094 Anthoceros agrestis HOM05D005720 ORTHO05D006984 1.1e-08 67.0 276 27.5
SMO367G0167 Selaginella moellendorffii HOM05D000641 ORTHO05D050849 1.1e-08 67.0 261 28.0


User provided reference genes

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